Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0575200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:22138044:22142395:1 gene:Os01g0575200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 024 description:Helix-loop-helix DNA-binding domain containing protein. (Os01t0575200-01)
Sequence	ATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGCATCCAC CAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGCT GCGAGCTTCATCGCCGGCGGCGGCGGCGACAATGCGTGCTTCGACGAGCTCATGGCGGGA GGGTCGTCGGGTGACACTAGGATGGTGGCCATGGACGACGGCGACGACGGGAGTGGCTTC TTGGTGGGGGACGCCGAGGCCGAGCACCTGATGCTGTCGTCCTCGTCGCCGTCGTCGCTC TCCTCGGGCCGCTCCCTCTCCATCGACAGCGCCGGCTCCATGTCCTCCTTCTCGCTCGAC GCCGCCGCGGCGCTGGCGATGTCGACCCTCGCCGTCCCGCACCCGTACCCGCCGCCCGTC GCGCACGGCATGTTCGCCTCCGGCGACGGTGGCGGCGGCGGCGGCGGCGCAGTCGACGAC CACGAGGACGCCATCATGCGTGCCATGATGGCCGTCATCTCCTCCGCCTCGGCCTCCCCC TCCTCCTCGGGCGGCTCCGCCTCCTCGCCCACCCCGTTCAGCCGGGACAGCGGCGCGCAC CACCAGCCTGCAGGTCAGCCAGCCATGGCGGCGCCGCAGCAGCCGCGTGGAGGGAACGGC GGCCACGTGGTGGTGAAGAGCAGCAGCAGCAGCGGCGGCCTCGCCGTGCCGATGGATCAG AAGCCCGGCGGCGGCGGGCGGGGACGGCAGCAGGAGGAGGCGGCGGCGGCGAGCGCCACC AACAGCAGCCAGCTCTACCACATGATGTCGGAGAGGAAGAGGAGGGAGAAGCTCAACGAC AGCTTCCACACGCTCAGATCACTCCTCCCACCTTGCTCCAAGAAGGACAAGACGACGGTG CTGATCAACGCGGCCAAGTACCTCAAGTCGCTGGAGACGGAGATCACGGAGCTGGAAGGG ACGAACACGAAGCTGGAGAAGCACATCGCCGGCGGCGGCGGCGCGGCGGACGCCGCCATG AGGGCTCGCCGGGCGCAGCAGAGGGCCAAGGTGCAGATCAGCAAGGCGGCGGACTCGCAG TCGCAGCAGCTGGTGAGCCTGACGGTGATGGTGATGGTGGAGTGCGACGTGGTGGAGCTG GTGCTCCACATCCTGGAATGCCTCAGGTGGATGAAGGAGATCAGCGTGCTGTCCGTCTAC GCCGACACCTACTCGCCGCAGCTTCTTCTCAAGGCCATCGCCAACATCAAGCTCCAGATC GTGGGAGGAGATTGGAACGAGGCGTCGTTCCACGAGGCGATGACGAAGGCGGCGAACGAC GCGACCATTTCCTGCGCCCCGCTCGCGATCACGGCAGCACAGTGA

Peptide Sequence

PEP ID	Os01t0575200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:22138044:22142395:1 gene:Os01g0575200 transcript:Os01t0575200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 024 description:Helix-loop-helix DNA-binding domain containing protein. (Os01t0575200-01)
Sequence	MDEVWCSLDSMPADIAAGIHQPPPPDLHDPSFWPAFADCAASFIAGGGGDNACFDELMAG GSSGDTRMVAMDDGDDGSGFLVGDAEAEHLMLSSSSPSSLSSGRSLSIDSAGSMSSFSLD AAAALAMSTLAVPHPYPPPVAHGMFASGDGGGGGGGAVDDHEDAIMRAMMAVISSASASP SSSGGSASSPTPFSRDSGAHHQPAGQPAMAAPQQPRGGNGGHVVVKSSSSSGGLAVPMDQ KPGGGGRGRQQEEAAAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTV LINAAKYLKSLETEITELEGTNTKLEKHIAGGGGAADAAMRARRAQQRAKVQISKAADSQ SQQLVSLTVMVMVECDVVELVLHILECLRWMKEISVLSVYADTYSPQLLLKAIANIKLQI VGGDWNEASFHEAMTKAANDATISCAPLAITAAQ

Transcript Sequence

Transcript ID	Os01t0575200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22138044:22142395:1 gene:Os01g0575200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 024 description:Helix-loop-helix DNA-binding domain containing protein. (Os01t0575200-01)
Sequence	AGCTCACCTGCGCTTAGGCTTAGCTAGTACTAATCATCATTAGTGTATAGCTAAGCTAGC TCCATTTCTTGCGCTTCTTGGTTTTGTCTGGGAACTATTGTATAGGTCTATATCGATCTC CATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGCATCCA CCAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGC TGCGAGCTTCATCGCCGGCGGCGGCGGCGACAATGCGTGCTTCGACGAGCTCATGGCGGG AGGGTCGTCGGGTGACACTAGGATGGTGGCCATGGACGACGGCGACGACGGGAGTGGCTT CTTGGTGGGGGACGCCGAGGCCGAGCACCTGATGCTGTCGTCCTCGTCGCCGTCGTCGCT CTCCTCGGGCCGCTCCCTCTCCATCGACAGCGCCGGCTCCATGTCCTCCTTCTCGCTCGA CGCCGCCGCGGCGCTGGCGATGTCGACCCTCGCCGTCCCGCACCCGTACCCGCCGCCCGT CGCGCACGGCATGTTCGCCTCCGGCGACGGTGGCGGCGGCGGCGGCGGCGCAGTCGACGA CCACGAGGACGCCATCATGCGTGCCATGATGGCCGTCATCTCCTCCGCCTCGGCCTCCCC CTCCTCCTCGGGCGGCTCCGCCTCCTCGCCCACCCCGTTCAGCCGGGACAGCGGCGCGCA CCACCAGCCTGCAGGTCAGCCAGCCATGGCGGCGCCGCAGCAGCCGCGTGGAGGGAACGG CGGCCACGTGGTGGTGAAGAGCAGCAGCAGCAGCGGCGGCCTCGCCGTGCCGATGGATCA GAAGCCCGGCGGCGGCGGGCGGGGACGGCAGCAGGAGGAGGCGGCGGCGGCGAGCGCCAC CAACAGCAGCCAGCTCTACCACATGATGTCGGAGAGGAAGAGGAGGGAGAAGCTCAACGA CAGCTTCCACACGCTCAGATCACTCCTCCCACCTTGCTCCAAGAAGGACAAGACGACGGT GCTGATCAACGCGGCCAAGTACCTCAAGTCGCTGGAGACGGAGATCACGGAGCTGGAAGG GACGAACACGAAGCTGGAGAAGCACATCGCCGGCGGCGGCGGCGCGGCGGACGCCGCCAT GAGGGCTCGCCGGGCGCAGCAGAGGGCCAAGGTGCAGATCAGCAAGGCGGCGGACTCGCA GTCGCAGCAGCTGGTGAGCCTGACGGTGATGGTGATGGTGGAGTGCGACGTGGTGGAGCT GGTGCTCCACATCCTGGAATGCCTCAGGTGGATGAAGGAGATCAGCGTGCTGTCCGTCTA CGCCGACACCTACTCGCCGCAGCTTCTTCTCAAGGCCATCGCCAACATCAAGCTCCAGAT CGTGGGAGGAGATTGGAACGAGGCGTCGTTCCACGAGGCGATGACGAAGGCGGCGAACGA CGCGACCATTTCCTGCGCCCCGCTCGCGATCACGGCAGCACAGTGATTGCTGATTAGTGA GTGATTAGCAGCGAGCGGCGGCGGTGGCGACCTACCGGTTAATTCAATCCATCCTCATCG TCCTCGCGCGCGTGCAGTCATGGTTGAACGTTGAAGCAGTAAAAAAAATATTTATGTATG GAGGGCGATGGGTTCGCTACGTCATAACCGATCTCAATAGTTGGAGGAGGAAAACGAGGA CAATTCAAATACTTCGAGAGTGGGGAAGAATATTGTTAGATATATATTAGGGTTTGGTTA TTCATTCCTTTTTCCGTCTTAAAATATAATAAGTTTTGATGATGTATAAACATGTATAAA TATATAGCTAAAAGTTATTATATTTTAGGACGGTGATAGTAATTACGTAGCGTATTTTTC AGGTGTGCCCTAGTTGCAGCCGCAAGCTAGGTTGCAGACGATGGTGCTTTAGTAGCGCTA GCCTAGCTAGTATAGGTATATGTATATGTATATCTCTATGTATATACATGCATGGTGGTG GTTTTGAGTG