Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0575000-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:22123702:22128637:1 gene:Os01g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHD3 description:Root hair defective 3 GTP-binding family protein. (Os01t0575000-01);Root hair defective 3 GTP-binding family protein. (Os01t0575000-02);Similar to Root hair defective 3 GTP-binding protein. (Os01t0575000-03)
Sequence	GGTGTCCCTAAACCCCATGCCCACAAGGAAACTCCACTGAGTGAATTTTTCAATGTCGAA GTTGTGGCCCTATCTAGTTATGAGGAAAAGGAGGAGTTATTCAAAGAGCAGGTTGCCAGT TTAAGAGATAGGTTCCAACAGTCTATTGCTCCTGGTGGACTTGCTGGAGATCGGCGGGGC GTTGTCCCTGCATCTGGTTTCTCTTTCAGTTCACAACAATTTTGGAAGGTCATTAAGGAG AATAAAGACCTTGATCTACCAGCTCATAAAGTTATGGTCGCTACTGTACGCTGTGAGGAA ATCGGTAATGAGAAAATTGCCAGTTTTACAGCTGATGAGGAGTGGCAACAATTTGAGGAA GCTGTTCAACATGATTACGTGCCTGGGTTTGGGAAGAAGATCAGCAACCTTCTTGACAGA TGCTTATCAGAGTATGACATGGAGGCTATTTATTTTGATGAAGGTGTCAGAACTTCGAAA AGGCACCAACTTGAGTCTAAACTTTTGCAGCTTGTCAACCCTGCATACCAAAATATTTTG GATCATTTACGGACTAGAACTTTAGAAGTATTTAAGGAGTCCTTTGACAAGTCCCTAGAA AAGGAGGGTTTTGCTGTTGCTGCTCGTGACTGTACTAAGGTTTTCTTGGAGAAGTTTGAC AAAGGATCCGAAGATGCTGCTATCCAACAAGTGAAATGGGACCCATCAAAAATTAAGGAT AAGCTTAAGCGTGACATTGAGGCGCATGTGGCATCAGTTCGTGCCAAAAAACTATCTGAA CTTTGTTCCAAATACGAGGGACAACTTACCAAGGCACTGGCAGAACCAGTTGAAGCTCTT CTAGATTCAGCCAGTGAAGAAACCTGGCCAGCAATTAGGAAGCTTCTTCAACGCGAGACA AAATCTGCTGTTTCGGGTTTTGAATCTGCCATGGCATCTTTTGAGCTTGATGAGGTGACT CAGAAAGAATTACTTTCAAAGCTGGAGAGTCACGGAAAGAGCGTTGTTGAATCAAAGGCA AAAGAGGAAGCTGCAAGGGTCTTGATTCGGATGAAGGACAGGTTCTCAACACTATTCAGC CGTGATGCTGACTCAATGCCAAGAGTGTGGACCGGAAAGGAGGACATAAAGGCCATTACT AAAACTGCTCGTTCAGCTTCTATGAAGTTGCTTTCTACAATGGCTGCAATTCGATTGGAT GAGGATGGTGACAACATTGAGAACACCCTGTCCCTTGCTCTAGTTGACACAGCAAGGCCA GGGACTACAGATAGGAGCATCCAATCGTTCGATCCACTTGCCTCTAGCTCATGGGAAAGG GTTCCAGAGGAGAAAACTTTAATTACACCTGTCCAGTGCAAATCTTTATGGAGGCAATTT AAGGCTGAAACTGAATATACTGTCACACAGGCCATAGCTGCTCAGGAGGCAAATAAGAGG AACAACAACTGGCTGCCACCTCCATGGGCACTTGCCGCAATGGCTATCCTTGGATTCAAC GAGTTCATGACATTGTTAAAGAATCCCCTTTACCTGGGAGTCATATTTGTTGTTTTCCTT GTTGGAAAAGCCATGTGGGTACAGCTAGACATTGCCAAGGAGTTCCAAAATGGATTTCTT CCAGCCGTCCTATCACTTTCGACGAAATTCGTTCCCACGATAATGAACATCCTGAAGAGA TTAGCTGATGAGGGGCAGAGACCTGCAGCCCCAGAGAGGCAAAGAGAGATGGAACTCCAA CCAAAATCCACAAGGAATGGTTCACACAGCAACGTGACATCGGCAGGGTCATCCAGCATA ACCTCTTCGGAGAGTGGACCCGAATATTCAAGCCCGATTGCACACTGA

Peptide Sequence

PEP ID	Os01t0575000-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:22123702:22128637:1 gene:Os01g0575000 transcript:Os01t0575000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHD3 description:Root hair defective 3 GTP-binding family protein. (Os01t0575000-01);Root hair defective 3 GTP-binding family protein. (Os01t0575000-02);Similar to Root hair defective 3 GTP-binding protein. (Os01t0575000-03)
Sequence	GVPKPHAHKETPLSEFFNVEVVALSSYEEKEELFKEQVASLRDRFQQSIAPGGLAGDRRG VVPASGFSFSSQQFWKVIKENKDLDLPAHKVMVATVRCEEIGNEKIASFTADEEWQQFEE AVQHDYVPGFGKKISNLLDRCLSEYDMEAIYFDEGVRTSKRHQLESKLLQLVNPAYQNIL DHLRTRTLEVFKESFDKSLEKEGFAVAARDCTKVFLEKFDKGSEDAAIQQVKWDPSKIKD KLKRDIEAHVASVRAKKLSELCSKYEGQLTKALAEPVEALLDSASEETWPAIRKLLQRET KSAVSGFESAMASFELDEVTQKELLSKLESHGKSVVESKAKEEAARVLIRMKDRFSTLFS RDADSMPRVWTGKEDIKAITKTARSASMKLLSTMAAIRLDEDGDNIENTLSLALVDTARP GTTDRSIQSFDPLASSSWERVPEEKTLITPVQCKSLWRQFKAETEYTVTQAIAAQEANKR NNNWLPPPWALAAMAILGFNEFMTLLKNPLYLGVIFVVFLVGKAMWVQLDIAKEFQNGFL PAVLSLSTKFVPTIMNILKRLADEGQRPAAPERQREMELQPKSTRNGSHSNVTSAGSSSI TSSESGPEYSSPIAH

Transcript Sequence

Transcript ID	Os01t0575000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:22123702:22128637:1 gene:Os01g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHD3 description:Root hair defective 3 GTP-binding family protein. (Os01t0575000-01);Root hair defective 3 GTP-binding family protein. (Os01t0575000-02);Similar to Root hair defective 3 GTP-binding protein. (Os01t0575000-03)
Sequence	ATGGTGTCCCTAAACCCCATGCCCACAAGGAAACTCCACTGAGTGAATTTTTCAATGTCG AAGTTGTGGCCCTATCTAGTTATGAGGAAAAGGAGGAGTTATTCAAAGAGCAGGTTGCCA GTTTAAGAGATAGGTTCCAACAGTCTATTGCTCCTGGTGGACTTGCTGGAGATCGGCGGG GCGTTGTCCCTGCATCTGGTTTCTCTTTCAGTTCACAACAATTTTGGAAGGTCATTAAGG AGAATAAAGACCTTGATCTACCAGCTCATAAAGTTATGGTCGCTACTGTACGCTGTGAGG AAATCGGTAATGAGAAAATTGCCAGTTTTACAGCTGATGAGGAGTGGCAACAATTTGAGG AAGCTGTTCAACATGATTACGTGCCTGGGTTTGGGAAGAAGATCAGCAACCTTCTTGACA GATGCTTATCAGAGTATGACATGGAGGCTATTTATTTTGATGAAGGTGTCAGAACTTCGA AAAGGCACCAACTTGAGTCTAAACTTTTGCAGCTTGTCAACCCTGCATACCAAAATATTT TGGATCATTTACGGACTAGAACTTTAGAAGTATTTAAGGAGTCCTTTGACAAGTCCCTAG AAAAGGAGGGTTTTGCTGTTGCTGCTCGTGACTGTACTAAGGTTTTCTTGGAGAAGTTTG ACAAAGGATCCGAAGATGCTGCTATCCAACAAGTGAAATGGGACCCATCAAAAATTAAGG ATAAGCTTAAGCGTGACATTGAGGCGCATGTGGCATCAGTTCGTGCCAAAAAACTATCTG AACTTTGTTCCAAATACGAGGGACAACTTACCAAGGCACTGGCAGAACCAGTTGAAGCTC TTCTAGATTCAGCCAGTGAAGAAACCTGGCCAGCAATTAGGAAGCTTCTTCAACGCGAGA CAAAATCTGCTGTTTCGGGTTTTGAATCTGCCATGGCATCTTTTGAGCTTGATGAGGTGA CTCAGAAAGAATTACTTTCAAAGCTGGAGAGTCACGGAAAGAGCGTTGTTGAATCAAAGG CAAAAGAGGAAGCTGCAAGGGTCTTGATTCGGATGAAGGACAGGTTCTCAACACTATTCA GCCGTGATGCTGACTCAATGCCAAGAGTGTGGACCGGAAAGGAGGACATAAAGGCCATTA CTAAAACTGCTCGTTCAGCTTCTATGAAGTTGCTTTCTACAATGGCTGCAATTCGATTGG ATGAGGATGGTGACAACATTGAGAACACCCTGTCCCTTGCTCTAGTTGACACAGCAAGGC CAGGGACTACAGATAGGAGCATCCAATCGTTCGATCCACTTGCCTCTAGCTCATGGGAAA GGGTTCCAGAGGAGAAAACTTTAATTACACCTGTCCAGTGCAAATCTTTATGGAGGCAAT TTAAGGCTGAAACTGAATATACTGTCACACAGGCCATAGCTGCTCAGGAGGCAAATAAGA GGAACAACAACTGGCTGCCACCTCCATGGGCACTTGCCGCAATGGCTATCCTTGGATTCA ACGAGTTCATGACATTGTTAAAGAATCCCCTTTACCTGGGAGTCATATTTGTTGTTTTCC TTGTTGGAAAAGCCATGTGGGTACAGCTAGACATTGCCAAGGAGTTCCAAAATGGATTTC TTCCAGCCGTCCTATCACTTTCGACGAAATTCGTTCCCACGATAATGAACATCCTGAAGA GATTAGCTGATGAGGGGCAGAGACCTGCAGCCCCAGAGAGGCAAAGAGAGATGGAACTCC AACCAAAATCCACAAGGAATGGTTCACACAGCAACGTGACATCGGCAGGGTCATCCAGCA TAACCTCTTCGGAGAGTGGACCCGAATATTCAAGCCCGATTGCACACTGATCAGTTCATC TATAGCTTTTAGCTGAAAACCCCAGCAGTTGTAGTTTCAACGGGTGAGCCTTTGGAGACC GAAGCGCCTTGCAGTTTTTGTAAGCTTGCCCTTCCCCATCTGATGTACGGAGATTCAATG GCCCCAGCCAGAGGTTATTTATGGGATTTTGGGCCCAGGGAGTTTGTTTGTAAGAAACGC TGTAGAATATGTTTTATTTCATTTTTTTTTTGTAACAGCTTATATGATGGTTGTATAGAA GATTTGCGGTTTTATCATCTCAACCCAAGGAGGCCAGGGGAGCACAGCAGTGCATTCTAC ACTACTAAATACAGTTGATTGCATGGACACGAAAAATGTATGTACATGTCTTG