Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0572300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:21992992:21996997:1 gene:Os01g0572300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 11 description:Zinc finger, C2H2-type domain containing protein. (Os01t0572300-01)
Sequence	ATGTTTCATCACCATCTTCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGGAGGAGGATTG TTCTTGGTGGAAGAGGCCGCCGAGGCAGCAGATCAGCAGCAGGAGAGCAGCATGTCCAAC CTGACCTCCTCCGCCTCCACCGTGCCGCCGCCGCCGCCGCCATCCTCCGGCAACAACGGC AACAACAGCAACAAGAGGAAGCGCAGCCTCCCGGGCAACCCAGACCCGGAAGCGGAGGTG GTGGCGCTGTCGCCGGCGACGCTGATGGCGACGAACAGGTTCGTGTGCGAGATCTGCGGG AAGGGGTTCCAGAGGGACCAGAACCTGCAGCTGCACCGGCGGGGGCACAACCTGCCGTGG AAGCTGAAGCAGCGGGGGAGCAAGGAGGCGGTGAGGAAGAAGGTGTACATCTGCCCGGAG GCCAGCTGCGTCCACCACGACCCCTCCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAG CACTTCTTCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGAAGTAC GCCGTCCACTCCGACTGGAAGGCCCACTCCAAGATCTGCGGCACCCGCGAGTACAAGTGC GATTGCGGCACCATCTTCTCCAGGCGTGACAGCTTCATCACGCACCGGGCGTTCTGCGAC GCGCTCACCGAGGAGAGCGCCAAGGCCATCGGCGGCATCCCCGCCGCCATGGCCGCGCCG GGGCACCACCACCACCACCACCACCACCACCACCAGCTGCTCTTCTCGCCGCCGCCGGTC ATGGCGCACCACCAGGAGCTCGCCGCGCTGCAGGAGCAGCAGCAGCAGCAGCATCACCAG GATGTCATGCAGTCGCCGCACCAGCATCAGCAGCAGCAGCAGCAGCGGCAGCAGCTGGTG CAGCAGAACTGCGGGTACGCCGTGAAGCCGGAGATGGCGCCGTGGCCGACGACGATGCCC TACGACCACCACCACCCGCTGCTGCAGCCGCTCTGCAACGCCAACGCCGCCGCCACGGCG CAGAGCTCGGCCACGTCCGCGCCACCGACGACGCCGCAGCTGCCCGCCGCCGCCGCCGCC GCGCACCTGTCCGCCACGGCGCTGCTGCAGAAGGCGGCGCAGATGGGCGCGACCATCGGC GGCGCGGGCACCGGCGCCGCGGGCGCGCACTACGCCCACATGGCGTCCCCGGCGGGCGCG GGCGCGCCGGCCGGCGGCAGCGCCACCTTCGGCCTCGGCCTGTCGTGCCTCAACACCCAC CAGGACGGCGGCGGCGGCGGAGGCAACGGCCTCATCCCGGCCGGGATGATGGGCCACCTC GCAAGAACCGCCTCCCACGGCCGGAGCGGCGAGGACGTCGCCGGCGCCGGCGGCGGTGGC GGCGACGGCATGACGAGGGACTTCCTCGGCCTCCGCGCCTTCTCCCACCGCGACATCCTC CTCGCCGGCTTCGACTCGTCGTGCATGGGCCACGTGAACGCCGCCGCCGGCATGGCCGGC TACGAGCCACCACCACCGCACCATGGACAGCCACAGCACCAGCACCAGCAGCAGCAGCAG CAACAGCAAGGCGGCAGCAACGAGCCATGGCATGGCATGGGCAGCCATAGCTAA

Peptide Sequence

PEP ID	Os01t0572300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:21992992:21996997:1 gene:Os01g0572300 transcript:Os01t0572300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 11 description:Zinc finger, C2H2-type domain containing protein. (Os01t0572300-01)
Sequence	MFHHHLQQQQQQEEEEGGGLFLVEEAAEAADQQQESSMSNLTSSASTVPPPPPPSSGNNG NNSNKRKRSLPGNPDPEAEVVALSPATLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPW KLKQRGSKEAVRKKVYICPEASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKY AVHSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGGIPAAMAAP GHHHHHHHHHHQLLFSPPPVMAHHQELAALQEQQQQQHHQDVMQSPHQHQQQQQQRQQLV QQNCGYAVKPEMAPWPTTMPYDHHHPLLQPLCNANAAATAQSSATSAPPTTPQLPAAAAA AHLSATALLQKAAQMGATIGGAGTGAAGAHYAHMASPAGAGAPAGGSATFGLGLSCLNTH QDGGGGGGNGLIPAGMMGHLARTASHGRSGEDVAGAGGGGGDGMTRDFLGLRAFSHRDIL LAGFDSSCMGHVNAAAGMAGYEPPPPHHGQPQHQHQQQQQQQQGGSNEPWHGMGSHS

Transcript Sequence

Transcript ID	Os01t0572300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:21992992:21996997:1 gene:Os01g0572300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 11 description:Zinc finger, C2H2-type domain containing protein. (Os01t0572300-01)
Sequence	GGTTTTTGGTGCCCTTCTCTTCTTCCATTTGCTCAGCTTTGCTTCTCCACTCTCCCCTCT GGCTACTTCAGCTGCTGCCTGCCAAGCAACACACTGCTACTGCTCCTCTCCCCCAATCCT TTGATCTCTCTCTCTCCCTCTCTCTCATGGCTGCTGCTTGCCTGGCTAGCTAGCTTCCAG CTGCTTGCTTCTCTCTCTCTCTTCTCTTGAGCATCCTTGTTGTGTTCTACACTTGGTGAT GCTGCTGCTTCTGCTCTGAGTGTGTGTAGACTGTAGAGAGAGAGAGGAGAAGGAGGAGGA GGAAGGGAAAGAAAGAAGAATCTGAAAATTGCTTTAGAGTCATTGACCACCCTAGTTTCC TCCTTGTTTGTCCCCCCCTCCCCTCCTCCTTCTTGTTTGTTCCTTCCTTGAGATTCTCTG AACTCCCTTCATCCTACATGCCCTCCTGTCTCCTGCCTCCATTCTTCAGTTTTAATGCAT CCTCTTCATCACTTCACTTGAGCCTCCCAAAATTCATTGCTTCCATGGTGAGGCAGATGC TGCATGCTATGTAGCAAGAAAAGATCGAAGCTCCTATGTTTCATCACCATCTTCAGCAGC AGCAGCAGCAGGAGGAGGAGGAGGGAGGAGGATTGTTCTTGGTGGAAGAGGCCGCCGAGG CAGCAGATCAGCAGCAGGAGAGCAGCATGTCCAACCTGACCTCCTCCGCCTCCACCGTGC CGCCGCCGCCGCCGCCATCCTCCGGCAACAACGGCAACAACAGCAACAAGAGGAAGCGCA GCCTCCCGGGCAACCCAGACCCGGAAGCGGAGGTGGTGGCGCTGTCGCCGGCGACGCTGA TGGCGACGAACAGGTTCGTGTGCGAGATCTGCGGGAAGGGGTTCCAGAGGGACCAGAACC TGCAGCTGCACCGGCGGGGGCACAACCTGCCGTGGAAGCTGAAGCAGCGGGGGAGCAAGG AGGCGGTGAGGAAGAAGGTGTACATCTGCCCGGAGGCCAGCTGCGTCCACCACGACCCCT CCCGCGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTTCTTCCGCAAGCACGGCGAGA AGAAGTGGAAGTGCGACAAGTGCTCCAAGAAGTACGCCGTCCACTCCGACTGGAAGGCCC ACTCCAAGATCTGCGGCACCCGCGAGTACAAGTGCGATTGCGGCACCATCTTCTCCAGGC GTGACAGCTTCATCACGCACCGGGCGTTCTGCGACGCGCTCACCGAGGAGAGCGCCAAGG CCATCGGCGGCATCCCCGCCGCCATGGCCGCGCCGGGGCACCACCACCACCACCACCACC ACCACCACCAGCTGCTCTTCTCGCCGCCGCCGGTCATGGCGCACCACCAGGAGCTCGCCG CGCTGCAGGAGCAGCAGCAGCAGCAGCATCACCAGGATGTCATGCAGTCGCCGCACCAGC ATCAGCAGCAGCAGCAGCAGCGGCAGCAGCTGGTGCAGCAGAACTGCGGGTACGCCGTGA AGCCGGAGATGGCGCCGTGGCCGACGACGATGCCCTACGACCACCACCACCCGCTGCTGC AGCCGCTCTGCAACGCCAACGCCGCCGCCACGGCGCAGAGCTCGGCCACGTCCGCGCCAC CGACGACGCCGCAGCTGCCCGCCGCCGCCGCCGCCGCGCACCTGTCCGCCACGGCGCTGC TGCAGAAGGCGGCGCAGATGGGCGCGACCATCGGCGGCGCGGGCACCGGCGCCGCGGGCG CGCACTACGCCCACATGGCGTCCCCGGCGGGCGCGGGCGCGCCGGCCGGCGGCAGCGCCA CCTTCGGCCTCGGCCTGTCGTGCCTCAACACCCACCAGGACGGCGGCGGCGGCGGAGGCA ACGGCCTCATCCCGGCCGGGATGATGGGCCACCTCGCAAGAACCGCCTCCCACGGCCGGA GCGGCGAGGACGTCGCCGGCGCCGGCGGCGGTGGCGGCGACGGCATGACGAGGGACTTCC TCGGCCTCCGCGCCTTCTCCCACCGCGACATCCTCCTCGCCGGCTTCGACTCGTCGTGCA TGGGCCACGTGAACGCCGCCGCCGGCATGGCCGGCTACGAGCCACCACCACCGCACCATG GACAGCCACAGCACCAGCACCAGCAGCAGCAGCAGCAACAGCAAGGCGGCAGCAACGAGC CATGGCATGGCATGGGCAGCCATAGCTAAGCTAAGCTACTTTAGCCATAGCCATTTCTTC TTCCTTCCTCTCATCAGCTAGCCATGCATCACACTTGCCACCACCACCATTGCCTTGCTC TTAGCTAGGGTCAGGCCATCACTGCTTTTGCTATACTACTCTAGTGCAAAGATGCCTTTT TTGAAATGGGTAAATCTCTCTCATATTTCTCCTCTCCTTTTTAAACATCTTGTGTTTATG ATATAATCTCATGATCTTGGAAGCTAAGCAAGCAAGTAAAAGCAGCCATGGCGAAGGCAT GGATGGATGGATATGATACGGTACTGCAGGCAATCAGTCAGGGAGTTTGTAATTTTTTGT TCGTTTGGTAGGAGGAGAGAACTGTATAAGCTAAGCACGGATCAGGTGAAGGAAAAACTA AAGCTATGTGACAATCAATAATAATACATGCACCC