Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0566800-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:21687799:21689199:-1 gene:Os01g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 117 description:Hypothetical conserved gene. (Os01t0566800-00)
Sequence	ATGGATCGTGGCTTCAACGAGATGATCTTGAGCGAGAGCGTGTGGAATGGCGGCGGCGGC GGCGGAGATGGAGATGGTGGGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCG GTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCG GCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGGGGCGGCGGCAAGGTG GCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCGAGGCGGCGGTCGCCTTCGCG GCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAG CGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCA CCAGCAACACCGGCTGTCACGTTGAGCGCTGTACCACCACCACCACCACCACCTGCGTTC GCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGC ATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACTGCCACT GCAACGACCAGCCAGTGCGAACGAGTCAGAGGAGGCGGCGGCGGCGGCGGATGTGGACGT AAGCAACGCCGGCCGGGAAGAAAGCGGAAGGCCGCCGAGCCAACCGCCGCCGCCGCCGCG GCGGACATGTCGTCGCAGGACAACCCTCTCTGCAGCCTCCTGGCGTCGAACACCGCCGGC GCCGACGGCGGCATCCAGATCGCGTTCAGCACGAGCGCCCCGGCGTCGAAGCGGGCGAAG CCGTCGCTGAGCAGCAGCTCGTCGAGCATCAGCTTCGACGGCAGGGGCCCCGGCGGCAAC TGCGGCGGCGGCGGCGGCGACGACCCACTGTACGAGCCCGACACGGAGGCGCTGGCGCAG GTGAAGGAGATGATCTACCGCGCGGCGGCGATGCGCCCCGTGACCCTCGGCGCCGAGGAC GCCGGCGAGCGCCCCCGCCGCCGCAACGTGCGCATCTCCTCCGACCCGCAGACGGTGGCG GCGCGGCAGCGGCGGGAGCGCATCAGCGAGCGCCTGCGCGTCCTGCAGAAGCTCGTCCCC GGCGGCGCCAAGATGGACACGGCCTCCATGCTCGACGAGGCCGCCAACTACCTCCGCTTC CTCAAGTCCCAGATCAGGGAGCTGCAAACCCTAGACCGCCGGAACTACCCGAACGCCGCC ATGTCCATCAACACCGCCGCCGCCACCACCATGGCGACATCCAGTTCACCAACCTACAAC AACAGCAACGCCGCCATGCCAGCCTTCGCCTTCCCGGAAACCCTAGGATGCGGAGGAGGA GGAGTCGAGCAGCTGATCTAA

Peptide Sequence

PEP ID	Os01t0566800-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:21687799:21689199:-1 gene:Os01g0566800 transcript:Os01t0566800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 117 description:Hypothetical conserved gene. (Os01t0566800-00)
Sequence	MDRGFNEMILSESVWNGGGGGGDGDGGAVVLPPEVGGVNAVDGSGMTMLERLVLDEALAA AILELQGIQAPGCGGGGGKVAVVPPPTAGDGGVEAAVAFAAMATGTPAYADVDADVLQRQ RQHHHRHQGAMGMAAEYDVAPATPAVTLSAVPPPPPPPAFATAAASVDGGGAMDATVFSG IGNDDVVDAVSATVAMTTATATTSQCERVRGGGGGGGCGRKQRRPGRKRKAAEPTAAAAA ADMSSQDNPLCSLLASNTAGADGGIQIAFSTSAPASKRAKPSLSSSSSSISFDGRGPGGN CGGGGGDDPLYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGERPRRRNVRISSDPQTVA ARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNAA MSINTAAATTMATSSSPTYNNSNAAMPAFAFPETLGCGGGGVEQLI

Transcript Sequence

Transcript ID	Os01t0566800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:21687799:21689199:-1 gene:Os01g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 117 description:Hypothetical conserved gene. (Os01t0566800-00)
Sequence	ATGGATCGTGGCTTCAACGAGATGATCTTGAGCGAGAGCGTGTGGAATGGCGGCGGCGGC GGCGGAGATGGAGATGGTGGGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCG GTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCG GCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGGGGCGGCGGCAAGGTG GCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCGAGGCGGCGGTCGCCTTCGCG GCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAG CGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCA CCAGCAACACCGGCTGTCACGTTGAGCGCTGTACCACCACCACCACCACCACCTGCGTTC GCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGC ATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACTGCCACT GCAACGACCAGCCAGTGCGAACGAGTCAGAGGAGGCGGCGGCGGCGGCGGATGTGGACGT AAGCAACGCCGGCCGGGAAGAAAGCGGAAGGCCGCCGAGCCAACCGCCGCCGCCGCCGCG GCGGACATGTCGTCGCAGGACAACCCTCTCTGCAGCCTCCTGGCGTCGAACACCGCCGGC GCCGACGGCGGCATCCAGATCGCGTTCAGCACGAGCGCCCCGGCGTCGAAGCGGGCGAAG CCGTCGCTGAGCAGCAGCTCGTCGAGCATCAGCTTCGACGGCAGGGGCCCCGGCGGCAAC TGCGGCGGCGGCGGCGGCGACGACCCACTGTACGAGCCCGACACGGAGGCGCTGGCGCAG GTGAAGGAGATGATCTACCGCGCGGCGGCGATGCGCCCCGTGACCCTCGGCGCCGAGGAC GCCGGCGAGCGCCCCCGCCGCCGCAACGTGCGCATCTCCTCCGACCCGCAGACGGTGGCG GCGCGGCAGCGGCGGGAGCGCATCAGCGAGCGCCTGCGCGTCCTGCAGAAGCTCGTCCCC GGCGGCGCCAAGATGGACACGGCCTCCATGCTCGACGAGGCCGCCAACTACCTCCGCTTC CTCAAGTCCCAGATCAGGGAGCTGCAAACCCTAGACCGCCGGAACTACCCGAACGCCGCC ATGTCCATCAACACCGCCGCCGCCACCACCATGGCGACATCCAGTTCACCAACCTACAAC AACAGCAACGCCGCCATGCCAGCCTTCGCCTTCCCGGAAACCCTAGGATGCGGAGGAGGA GGAGTCGAGCAGCTGATCTAA