Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0566100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:21639932:21643059:-1 gene:Os01g0566100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY FLOWERING 3.2 description:Conserved hypothetical protein. (Os01t0566100-01)
Sequence

ATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCCCG
CTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCC
AGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAGCGGCGGA
GGCGGCGCGCTCGCCTCGGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGCGAGCCAG
AGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTCCAATGGA
CCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGACAGATTAATGGTTCA
AGAAAAGATTCGGGGATGTTATCCACTCAGCCTAAGGGCATTGATAAATATGGTTCAGGA
TCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTCTTCGGGA
AGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAGATTTCCT
CAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGTTGCTCTC
AGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAACACTGTT
AGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCAGAAAGAC
AAGGAGACAGGACCAGCACAAACATTGAAAAATGTGGAAGTTGAACATTTTTCATCATTT
GAGGCATCCAAAGATATGTTTGGAAGCAAACATGCTAAAGTATGTCCTAAGACAGGCACT
ATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGAGCATCAAGCGACAAGTAGAAAC
GGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCA
TCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAA
GCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTG
TCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGT
GCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAAGTAA

Peptide Sequence

PEP ID

Os01t0566100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:21639932:21643059:-1 gene:Os01g0566100 transcript:Os01t0566100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY FLOWERING 3.2 description:Conserved hypothetical protein. (Os01t0566100-01)
Sequence

MRGGGGGGKEVEERGKVMGPLFPRLHVNDAAKGGGPRAPPRNKMALYEQFTVPSHRFSGG
GGALASARGSLARSTSAASQSQVYGCDMPLFEPFNVPSNGPGQSVEKMNSNSVNRQINGS
RKDSGMLSTQPKGIDKYGSGSRAECAPQQRVEKGIKSSSGRKLADDDEFIVPSVFSARFP
QYSTKERAGVQEESTPLVALSPHKSPPAVSKSPTKCYNTVSKNLERINVSDVKSRGSQKD
KETGPAQTLKNVEVEHFSSFEASKDMFGSKHAKVCPKTGTINDLDEPHLENSEHQATSRN
GSSVKFQNPPVRRNTISAKPSPGIENTNGHCNLPQGGLKEAGTKRKRLEAQDNAEKIDDL
SDSSVECITAWEISPDEIVGAIGAKHFWKARRAIIK

Transcript Sequence

Transcript ID

Os01t0566100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:21639932:21643059:-1 gene:Os01g0566100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY FLOWERING 3.2 description:Conserved hypothetical protein. (Os01t0566100-01)
Sequence

CTTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCG
CCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGA
GGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGA
GGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGAT
GGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGC
GCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAG
CGGCGGAGGCGGCGCGCTCGCCTCGGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGC
GAGCCAGAGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTC
CAATGGACCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGACAGATTAA
TGGTTCAAGAAAAGATTCGGGGATGTTATCCACTCAGCCTAAGGGCATTGATAAATATGG
TTCAGGATCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTC
TTCGGGAAGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAG
ATTTCCTCAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGT
TGCTCTCAGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAA
CACTGTTAGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCA
GAAAGACAAGGAGACAGGACCAGCACAAACATTGAAAAATGTGGAAGTTGAACATTTTTC
ATCATTTGAGGCATCCAAAGATATGTTTGGAAGCAAACATGCTAAAGTATGTCCTAAGAC
AGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGAGCATCAAGCGACAAG
TAGAAACGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGC
TAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTT
AAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGA
TGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAAT
TGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAAGTAAGT
GTACTACACTAGAATAATTTGATTGTATTAAGTATATCATTGATGAAAGCAAAATATAAT
GATATACTGATTCTTCTATAGTAAGTATAGGGCTGCAAGAATAGCTGTAGGCTACTAGGC
TCATGAGCTGCTCAATCAACTTGCTTTTTACCTCAACTCAAGATCAACTAAAATACAAAT
GAGATGAGTTTGGGTGTATTTTGTAGTTTGACTGTAAAAGATGAGTGTGAGTCGAGGTCA
TATCTTTCTAGCCTTGTTTCTGCAAACATGTAGATTTCAGATAACTAACTTAAACTATCG
C