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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0565800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:21628898:21630661:-1 gene:Os01g0565800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0565800-00)
Sequence

ATGGATCAGATCATGGGGAAAGTGGGCGGGTACTGGTTCAAGCAGAATGCCGGCAAGGAG
ATCAACAACATCGGCGACGATATCAATTCAATCTCTAGCAGCATTGGAGATGGTGCCAAA
TGGATGGTCAACAAGATCAAAGGGAAGATGCAGAAGCCATTGCCGGAGTTCCTCAAGGAG
TACGACCTCCCAGTGGGTCTCTTCCCGCAGGACGCGACCAACTACGAGTTCAACGAGGAG
ACGAAGAAGCTGACGGTGTACATCTCGTCGGCCTGCGAGGTCGGCTACAAGGACTCCTCC
GTGCTCCGCTTCTCCACCACCGTGACGGGCTACCTGGAGAAGGGGAAGCTGTCGGAGGTC
GAGGGCCTCAAGACCAAGATCCTCATCTGGACCAAGGTGATGGCCGTCAGGACCGAGGCC
ACCAAGGTGCACTTCGCCGCCGGCATGAACAAGGCCAGGAATCGCGACGCCTACGAGGTC
GTCAGGGATGGCGTCGGCATAGACAAGTTCTAG

Peptide Sequence

PEP ID

Os01t0565800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:21628898:21630661:-1 gene:Os01g0565800 transcript:Os01t0565800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0565800-00)
Sequence

MDQIMGKVGGYWFKQNAGKEINNIGDDINSISSSIGDGAKWMVNKIKGKMQKPLPEFLKE
YDLPVGLFPQDATNYEFNEETKKLTVYISSACEVGYKDSSVLRFSTTVTGYLEKGKLSEV
EGLKTKILIWTKVMAVRTEATKVHFAAGMNKARNRDAYEVVRDGVGIDKF

Transcript Sequence

Transcript ID

Os01t0565800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:21628898:21630661:-1 gene:Os01g0565800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0565800-00)
Sequence

GAAGTTGAGATCGGTGGAGAACTGGAGATCGAGGGGAGATGGATCAGATCATGGGGAAAG
TGGGCGGGTACTGGTTCAAGCAGAATGCCGGCAAGGAGATCAACAACATCGGCGACGATA
TCAATTCAATCTCTAGCAGCATTGGAGATGGTGCCAAATGGATGGTCAACAAGATCAAAG
GGAAGATGCAGAAGCCATTGCCGGAGTTCCTCAAGGAGTACGACCTCCCAGTGGGTCTCT
TCCCGCAGGACGCGACCAACTACGAGTTCAACGAGGAGACGAAGAAGCTGACGGTGTACA
TCTCGTCGGCCTGCGAGGTCGGCTACAAGGACTCCTCCGTGCTCCGCTTCTCCACCACCG
TGACGGGCTACCTGGAGAAGGGGAAGCTGTCGGAGGTCGAGGGCCTCAAGACCAAGATCC
TCATCTGGACCAAGGTGATGGCCGTCAGGACCGAGGCCACCAAGGTGCACTTCGCCGCCG
GCATGAACAAGGCCAGGAATCGCGACGCCTACGAGGTCGTCAGGGATGGCGTCGGCATAG
ACAAGTTCTAGA