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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0565600-03
CDS Infomation

cds chromosome:IRGSP-1.0:1:21623761:21626514:-1 gene:Os01g0565600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF866, eukaryotic family protein. (Os01t0565600-01);Similar to predicted protein. (Os01t0565600-03)
Sequence

GCGACGACCCGACCTACCCCTACTACTTCAAGGTCCGGGTGCTCGATCGCTCCTCTCTCT
CTCCTCCTCCTCCTCCCTTTGATCTCTCTCGATTTGGTTGGGGGTGGTGCTGATTGGTGG
TGTTGGCGCCTCTGTTGTTGTGGTGGATCGCAGCTGCGGTGCGAGAACTGCGGGGAGGTC
AGCGCCAAGGCAACCTGCGTCTCCCTCGGCGAGGTCGTCGACCTGCCCAACGGACGCAGC
ACCGCTAACCTTGTCCAGAAGTGCAAGCTTTGTGGGAGGGATGCATCGATTGTGATGATT
CCTGGGCAGGGGACACCACTGACTATGGAGCAGAGCCAAAAAGGAGATAGAACTTGTTTG
ATGGTCTTTGACTGCAGAGGCTGTGAACCTATTGATTTCGCTTTTGGTAATGGCTGGAAG
GCTGAATCTCTGGAAGGGACTTCATTTGACATTGACTGCTCTGAAGGTGAGTTTGCTGAT
TACGATGAGAAGGGGGAGTGCCCTGTAGGTGTGGGCAAGCTGCGGTCAGAATTCAGAGTG
GTGAAGAAGCAGGAGAGTCGTGGGAAGACTAAATATGTCTAG

Peptide Sequence

PEP ID

Os01t0565600-03
PEP Infomation

pep chromosome:IRGSP-1.0:1:21623761:21626514:-1 gene:Os01g0565600 transcript:Os01t0565600-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF866, eukaryotic family protein. (Os01t0565600-01);Similar to predicted protein. (Os01t0565600-03)
Sequence

ATTRPTPTTSRSGCSIAPLSLLLLLPLISLDLVGGGADWWCWRLCCCGGSQLRCENCGEV
SAKATCVSLGEVVDLPNGRSTANLVQKCKLCGRDASIVMIPGQGTPLTMEQSQKGDRTCL
MVFDCRGCEPIDFAFGNGWKAESLEGTSFDIDCSEGEFADYDEKGECPVGVGKLRSEFRV
VKKQESRGKTKYV

Transcript Sequence

Transcript ID

Os01t0565600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:21623761:21626514:-1 gene:Os01g0565600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF866, eukaryotic family protein. (Os01t0565600-01);Similar to predicted protein. (Os01t0565600-03)
Sequence

GCGACGACCCGACCTACCCCTACTACTTCAAGGTCCGGGTGCTCGATCGCTCCTCTCTCT
CTCCTCCTCCTCCTCCCTTTGATCTCTCTCGATTTGGTTGGGGGTGGTGCTGATTGGTGG
TGTTGGCGCCTCTGTTGTTGTGGTGGATCGCAGCTGCGGTGCGAGAACTGCGGGGAGGTC
AGCGCCAAGGCAACCTGCGTCTCCCTCGGCGAGGTCGTCGACCTGCCCAACGGACGCAGC
ACCGCTAACCTTGTCCAGAAGTGCAAGCTTTGTGGGAGGGATGCATCGATTGTGATGATT
CCTGGGCAGGGGACACCACTGACTATGGAGCAGAGCCAAAAAGGAGATAGAACTTGTTTG
ATGGTCTTTGACTGCAGAGGCTGTGAACCTATTGATTTCGCTTTTGGTAATGGCTGGAAG
GCTGAATCTCTGGAAGGGACTTCATTTGACATTGACTGCTCTGAAGGTGAGTTTGCTGAT
TACGATGAGAAGGGGGAGTGCCCTGTAGGTGTGGGCAAGCTGCGGTCAGAATTCAGAGTG
GTGAAGAAGCAGGAGAGTCGTGGGAAGACTAAATATGTCTAGATCCAGCGGCATCTGGGG
TATTCAATCATACAAGCTGGGAATGTATAAAGCGTATTATAAAATGAGACCTTTCTCTCG
TATGTGTGAACAAAACTCGGGAACATCCTTTTGCTGATGCTGTGGGATGCCAATGGATTT
GGCGACATGTTAGGCACCGAACCATCCATTATTCCCTACCAGTTCCATTAACCTGGATCA
TTTCG