Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0564300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:21525509:21549819:1 gene:Os01g0564300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 46 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os01t0564300-01)
Sequence

ATGCCGATCCCGGTTGATCTGGGCGAGCCTGACAACAGGAGGTTCTTCGTGTGGGTGGAA
GACAATATATTGACGATATTACCACCTGATGCCGATGACCATGAGTACTCTGGATTTAAT
ATGTGGACCGTCCAAAAGCCTTCAGCTGGCTCAACCGCCATTAACTTATTATTTCCAGGA
GGCGCAACCGCAGCTGAACTAATGTACGCCGTTCCTGGAGCCTCCAAGTGCTCCAAACCC
GAGGATGATGATGCCGTATACTGCGTCGAGGCCCAAGTTCACTTCATTGGAGAACAACTT
GACGGTACCGAGTTCGTTTCAACCCGAGAAAATGGTGTTCCACAAAGGTTTATACTGGGA
CAAGAGAATGTGATGCATGGCTTAAGCTTGGTGGTCAGCGCAATGCGACCAGGGGAGAGA
GCTATATTCACCATCCCTCCAAAGTTAGCCATAACCAAGTCTGGCTCCCCTGCCAGTATT
CCGTCAAGCATACCTCCCGAGCAAACACTACGGTTTGAGATTGAACTCATTTCGCTGTTT
GCTATAACTGATATCCTCGAAAATGGAAGCATATTGAAAAAGATCATCAAGCGCCCATTA
CCGGACAAATCTCCCTCCAATCATGCAGATACTGTAATTGTGAATTACAACGCATGTCTA
GAAGACGGAAATTCAGTTTCCAAATCTGAACGTCTTGAATTGAACCTTGCCAGTCGTACC
GGTTTCTTTTGTCCAGCTTTGAAATATGCTGTGAAGACTATGAGGGAAGGAGAGGAAGCG
ATATTCATTGTAAAGCCAAGATATGCTTTCGGTGCTCAAGGCAGGGATTCTACTGGAGAC
CAAGCTGCTGTGCCCCCTGATGCAACTCTTTATCTGTACGTCCAGTTAGCTGAACGGAAG
ACAGCTAAACAAAATGAAGCAGAGGAAAAAGGACCATTCATAGATGGCCCGAATGAAGCC
AAGACGACAGCCAGAGCTCTTCCCAAGCGTCGTCCTGTCAAGCCGGGATTCTCCTTGCCT
GTAGTACAGAATGATAGACCTACGTATCCTGGACACGTTCTCTTCGTCCCACATGTGGTA
GAAGAAGAGGAGGCAGATGCAGGCCAAGCTGCTTCAACTACTACTAGTGGTCTTGCTACA
CCGCCAACGACTGCCGCCGATGTTGGCACGAGTGCAGCCACAAACAGCAGCGCTGCTCAA
GGCTCGGGGATAGTCAAGACGGAGACAGGTTTCCTCTTCAAACGTTTCAGGCCATGGCCT
GCAAACTGA

Peptide Sequence

PEP ID

Os01t0564300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:21525509:21549819:1 gene:Os01g0564300 transcript:Os01t0564300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 46 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os01t0564300-01)
Sequence

MPIPVDLGEPDNRRFFVWVEDNILTILPPDADDHEYSGFNMWTVQKPSAGSTAINLLFPG
GATAAELMYAVPGASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRENGVPQRFILG
QENVMHGLSLVVSAMRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLF
AITDILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRT
GFFCPALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERK
TAKQNEAEEKGPFIDGPNEAKTTARALPKRRPVKPGFSLPVVQNDRPTYPGHVLFVPHVV
EEEEADAGQAASTTTSGLATPPTTAADVGTSAATNSSAAQGSGIVKTETGFLFKRFRPWP
AN

Transcript Sequence

Transcript ID

Os01t0564300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:21525509:21549819:1 gene:Os01g0564300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 46 description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os01t0564300-01)
Sequence

AACCGGCGGCCTTGAAGTCTTTATCTCGATCAGTTGCCCACTTTTGCAGATTGCAGGGCG
CGCAGTACTGCCGACAGCAACTCAAGGAGAAACGCAGGTGCCTGCCTAGCCTCAGCAGGC
AGGCATGCCGATCCCGGTTGATCTGGGCGAGCCTGACAACAGGAGGTTCTTCGTGTGGGT
GGAAGACAATATATTGACGATATTACCACCTGATGCCGATGACCATGAGTACTCTGGATT
TAATATGTGGACCGTCCAAAAGCCTTCAGCTGGCTCAACCGCCATTAACTTATTATTTCC
AGGAGGCGCAACCGCAGCTGAACTAATGTACGCCGTTCCTGGAGCCTCCAAGTGCTCCAA
ACCCGAGGATGATGATGCCGTATACTGCGTCGAGGCCCAAGTTCACTTCATTGGAGAACA
ACTTGACGGTACCGAGTTCGTTTCAACCCGAGAAAATGGTGTTCCACAAAGGTTTATACT
GGGACAAGAGAATGTGATGCATGGCTTAAGCTTGGTGGTCAGCGCAATGCGACCAGGGGA
GAGAGCTATATTCACCATCCCTCCAAAGTTAGCCATAACCAAGTCTGGCTCCCCTGCCAG
TATTCCGTCAAGCATACCTCCCGAGCAAACACTACGGTTTGAGATTGAACTCATTTCGCT
GTTTGCTATAACTGATATCCTCGAAAATGGAAGCATATTGAAAAAGATCATCAAGCGCCC
ATTACCGGACAAATCTCCCTCCAATCATGCAGATACTGTAATTGTGAATTACAACGCATG
TCTAGAAGACGGAAATTCAGTTTCCAAATCTGAACGTCTTGAATTGAACCTTGCCAGTCG
TACCGGTTTCTTTTGTCCAGCTTTGAAATATGCTGTGAAGACTATGAGGGAAGGAGAGGA
AGCGATATTCATTGTAAAGCCAAGATATGCTTTCGGTGCTCAAGGCAGGGATTCTACTGG
AGACCAAGCTGCTGTGCCCCCTGATGCAACTCTTTATCTGTACGTCCAGTTAGCTGAACG
GAAGACAGCTAAACAAAATGAAGCAGAGGAAAAAGGACCATTCATAGATGGCCCGAATGA
AGCCAAGACGACAGCCAGAGCTCTTCCCAAGCGTCGTCCTGTCAAGCCGGGATTCTCCTT
GCCTGTAGTACAGAATGATAGACCTACGTATCCTGGACACGTTCTCTTCGTCCCACATGT
GGTAGAAGAAGAGGAGGCAGATGCAGGCCAAGCTGCTTCAACTACTACTAGTGGTCTTGC
TACACCGCCAACGACTGCCGCCGATGTTGGCACGAGTGCAGCCACAAACAGCAGCGCTGC
TCAAGGCTCGGGGATAGTCAAGACGGAGACAGGTTTCCTCTTCAAACGTTTCAGGCCATG
GCCTGCAAACTGAAGCGATCATTCGTGATCAATTGTGCCACTGTGTCATCACCGGATCAT
TCGTGATCAATTGTGTATTTCGGTTATACTAATAAGCTTGGACTCCTAAGGTGATTGTAC
TCGTGTCAGGTCGCGTTATTTTGAGTGTATCCCTTTATTGGGTTAACGTACTTTTACTTC
TCTGTATATCAATAAAATAAGACAGTTTTT