Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0560200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:21275618:21278757:1 gene:Os01g0560200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13). (Os01t0560200-01)
Sequence	ATGGCCGACGTGTTCGAGGGCTACGAGCGCCAGTACTGCGAGATCTCCGCCTCCCTCGCC CGCAAGTGCACCGCTGCCTCCGCTCTCCAAGGAGAGAAGCTGAAGCAGAAGGCGTCGGAG ATCAAGTCTGGCATCGATGGGGCCGAGGCACTGATAAAGAAGATGGATCTTGAAGCAAGG AACCAACAGCCAAGTGTGAGGGCTGGGCTGCTGGCAAAACTGAGGGAGTACAAGTCAGAT CTTAACAACCTGAAAGGAACGTTGAAGAGGGTCACCACCGGTAACGCGCAGCAAGGGTCG AGGGAAGAGTTGCTGGAGTCAGGAATGGCTGAAACGTTGGGGGTATCTGCTGATCAAAAG TCAAGATTGCTCAGGATAACTGAAAAGCAAAATAAAACAACCGATAGGATCAGAGATAGC CACAGAACTATGCTGGAGACTGAAGATCTTGGAGTCTCCCTCTTGCAGGACCTGCATCAA CAGCGTGAACGTCTAATACATGCTCATGGCACATTGGATAACGTGGATGACAACATCGGG AAGAGTAGAAGGATCATGGGTGCCATGGTGAGGAGGATGGACAGGAACAAGTGGATCATA GGTTTCATTATAGCTCTCCTTGTGTTGGTGATCCTAGTAATCCTGTATTTCAAGTTTGTG CACTGA

Peptide Sequence

PEP ID	Os01t0560200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:21275618:21278757:1 gene:Os01g0560200 transcript:Os01t0560200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13). (Os01t0560200-01)
Sequence	MADVFEGYERQYCEISASLARKCTAASALQGEKLKQKASEIKSGIDGAEALIKKMDLEAR NQQPSVRAGLLAKLREYKSDLNNLKGTLKRVTTGNAQQGSREELLESGMAETLGVSADQK SRLLRITEKQNKTTDRIRDSHRTMLETEDLGVSLLQDLHQQRERLIHAHGTLDNVDDNIG KSRRIMGAMVRRMDRNKWIIGFIIALLVLVILVILYFKFVH

Transcript Sequence

Transcript ID	Os01t0560200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:21275618:21278757:1 gene:Os01g0560200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13). (Os01t0560200-01)
Sequence	AATTCCTCCTCGCCTCGGTTGTTTCGTCCCAGGAAACTCGATTCTGCTTCTGAATCGGAT TTTCCCAGGGATTTCGCCGGCGGCTAGGATCGGGTCGGGGGTCCGCCATGGCCGACGTGT TCGAGGGCTACGAGCGCCAGTACTGCGAGATCTCCGCCTCCCTCGCCCGCAAGTGCACCG CTGCCTCCGCTCTCCAAGGAGAGAAGCTGAAGCAGAAGGCGTCGGAGATCAAGTCTGGCA TCGATGGGGCCGAGGCACTGATAAAGAAGATGGATCTTGAAGCAAGGAACCAACAGCCAA GTGTGAGGGCTGGGCTGCTGGCAAAACTGAGGGAGTACAAGTCAGATCTTAACAACCTGA AAGGAACGTTGAAGAGGGTCACCACCGGTAACGCGCAGCAAGGGTCGAGGGAAGAGTTGC TGGAGTCAGGAATGGCTGAAACGTTGGGGGTATCTGCTGATCAAAAGTCAAGATTGCTCA GGATAACTGAAAAGCAAAATAAAACAACCGATAGGATCAGAGATAGCCACAGAACTATGC TGGAGACTGAAGATCTTGGAGTCTCCCTCTTGCAGGACCTGCATCAACAGCGTGAACGTC TAATACATGCTCATGGCACATTGGATAACGTGGATGACAACATCGGGAAGAGTAGAAGGA TCATGGGTGCCATGGTGAGGAGGATGGACAGGAACAAGTGGATCATAGGTTTCATTATAG CTCTCCTTGTGTTGGTGATCCTAGTAATCCTGTATTTCAAGTTTGTGCACTGAGGGACTC CTTGACCATCCAAGGACTGATGAACTGTGTGCGTTCTTTGCATATTCGTTTTGTCTTATT TCTTTTTTTGGGTTTGGACGAAACCATTTCATGTGGTGGTTGTGAATGTGTTTTGGTCAT GTAAAAAAAGTGAGAAGGTTTTGAGTATCTGATAGTTTCATGGATC