Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0559300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:21184950:21187424:1 gene:Os01g0559300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0559300-01)
Sequence

ATGACGACGACGACGACGGCGGCGACGAGGAGGTGGTGGAAGCGCCGCGGCGGCGGCGGC
GGCGACGGCGCGGAAGACGGCGACGACCTCATCCCGATGGACATCCAAGACCAGGAGGAG
ATGGTCCGGTCGCTGGAGCAGAAGCAGGCGCAGCAGAGCCGCCGGTGGAGGCGCGTCTTC
GCCGGGTTCCTCCTCGGCTACGCGGCCTTCCTCGTCTACTCCGGCTTTCACCATGCGGCG
GCCCCGTGGGAACTGCGGTATCATGCTTATTTCATGGAAGATTTGTCATCACCGATGGTC
GTAGTTGCAGATTGGATAGCTGCCCTAGCATGTTTATTCTCAATTAAAGGATTACTTCAC
TCCTGGAAGAAGTGGATGTGGTATTCATTCTATGTCAGCATACTAGTAGCCCTCTTCTGG
ACATACTACCTCTTGAGGTTACCGAGAATTCGATGGGATGTAGCATGGCTCCCGTTTGGC
CCTTTGATTGCTTCTGCATTGAGCCTCTATGTGGACCACTCTATGCTGGAGTCAATGCAA
GATATCAACACCTTGAGGAGCTACATGTATAACTACAAGGCCTTGTAG

Peptide Sequence

PEP ID

Os01t0559300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:21184950:21187424:1 gene:Os01g0559300 transcript:Os01t0559300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0559300-01)
Sequence

MTTTTTAATRRWWKRRGGGGGDGAEDGDDLIPMDIQDQEEMVRSLEQKQAQQSRRWRRVF
AGFLLGYAAFLVYSGFHHAAAPWELRYHAYFMEDLSSPMVVVADWIAALACLFSIKGLLH
SWKKWMWYSFYVSILVALFWTYYLLRLPRIRWDVAWLPFGPLIASALSLYVDHSMLESMQ
DINTLRSYMYNYKAL

Transcript Sequence

Transcript ID

Os01t0559300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:21184950:21187424:1 gene:Os01g0559300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0559300-01)
Sequence

AAAAATCACATTCCAAATCAGAAACCTCGGACCTCCAACCCAGGATCGGAGCGGATGACG
ACGACGACGACGGCGGCGACGAGGAGGTGGTGGAAGCGCCGCGGCGGCGGCGGCGGCGAC
GGCGCGGAAGACGGCGACGACCTCATCCCGATGGACATCCAAGACCAGGAGGAGATGGTC
CGGTCGCTGGAGCAGAAGCAGGCGCAGCAGAGCCGCCGGTGGAGGCGCGTCTTCGCCGGG
TTCCTCCTCGGCTACGCGGCCTTCCTCGTCTACTCCGGCTTTCACCATGCGGCGGCCCCG
TGGGAACTGCGGTATCATGCTTATTTCATGGAAGATTTGTCATCACCGATGGTCGTAGTT
GCAGATTGGATAGCTGCCCTAGCATGTTTATTCTCAATTAAAGGATTACTTCACTCCTGG
AAGAAGTGGATGTGGTATTCATTCTATGTCAGCATACTAGTAGCCCTCTTCTGGACATAC
TACCTCTTGAGGTTACCGAGAATTCGATGGGATGTAGCATGGCTCCCGTTTGGCCCTTTG
ATTGCTTCTGCATTGAGCCTCTATGTGGACCACTCTATGCTGGAGTCAATGCAAGATATC
AACACCTTGAGGAGCTACATGTATAACTACAAGGCCTTGTAGTGTGGAGAATATGGCTAG
TTGTATCTATACATGTAATAGGTTTGCACTTTTCATTAACTCCCGGTATAGCTTAGAGTT
CATCTACTTCTAGTTTACTGCTAAACAATGGAGATTCACAGGTTTCATCTTTGAATGGAA
TTATTTTGGTTAATGTAGCATC