Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0558500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:21140674:21143070:1 gene:Os01g0558500 gene_biotype:protein_coding transcript_biotype:protein_coding description:PWWP domain containing protein. (Os01t0558500-01);Hypothetical conserved gene. (Os01t0558500-02)
Sequence	GAAGAGGAGTCAGCTAAAGGTTTGTCTCAGGCCTTAACATTATATAAACAGCCACAGAAT GTGTCCTCTTCAAGCACTAGGTATGCTTCATCATCAAGGAAGAAACATAAGGCATCAAAT GATTTTGAGGATGACACAGTTCAAGGATCCCAACGTATGAGAGACCTTACGGAGATTGGA TCAAAGAAACACAGTTCATACGTCCTAAATGGGCACCGGGATCTACCACTTCTTGAGAGT GCAAGCTTTGGTTATAGCTTGTCTGGTACCAATGGGATAAAAGGTGATCCGCAGTCTCAT TCGGCAACAAAAAGGAAGCGTTCCAATATTGGCCAAGCTTATGAAAATTCAAGGAAGAAA GACAGACGTCGCCCTTTATCGAAGTTATGTAAAGATTCAGCTGTGGCAGTTCCAGCATAT AGCCACTGGGATCCTTCAGGGCATTCTTCTGCCCAGTACTCAGGAGGCAAAATGTCCAAT GCATTTGAACCAAGTAGGGGGAAATTTGGTTTCCCATTGGATGTAAATAATTATTCATAC AGCTCAGGGACCTCAAGTGTGGAAACTTTATTAGATGCATCATGCGCAAATCATGATGGT GTTGCCAAGGTAATTCCAGTAAAGGAAGCGGAGGTCTCATGCATGCCTGGGTTTCTCAAT AATGACTGCTCTGATGGCGATGAATATTTTGATACCCCCCTTGTTATGGAGGAAGATGCC CTCGAAGAAGATCATCTGCATAAATATGAATCATGTGCATCAGTCAAGGGCCAGATCTCA AAACCCAGGAAGCAAACTGCTGAATATACTGAACTGGTCATACCTTCACCTCATGGTCAC AGAAGTTCTAAGAAGAAAAGCATGAGCTTTGTTAGTCAAAGAACACAAGAAAACCACAAG GATAGGACTTTGTTGGCACAACATGGAAGAACAGTAAAAGGGCAAGCATTAGACACTGAT GCTGTTGAGGTGGATGCCAGGGTGAGCAGTGCTTTCTGTAAGCCCCCTGCACTTAAGAAC AATATGCAACTTGCAATAGTTCCTGCTGATGGTTGTGCCAGTACTTTGGAGCAACAGTAT TATGGAAGTGGACCTGAGCATGATGAATCATCTGAAACTATAAGCAACCGCTCACAATCA GAAAAGGGCGCACCATCTTCCCCGTATTATGAGCCACTTCAAGTGATACCACCTGAACAG AAATCTGGTCTAGAACCTTCCAGTCCCCATGTGGTAAAGCCAATCAAGAATGCACGGACA GACTATAAGGTATATGATGTAGAATTGGCTGCTCAAGGAAGCTACAAGGGCCATCGTGTG CCTCTTGTTTCTCTCATGAGTAAATGGAATGGTAAGCCCATTGTCGGTTACCCTATAACT GTGGAGGTTTTAAAAGATAGTAGTTCTGCGGCGAGCCGAAATGATCTGCGCCCAGCAACT AGCAGTCTTAACAACTTGCTAAAGAGGAGCGAACCTGCGGAACCAAGGCAAGCAAGATCG TCACATTCATCGAGACCTGCATCAAGACCAAAGCCCAGCGGTAAGAAAAAGATCTCAGAG CATGATACGGACAAGTCACGGCGGCCACACACAAAGAAATCAGCAACTTCACCGAGGAAA ATGCGTAGGCTCTCATCTTTCGCCAGCAGTCGTAGAGATGGTGCAAGCAGGAAGCCCGTA GTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCCGCTCCGACTTGTTTTCAGTAGG ATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGA

Peptide Sequence

PEP ID	Os01t0558500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:21140674:21143070:1 gene:Os01g0558500 transcript:Os01t0558500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:PWWP domain containing protein. (Os01t0558500-01);Hypothetical conserved gene. (Os01t0558500-02)
Sequence	EEESAKGLSQALTLYKQPQNVSSSSTRYASSSRKKHKASNDFEDDTVQGSQRMRDLTEIG SKKHSSYVLNGHRDLPLLESASFGYSLSGTNGIKGDPQSHSATKRKRSNIGQAYENSRKK DRRRPLSKLCKDSAVAVPAYSHWDPSGHSSAQYSGGKMSNAFEPSRGKFGFPLDVNNYSY SSGTSSVETLLDASCANHDGVAKVIPVKEAEVSCMPGFLNNDCSDGDEYFDTPLVMEEDA LEEDHLHKYESCASVKGQISKPRKQTAEYTELVIPSPHGHRSSKKKSMSFVSQRTQENHK DRTLLAQHGRTVKGQALDTDAVEVDARVSSAFCKPPALKNNMQLAIVPADGCASTLEQQY YGSGPEHDESSETISNRSQSEKGAPSSPYYEPLQVIPPEQKSGLEPSSPHVVKPIKNART DYKVYDVELAAQGSYKGHRVPLVSLMSKWNGKPIVGYPITVEVLKDSSSAASRNDLRPAT SSLNNLLKRSEPAEPRQARSSHSSRPASRPKPSGKKKISEHDTDKSRRPHTKKSATSPRK MRRLSSFASSRRDGASRKPVVGKISGPTIACIPLRLVFSRINEALSFPVRSENPT

Transcript Sequence

Transcript ID	Os01t0558500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:21140674:21143070:1 gene:Os01g0558500 gene_biotype:protein_coding transcript_biotype:protein_coding description:PWWP domain containing protein. (Os01t0558500-01);Hypothetical conserved gene. (Os01t0558500-02)
Sequence	GAAGAGGAGTCAGCTAAAGGTTTGTCTCAGGCCTTAACATTATATAAACAGCCACAGAAT GTGTCCTCTTCAAGCACTAGGTATGCTTCATCATCAAGGAAGAAACATAAGGCATCAAAT GATTTTGAGGATGACACAGTTCAAGGATCCCAACGTATGAGAGACCTTACGGAGATTGGA TCAAAGAAACACAGTTCATACGTCCTAAATGGGCACCGGGATCTACCACTTCTTGAGAGT GCAAGCTTTGGTTATAGCTTGTCTGGTACCAATGGGATAAAAGGTGATCCGCAGTCTCAT TCGGCAACAAAAAGGAAGCGTTCCAATATTGGCCAAGCTTATGAAAATTCAAGGAAGAAA GACAGACGTCGCCCTTTATCGAAGTTATGTAAAGATTCAGCTGTGGCAGTTCCAGCATAT AGCCACTGGGATCCTTCAGGGCATTCTTCTGCCCAGTACTCAGGAGGCAAAATGTCCAAT GCATTTGAACCAAGTAGGGGGAAATTTGGTTTCCCATTGGATGTAAATAATTATTCATAC AGCTCAGGGACCTCAAGTGTGGAAACTTTATTAGATGCATCATGCGCAAATCATGATGGT GTTGCCAAGGTAATTCCAGTAAAGGAAGCGGAGGTCTCATGCATGCCTGGGTTTCTCAAT AATGACTGCTCTGATGGCGATGAATATTTTGATACCCCCCTTGTTATGGAGGAAGATGCC CTCGAAGAAGATCATCTGCATAAATATGAATCATGTGCATCAGTCAAGGGCCAGATCTCA AAACCCAGGAAGCAAACTGCTGAATATACTGAACTGGTCATACCTTCACCTCATGGTCAC AGAAGTTCTAAGAAGAAAAGCATGAGCTTTGTTAGTCAAAGAACACAAGAAAACCACAAG GATAGGACTTTGTTGGCACAACATGGAAGAACAGTAAAAGGGCAAGCATTAGACACTGAT GCTGTTGAGGTGGATGCCAGGGTGAGCAGTGCTTTCTGTAAGCCCCCTGCACTTAAGAAC AATATGCAACTTGCAATAGTTCCTGCTGATGGTTGTGCCAGTACTTTGGAGCAACAGTAT TATGGAAGTGGACCTGAGCATGATGAATCATCTGAAACTATAAGCAACCGCTCACAATCA GAAAAGGGCGCACCATCTTCCCCGTATTATGAGCCACTTCAAGTGATACCACCTGAACAG AAATCTGGTCTAGAACCTTCCAGTCCCCATGTGGTAAAGCCAATCAAGAATGCACGGACA GACTATAAGGTATATGATGTAGAATTGGCTGCTCAAGGAAGCTACAAGGGCCATCGTGTG CCTCTTGTTTCTCTCATGAGTAAATGGAATGGTAAGCCCATTGTCGGTTACCCTATAACT GTGGAGGTTTTAAAAGATAGTAGTTCTGCGGCGAGCCGAAATGATCTGCGCCCAGCAACT AGCAGTCTTAACAACTTGCTAAAGAGGAGCGAACCTGCGGAACCAAGGCAAGCAAGATCG TCACATTCATCGAGACCTGCATCAAGACCAAAGCCCAGCGGTAAGAAAAAGATCTCAGAG CATGATACGGACAAGTCACGGCGGCCACACACAAAGAAATCAGCAACTTCACCGAGGAAA ATGCGTAGGCTCTCATCTTTCGCCAGCAGTCGTAGAGATGGTGCAAGCAGGAAGCCCGTA GTTGGCAAGATTAGTGGGCCTACAATCGCGTGCATCCCGCTCCGACTTGTTTTCAGTAGG ATCAACGAAGCTTTAAGTTTTCCAGTGAGATCAGAGAACCCTACATGAGGTGTGGGCTGC CAAGCCTGCGCTTGGAGATAGCCTGTGAACAGAGAGACATATTGCTAGTTTTGCATGTAC ATTAGCAGCCTTATAATTTTTATAAAAAAAATATTAATGCCTGCCATGTTCATATCAGCT ATGTGCTTGTAACCGTGTAATTGCGATTATCCGCCTTGGTTTCAGTTGAAGCATCCCACA GTGGGAGGAAAATAAGCACCTTGAAT