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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0555300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:20942303:20945721:-1 gene:Os01g0555300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0555300-01)
Sequence

ATGGCGCCGTCGTCGAGGAAAGAGAGGGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCG
TCTCCTGCGCCGGCCCCGGCGCCGGCGGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGC
CGGTGGACGAGCCGCCGGATATCGTTCTACGCCTCCCGCGCCTTCTTCCTCCTCATCATC
CTCCAGATCCCGCTCTTCAGGGTCCCTTGTAGAGCAGGCACATGCACAACGCCCATTCAA
GTTACATCTTCGCAGTTGGTCTCAAATGAGATATTCCCACCATCTGTTGTGAAAGCCCTT
CTCTTCCCTGGGGCTATAGCAAGCAACCTTACTAAGAGCATGACATTTCCTAGGTGGAAT
GACCTGTTTGATATTTACAATTTGACAGAAGCCAAGACCGCTTCAGCAGTAATTGATCTC
CAGCGTCTAGAGATTCTTGCTGGAAGCTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTC
ATAAACCCTGGGAGGATGACCTTGTTTGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAA
GAAGCGCTCTTTGGGAAACCGGTGAACAGTGATCCAACACAATCAGTTCATGTTTATCCG
ACCATTTTAATTGCACTGATTTGTGCATTCTTGTCAATAACTTACAATGTAAAGAAGACA
GTAAGAAATAGTCAGTCTGTTTCAATCACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAA
CTGAAGTAG

Peptide Sequence

PEP ID

Os01t0555300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:20942303:20945721:-1 gene:Os01g0555300 transcript:Os01t0555300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0555300-01)
Sequence

MAPSSRKERAAEARASTSKPSPAPAPAPAVQVQRRPVGGGRWTSRRISFYASRAFFLLII
LQIPLFRVPCRAGTCTTPIQVTSSQLVSNEIFPPSVVKALLFPGAIASNLTKSMTFPRWN
DLFDIYNLTEAKTASAVIDLQRLEILAGSYFCAAGALVGVINPGRMTLFGTLLVIWGLVK
EALFGKPVNSDPTQSVHVYPTILIALICAFLSITYNVKKTVRNSQSVSITKPLQSSAKSK
LK

Transcript Sequence

Transcript ID

Os01t0555300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:20942303:20945721:-1 gene:Os01g0555300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0555300-01)
Sequence

AAGCAAAGCATCTCGCGCCCTAGCCAAGCCAGCCATGGCGCCGTCGTCGAGGAAAGAGAG
GGCGGCGGAGGCGAGGGCGAGCACCTCCAAGCCGTCTCCTGCGCCGGCCCCGGCGCCGGC
GGTCCAGGTGCAGCGGCGGCCGGTGGGCGGGGGCCGGTGGACGAGCCGCCGGATATCGTT
CTACGCCTCCCGCGCCTTCTTCCTCCTCATCATCCTCCAGATCCCGCTCTTCAGGGTCCC
TTGTAGAGCAGGCACATGCACAACGCCCATTCAAGTTACATCTTCGCAGTTGGTCTCAAA
TGAGATATTCCCACCATCTGTTGTGAAAGCCCTTCTCTTCCCTGGGGCTATAGCAAGCAA
CCTTACTAAGAGCATGACATTTCCTAGGTGGAATGACCTGTTTGATATTTACAATTTGAC
AGAAGCCAAGACCGCTTCAGCAGTAATTGATCTCCAGCGTCTAGAGATTCTTGCTGGAAG
CTACTTCTGTGCTGCTGGAGCACTTGTTGGTGTCATAAACCCTGGGAGGATGACCTTGTT
TGGTACCCTTTTGGTTATCTGGGGTCTAGTGAAAGAAGCGCTCTTTGGGAAACCGGTGAA
CAGTGATCCAACACAATCAGTTCATGTTTATCCGACCATTTTAATTGCACTGATTTGTGC
ATTCTTGTCAATAACTTACAATGTAAAGAAGACAGTAAGAAATAGTCAGTCTGTTTCAAT
CACTAAGCCTCTGCAAAGTTCTGCCAAGTCGAAACTGAAGTAGACACTTCATTGTCTATT
TGCCCCTTCATCCTTGTAGTTCATTTCCACAAATTTATTGTTGAAGACTGGCCCAAAGGA
TAACACTACTGTGGTTCTTGTGTACCACTTTGAATACTGTAACCTTCAGTTTTCACCTTT
GTATCAAAGACTTATATCTATAACTTTTATTGCAAGCATATTCACTTT