Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0551000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:20662993:20665013:1 gene:Os01g0551000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0551000-01)
Sequence

ATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCG
CCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTC
GACGTCGACGCCGCGTCGCCCACGGCGGCGCCGTCGCTCGGGTCCTCCGTCGGCGTGCCG
TTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGTGGTGGTGGTCGCGCCAGAACACTTC
GCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGAGAGGGCACCTGTTTCTCACGGCGGC
GAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTC
GTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGAT
TCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGG
CCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTG
AGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCG
GCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCTCCTCGTCATCCTCGTCG
TCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGC
GACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACG
CGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATC
CGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAG

Peptide Sequence

PEP ID

Os01t0551000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:20662993:20665013:1 gene:Os01g0551000 transcript:Os01t0551000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0551000-01)
Sequence

MMGTEATATTTVSGGSGRAAPAALCLQAARGAWSRTSKVLDVDAASPTAAPSLGSSVGVP
FLWEEAPGRPKVVVVAPEHFAPPPPLAPAADERAPVSHGGEAAPASGGDRGDGDKARHVV
VPLKLPPRLQAAAAAAAAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGV
SLWRKATAAARGKKHDYDAAALDASCRSPASSSSSSSSSSSSSMSYFADDDHRRKADGHG
DPEPEADGEECGAKSTVRITRFKRNKSLPSVNTSHLWASIRRSVKQITPWS

Transcript Sequence

Transcript ID

Os01t0551000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:20662993:20665013:1 gene:Os01g0551000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0551000-01)
Sequence

ACTCCACATCTGTTTCCATCGCGAGCCACAGAGAGAGGGGGAGAGAGTGTGAGTGTGAGA
TCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACG
ACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCG
CGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCG
GCGCCGTCGCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGG
CCTAAGGTGGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCT
GCCGACGAGAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGAC
CGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTG
CAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTG
CACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCG
AGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCG
GCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCG
GCGTCGTCGTCCTCCTCCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGAC
GACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAG
GAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCG
AGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCA
TGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGC
AGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGAT
GACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAA
GGATAAAGGGTTAAGTTGCGAAAAAAAAGAGAAAAAGGTCATGTACTGAGTGAAAGAATT
TAGAGAGTTAGATGAACCCTCCGCTCGTTGCTTCGGGAATTTCTTTGTGTACCCTTTGTA
AATACCCCGGGATGCTCAGGAAAACAAAATGTAATAAACCAAACATTGGCTTGGC