Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0550200-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:20595249:20598788:1 gene:Os01g0550200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 16 description:Cyclin-like F-box domain containing protein. (Os01t0550200-00)
Sequence	ATGGACGGCTACCGGGCCCTGATCGCCGCCGGGGCCACCGCCGTCTGCTGCCTCGTCTGC GCCGTCTGGGCCTTCTCCTCCTCCTCCTCCTCCTCCGCCTCCAAGAAGCATCAGCGTCAG CGTCAGCAGCGTCCGCTGTCCCCGGGGTGCTGCGGCTGCGCCCGCTGCGGGTGCCGCGCC GCGGCCGTCAACGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCG CCCGCCGCCGCCGCCGCCGCCGCGGCCGCGGGGGCGTCCATGATGGAGCAGCTCGTGCCG GAGATCACCACCCACGCGCTCAGCTACCTCGACTACACCAGCCTCTGCCGCCTCTCCATG ACCAACTCCGCGATGCGCCGCGCCGCCAACGACGACGGCGCCTGGAAGGCGCTCTACCAC AAGGATTTTACAGTGGAGCAGCACAACATAACACCACCAAACGGATGGAAGGCATATTAT GCAGCTACAAAAGCCATCATGAACGTGAATACTGAGTTCTATAATATCATCAGGGAAGGG TCCTTGCCAGCAATGAGTCACTTCTGGCTTAACGCAGACTATGTCAAATGCATTCATGCT ACCGGAGAGCTTTTCACAGGATACAACGCAGTGATGGACAGCTGGGGCCTGTTATTCAAC TGGGGCCAGGATGGAGGGCAGGGCATTGCTTTCCAGCTACGGGATGTCCGAGCTCGTGTT CTCGGTGAGGTGGCATGGGTTAACATGAAGGCGCATGTTGATGTTGACCCTGGGCATTTC CATGTTACCAACGTATATGAGTTCCGTAATGGCAGGTGGTATATGGTTCATCACCATAGC TCGCTCATGGCTGACCCTGCTCCACATAATCTGTTTGCTTGA

Peptide Sequence

PEP ID	Os01t0550200-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:20595249:20598788:1 gene:Os01g0550200 transcript:Os01t0550200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 16 description:Cyclin-like F-box domain containing protein. (Os01t0550200-00)
Sequence	MDGYRALIAAGATAVCCLVCAVWAFSSSSSSSASKKHQRQRQQRPLSPGCCGCARCGCRA AAVNGEMAVGGEQKKAPGPSPAAAAAAAAAGASMMEQLVPEITTHALSYLDYTSLCRLSM TNSAMRRAANDDGAWKALYHKDFTVEQHNITPPNGWKAYYAATKAIMNVNTEFYNIIREG SLPAMSHFWLNADYVKCIHATGELFTGYNAVMDSWGLLFNWGQDGGQGIAFQLRDVRARV LGEVAWVNMKAHVDVDPGHFHVTNVYEFRNGRWYMVHHHSSLMADPAPHNLFA

Transcript Sequence

Transcript ID	Os01t0550200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20595249:20598788:1 gene:Os01g0550200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 16 description:Cyclin-like F-box domain containing protein. (Os01t0550200-00)
Sequence	TTCCCCACCACCACCATCGCCAAAACCCTAGCTTCCCCCAACCCCCCCGCCGTGGGATGG GATGCCGTCCCCCCACCGCCTGAGCGCCGCCGCCGCCGCCTGGATGTCCGCATGGACGGC TACCGGGCCCTGATCGCCGCCGGGGCCACCGCCGTCTGCTGCCTCGTCTGCGCCGTCTGG GCCTTCTCCTCCTCCTCCTCCTCCTCCGCCTCCAAGAAGCATCAGCGTCAGCGTCAGCAG CGTCCGCTGTCCCCGGGGTGCTGCGGCTGCGCCCGCTGCGGGTGCCGCGCCGCGGCCGTC AACGGCGAGATGGCCGTGGGCGGGGAGCAGAAGAAGGCGCCGGGGCCGTCGCCCGCCGCC GCCGCCGCCGCCGCGGCCGCGGGGGCGTCCATGATGGAGCAGCTCGTGCCGGAGATCACC ACCCACGCGCTCAGCTACCTCGACTACACCAGCCTCTGCCGCCTCTCCATGACCAACTCC GCGATGCGCCGCGCCGCCAACGACGACGGCGCCTGGAAGGCGCTCTACCACAAGGATTTT ACAGTGGAGCAGCACAACATAACACCACCAAACGGATGGAAGGCATATTATGCAGCTACA AAAGCCATCATGAACGTGAATACTGAGTTCTATAATATCATCAGGGAAGGGTCCTTGCCA GCAATGAGTCACTTCTGGCTTAACGCAGACTATGTCAAATGCATTCATGCTACCGGAGAG CTTTTCACAGGATACAACGCAGTGATGGACAGCTGGGGCCTGTTATTCAACTGGGGCCAG GATGGAGGGCAGGGCATTGCTTTCCAGCTACGGGATGTCCGAGCTCGTGTTCTCGGTGAG GTGGCATGGGTTAACATGAAGGCGCATGTTGATGTTGACCCTGGGCATTTCCATGTTACC AACGTATATGAGTTCCGTAATGGCAGGTGGTATATGGTTCATCACCATAGCTCGCTCATG GCTGACCCTGCTCCACATAATCTGTTTGCTTGAAGTTGAGCACAGAATCATTTGCAGCTA AACTTCATGACACATTTTTATGTTGCATGCTTCTTTTGCGGTTTAGACTGGTGATAGATT ATGAACATATTTGGGGAGAGCTTTATTTCGCAGTTTTCTCCGTTTATTCCTTTATCCTGA ATCTCCTGGCTGTTGATATCCCTTCAGTTTTTGTATAAATGTGT