Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0550100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:20581774:20589511:-1 gene:Os01g0550100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 6. (Os01t0550100-01);Similar to Ubiquitin-specific protease 6. (Os01t0550100-02)
Sequence	ATGCCGACCGTAAGCGTGAAATGGCAGAAGGAGACCTTCCCAGGCATAGAGATAGACACC AGCCAGCCGCCTGTTGTCTTTAAGACCCAGCTATACACTCTGACTGGTGTACCACCTGAA AGGCAAAAAATTATGGTGAAGGGTGGAATATTGAAGGATGATGCAGATTGGTCTACTTTG GGAGTGAAAGATGGTCAAAAATTGATGATGATAGGTACAGCTGATGAGATTGTGAAAGCT CCAGAGAAAGGACCAGTATTTGTAGAGGATCTACCAGAAGAAGAGCAAGTGGTTGCACTG GGACACAGTGCTGGTCTTTATAACTTGGGGAATACATGTTACATGAATTCCACTTTGCAG TGCCTGCATTCTGTTCCAGAGCTGAAGTCAGCTTTATTGAGTTATTCAGATAATGTGAGG GGTAATGGTGTTGACCAAGCCTCCCATAATTTGACTGTTGCAACTCGTAATACTTTCGGA GAGCTTGATCAAAGTGTTCGGCCTGTTGCACCTCTACTCTTCTTACAGACGCTGCGTAAA AAGTATCCCCAGTTTGCGCAACAACAAAATAATGTTTATATGCAACAGGATGCAGAAGAA TGCTGGACCCAATTGGTGTATACACTTTCTCAAACTCTTACATCAGAAACAAGTGAACCT CCTGCTGGTCAAATGAAGGAACTTTTTGGGATTGATCTCGTGAGCAGGGTCCATTGTGCA GAAAGTGGTGAAGAGAGTTTAGAGAGAGAATCAGTTTATTCTTTGAAGTGTCATATATCT CATGATGTAAACCACCTTCATGAAGGACTTAAGCATGGTTTGAAGTCAGAACTTGAGAAG GCTTCACCTTCACTGGGTCGCACTGCTCTTTATACAAGAGAGTCAAGAATAAATGAGTTG CCTAGGTACTTGACTGTGCAGTTTGTTCGTTTCTTTTGGAAAAGGGAATCAAACCAGAAG GCAAAGATTTTACGGAAAGTTGATTACCCGCTGGAACTGGATGTTTATGACTTTTGCTCA GATGAACTGAAACAAAAACTCCAAGCTCCCCGACAGATGCTGAGAGATGCAGAAAATGCT AAGTTTGGATTAAAAGCACAAGGAAAGGCCAGCAGCTCAAAAGAAAATGAGGGTTCATCA AGCAATGCTGGGGAATCATCCAGCATGGATATTGACAAAGCCGATTCTTCTGTGCCAAAG AAACATTTGACTGGCATCTATGATTTAATTGCTGTTTTGACGCACAAAGGGAGAAGTGCA GACTCAGGCCATTATGTTGGCTGGGTTAAGCAAGATGACGGGAAATGGATTGAATTTGAT GATGACAACCCTAGCATACGCAAGGAGGAAGAGATTTTAAAGTTATCTGGTGGAGGCGAC TGGCACATGGCTTACATTTGCCTGTACAAAGCTCGTGTTATCTGA

Peptide Sequence

PEP ID	Os01t0550100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:20581774:20589511:-1 gene:Os01g0550100 transcript:Os01t0550100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 6. (Os01t0550100-01);Similar to Ubiquitin-specific protease 6. (Os01t0550100-02)
Sequence	MPTVSVKWQKETFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDADWSTL GVKDGQKLMMIGTADEIVKAPEKGPVFVEDLPEEEQVVALGHSAGLYNLGNTCYMNSTLQ CLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGELDQSVRPVAPLLFLQTLRK KYPQFAQQQNNVYMQQDAEECWTQLVYTLSQTLTSETSEPPAGQMKELFGIDLVSRVHCA ESGEESLERESVYSLKCHISHDVNHLHEGLKHGLKSELEKASPSLGRTALYTRESRINEL PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDELKQKLQAPRQMLRDAENA KFGLKAQGKASSSKENEGSSSNAGESSSMDIDKADSSVPKKHLTGIYDLIAVLTHKGRSA DSGHYVGWVKQDDGKWIEFDDDNPSIRKEEEILKLSGGGDWHMAYICLYKARVI

Transcript Sequence

Transcript ID	Os01t0550100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20581774:20589511:-1 gene:Os01g0550100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 6. (Os01t0550100-01);Similar to Ubiquitin-specific protease 6. (Os01t0550100-02)
Sequence	TCCAAGTAAACTCGGTCTCCGCCGCCTCCTCCGCCGCCGCGCCGCCGATTCGCAGCCATG CCGACCGTAAGCGTGAAATGGCAGAAGGAGACCTTCCCAGGCATAGAGATAGACACCAGC CAGCCGCCTGTTGTCTTTAAGACCCAGCTATACACTCTGACTGGTGTACCACCTGAAAGG CAAAAAATTATGGTGAAGGGTGGAATATTGAAGGATGATGCAGATTGGTCTACTTTGGGA GTGAAAGATGGTCAAAAATTGATGATGATAGGTACAGCTGATGAGATTGTGAAAGCTCCA GAGAAAGGACCAGTATTTGTAGAGGATCTACCAGAAGAAGAGCAAGTGGTTGCACTGGGA CACAGTGCTGGTCTTTATAACTTGGGGAATACATGTTACATGAATTCCACTTTGCAGTGC CTGCATTCTGTTCCAGAGCTGAAGTCAGCTTTATTGAGTTATTCAGATAATGTGAGGGGT AATGGTGTTGACCAAGCCTCCCATAATTTGACTGTTGCAACTCGTAATACTTTCGGAGAG CTTGATCAAAGTGTTCGGCCTGTTGCACCTCTACTCTTCTTACAGACGCTGCGTAAAAAG TATCCCCAGTTTGCGCAACAACAAAATAATGTTTATATGCAACAGGATGCAGAAGAATGC TGGACCCAATTGGTGTATACACTTTCTCAAACTCTTACATCAGAAACAAGTGAACCTCCT GCTGGTCAAATGAAGGAACTTTTTGGGATTGATCTCGTGAGCAGGGTCCATTGTGCAGAA AGTGGTGAAGAGAGTTTAGAGAGAGAATCAGTTTATTCTTTGAAGTGTCATATATCTCAT GATGTAAACCACCTTCATGAAGGACTTAAGCATGGTTTGAAGTCAGAACTTGAGAAGGCT TCACCTTCACTGGGTCGCACTGCTCTTTATACAAGAGAGTCAAGAATAAATGAGTTGCCT AGGTACTTGACTGTGCAGTTTGTTCGTTTCTTTTGGAAAAGGGAATCAAACCAGAAGGCA AAGATTTTACGGAAAGTTGATTACCCGCTGGAACTGGATGTTTATGACTTTTGCTCAGAT GAACTGAAACAAAAACTCCAAGCTCCCCGACAGATGCTGAGAGATGCAGAAAATGCTAAG TTTGGATTAAAAGCACAAGGAAAGGCCAGCAGCTCAAAAGAAAATGAGGGTTCATCAAGC AATGCTGGGGAATCATCCAGCATGGATATTGACAAAGCCGATTCTTCTGTGCCAAAGAAA CATTTGACTGGCATCTATGATTTAATTGCTGTTTTGACGCACAAAGGGAGAAGTGCAGAC TCAGGCCATTATGTTGGCTGGGTTAAGCAAGATGACGGGAAATGGATTGAATTTGATGAT GACAACCCTAGCATACGCAAGGAGGAAGAGATTTTAAAGTTATCTGGTGGAGGCGACTGG CACATGGCTTACATTTGCCTGTACAAAGCTCGTGTTATCTGAATTGGAATGCCAGACAGG CTGATGAGCTGATTTGTTTACATTTCTCAAGTTGCCAGTAGTTTGCTTGCCTTTTGTAAT GCATGAGCGAACGTATTATTGATTTTTCCAGTTTGGTTCAAACTGAGAAGTAAGCATGTG ACTTGCATT