Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0549700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:20543454:20547043:1 gene:Os01g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:API5-INTERACTING PROTEIN 1 description:Similar to RNA helicase (Fragment). (Os01t0549700-01);Similar to cDNA clone:J033114G10, full insert sequence. (Os01t0549700-02);Similar to predicted protein. (Os01t0549700-03)
Sequence	GATGAATGTGACAAGATGCTCGATTCACTTGACATGCGTAGAGATGTGCAGGAGATCTTC AAAATGACACCCCATGATAAGCAAGTGATGATGTTTTCAGCGACCCTTAGCAAGGAGATC CGCCCAGTTTGCAAGAAATTCATGCAAGATCCTATGGAAATTTATGTTGATGATGAGGCT AAACTGACCCTTCATGGGCTAGTTCAGCACTATATTAAACTAAGTGAGGCGGAGAAGAAC CGGAAATTGAATGATCTCTTAGATGCACTGGACTTCAATCAAGTTGTGATATTTGTTAAA AGTGTTAGTAGAGCTGCAGAACTGAACAAGCTGCTTTGTGAATGCAACTTTCCTGCGATC TCCATACATTCTGGAATGACACAGGAGGAGAGGCTTACCCGGTACAAGAACTTCAAGGAA GGACACAAGAGGATTCTTGTGGCTACTGATTTAGTTGGCAGGGGAATTGATATTGAACGT GTCAACATTGTCATAAACTATGACATGCCCGATTCTGCTGATTCGTATCTACACAGGGTT GGAAGGGCTGGGCGTTTTGGAACCAAAGGACTTGCAATAACATTTGTTTCCTCTGCCTCT GACTCTGATGTTCTTAATCAAGTGCAAGAAAGATTCGAGGTTGACATAAAGGAGCTTCCT GAGCAGATTGATACTTCGACATATATGCCTTCTTAA

Peptide Sequence

PEP ID	Os01t0549700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:20543454:20547043:1 gene:Os01g0549700 transcript:Os01t0549700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:API5-INTERACTING PROTEIN 1 description:Similar to RNA helicase (Fragment). (Os01t0549700-01);Similar to cDNA clone:J033114G10, full insert sequence. (Os01t0549700-02);Similar to predicted protein. (Os01t0549700-03)
Sequence	DECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA KLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAI SIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRV GRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS

Transcript Sequence

Transcript ID	Os01t0549700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20543454:20547043:1 gene:Os01g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:API5-INTERACTING PROTEIN 1 description:Similar to RNA helicase (Fragment). (Os01t0549700-01);Similar to cDNA clone:J033114G10, full insert sequence. (Os01t0549700-02);Similar to predicted protein. (Os01t0549700-03)
Sequence	TTGATGAATGTGACAAGATGCTCGATTCACTTGACATGCGTAGAGATGTGCAGGAGATCT TCAAAATGACACCCCATGATAAGCAAGTGATGATGTTTTCAGCGACCCTTAGCAAGGAGA TCCGCCCAGTTTGCAAGAAATTCATGCAAGATCCTATGGAAATTTATGTTGATGATGAGG CTAAACTGACCCTTCATGGGCTAGTTCAGCACTATATTAAACTAAGTGAGGCGGAGAAGA ACCGGAAATTGAATGATCTCTTAGATGCACTGGACTTCAATCAAGTTGTGATATTTGTTA AAAGTGTTAGTAGAGCTGCAGAACTGAACAAGCTGCTTTGTGAATGCAACTTTCCTGCGA TCTCCATACATTCTGGAATGACACAGGAGGAGAGGCTTACCCGGTACAAGAACTTCAAGG AAGGACACAAGAGGATTCTTGTGGCTACTGATTTAGTTGGCAGGGGAATTGATATTGAAC GTGTCAACATTGTCATAAACTATGACATGCCCGATTCTGCTGATTCGTATCTACACAGGG TTGGAAGGGCTGGGCGTTTTGGAACCAAAGGACTTGCAATAACATTTGTTTCCTCTGCCT CTGACTCTGATGTTCTTAATCAAGTGCAAGAAAGATTCGAGGTTGACATAAAGGAGCTTC CTGAGCAGATTGATACTTCGACATATATGCCTTCTTAAAGATCCGGGTGGATTGCTTAAA GCTTACATTCGAACGGAAACGAGAGTATCTCCTTGAGATACGGCATATTAAGAATCTATC GGATAACTAAAAACTTAGTGTGAGAAATGCTGCCCTATCTATACTTAGACAGCAGTTTAG ATCTGCTGCTAAGTGCTGAATGCCCCGTAATAATACTTGAAATGATGTATCTGGGCAATT GGGCATGTACGTATTTGAATTGCAGTCGTTCATTGTAATTCCGAGAATTTTATTAGGATT TGTTTGTGTTAATTTTGCTACTCCGCAGATGCTAACGTGGGTTAGTTTATAGTACTTTGT TTATGGTACTTTTGAGGATTTC