Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0549300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:20518681:20521502:-1 gene:Os01g0549300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os01t0549300-01)
Sequence	AAGCGACGGGAGCTGCGTCCTCTCGCGAGGCGACGGCGACGACCCGTGCTCCGAGGCGGA AGAGGCAAGCTCAGCACCGTTGTACGAGCTCGTCGTCCCGAGGCGACGGCGCGGCAGGAT CTCGCGCGGAGAGCGCGCGTGCGGGAAATTTCCCCGCAAAATCCAGGTAGGAAGAAGAAG GGAGGCACACCTGAGGCCTCAGATGCGGCGGCGGCAGCCCCAGCCCGTACCCTAGGTTGT GGTGTTGGGTCGGCGACGGCGGCTCTCCCCTTCAGTCGTGGCGGCCGCGGTGTCGGGTTA GCACCGCCGCCCCGCTCTCTCGGCCGTGGTGGCGGGCCAGCAGTGGCAGCAATCCCTCCA GGCGGCTTCCCCAGTTATTCAGCGTCCATGGATGGATTTCCCTTCCCTCCACCTTTTGAT GGATCCTACAGAGGTGGATTCCCCAGCTCTTCAGCTTGGTTGGATGCGTCCGGTGGTGAT GAATCTTCTCCTGGATCATGGGATAAAGATGTACATCCACGTGGTGGTTTCATGAGCTAT TTTGGAAATCATGCACAAAACTCTCATTTGGTTGGTGCGCCTATTTACATTGCTGATGCT AGTTCACCACCAGAGGTGGAAATTTTACAAGGCAATGATGATGGAAATGGCAATGGCAAT GTTAGGACTGAGAAGAGGATACTGTGGACAGAGGAAGAGGATATCATATTGATGAGTGCT TGGATAGAGCATTCAACTGACTCTACATGTGGAGCAGATAAGGGAGGTGGCCAATATTGG GGTGAAGTTGTTGAATCGTACAACAAGACTACCCCACCTCTCAGAAAAAGAAATCTGAAG CAATGCAAGGATAGATGGCACAAGATTAATAGGTGGACGGATCTCTTTGAGTGTGCTTAT GTAAAGGCTCGTAGAATTTTTACAAGTGGATATTCTAATCAAATGTGGATTGATGCAGCA CACAAGTTTTATGTGGATGACAATAAAGAGGCAAAGCTAGGACCCTTTGTGCTGATGGAG GTTTGGAAAATATGCCGAGAAGTCTCAAAGTGGAAAACATACAATGATAACCTGAGGAAT GCACGTAAAAGGAAATCATTTCACTTGGAAGGAGACTCTGAGGAAGCTGATGACACTTTT GATGAGATGCCAAAGCGACCAATGGGTCAGAAGGCCGCTAAAAAGGCAGCTCTAGATGCA AAAATCAAGTCAAATGGTTTGGGCAGTAGTGATGATGGTCACTCAAAGGAGTCTCCTATT CAGTTAGACAAATTTGATAGATATAGCAAATTCCAGGAGGAAAACAATGACAAGCGCATG AAACTATTGGACAGACAGGAAAAAATATCTTCTGAGAAGCTAGAGGCCACAAAAATTGCC CACCTTACAGCACAAGAGTACAAAGAAGGAAGGAAGCTTGAGAAAGAGTCAAAGATGATG GAGACTTATAACAGCCTCATCTCACAAGATACAAGTTCAATGTCTGCTGAGGAAAAGGCG CAGCGAGTTAGTATGATGAAGTGTCTTATGAAAACTCTTTTCCCTGAATCTGATTGA

Peptide Sequence

PEP ID	Os01t0549300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:20518681:20521502:-1 gene:Os01g0549300 transcript:Os01t0549300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os01t0549300-01)
Sequence	KRRELRPLARRRRRPVLRGGRGKLSTVVRARRPEATARQDLARRARVREISPQNPGRKKK GGTPEASDAAAAAPARTLGCGVGSATAALPFSRGGRGVGLAPPPRSLGRGGGPAVAAIPP GGFPSYSASMDGFPFPPPFDGSYRGGFPSSSAWLDASGGDESSPGSWDKDVHPRGGFMSY FGNHAQNSHLVGAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWTEEEDIILMSA WIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAY VKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKICREVSKWKTYNDNLRN ARKRKSFHLEGDSEEADDTFDEMPKRPMGQKAAKKAALDAKIKSNGLGSSDDGHSKESPI QLDKFDRYSKFQEENNDKRMKLLDRQEKISSEKLEATKIAHLTAQEYKEGRKLEKESKMM ETYNSLISQDTSSMSAEEKAQRVSMMKCLMKTLFPESD

Transcript Sequence

Transcript ID	Os01t0549300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20518681:20521502:-1 gene:Os01g0549300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os01t0549300-01)
Sequence	AAGCGACGGGAGCTGCGTCCTCTCGCGAGGCGACGGCGACGACCCGTGCTCCGAGGCGGA AGAGGCAAGCTCAGCACCGTTGTACGAGCTCGTCGTCCCGAGGCGACGGCGCGGCAGGAT CTCGCGCGGAGAGCGCGCGTGCGGGAAATTTCCCCGCAAAATCCAGGTAGGAAGAAGAAG GGAGGCACACCTGAGGCCTCAGATGCGGCGGCGGCAGCCCCAGCCCGTACCCTAGGTTGT GGTGTTGGGTCGGCGACGGCGGCTCTCCCCTTCAGTCGTGGCGGCCGCGGTGTCGGGTTA GCACCGCCGCCCCGCTCTCTCGGCCGTGGTGGCGGGCCAGCAGTGGCAGCAATCCCTCCA GGCGGCTTCCCCAGTTATTCAGCGTCCATGGATGGATTTCCCTTCCCTCCACCTTTTGAT GGATCCTACAGAGGTGGATTCCCCAGCTCTTCAGCTTGGTTGGATGCGTCCGGTGGTGAT GAATCTTCTCCTGGATCATGGGATAAAGATGTACATCCACGTGGTGGTTTCATGAGCTAT TTTGGAAATCATGCACAAAACTCTCATTTGGTTGGTGCGCCTATTTACATTGCTGATGCT AGTTCACCACCAGAGGTGGAAATTTTACAAGGCAATGATGATGGAAATGGCAATGGCAAT GTTAGGACTGAGAAGAGGATACTGTGGACAGAGGAAGAGGATATCATATTGATGAGTGCT TGGATAGAGCATTCAACTGACTCTACATGTGGAGCAGATAAGGGAGGTGGCCAATATTGG GGTGAAGTTGTTGAATCGTACAACAAGACTACCCCACCTCTCAGAAAAAGAAATCTGAAG CAATGCAAGGATAGATGGCACAAGATTAATAGGTGGACGGATCTCTTTGAGTGTGCTTAT GTAAAGGCTCGTAGAATTTTTACAAGTGGATATTCTAATCAAATGTGGATTGATGCAGCA CACAAGTTTTATGTGGATGACAATAAAGAGGCAAAGCTAGGACCCTTTGTGCTGATGGAG GTTTGGAAAATATGCCGAGAAGTCTCAAAGTGGAAAACATACAATGATAACCTGAGGAAT GCACGTAAAAGGAAATCATTTCACTTGGAAGGAGACTCTGAGGAAGCTGATGACACTTTT GATGAGATGCCAAAGCGACCAATGGGTCAGAAGGCCGCTAAAAAGGCAGCTCTAGATGCA AAAATCAAGTCAAATGGTTTGGGCAGTAGTGATGATGGTCACTCAAAGGAGTCTCCTATT CAGTTAGACAAATTTGATAGATATAGCAAATTCCAGGAGGAAAACAATGACAAGCGCATG AAACTATTGGACAGACAGGAAAAAATATCTTCTGAGAAGCTAGAGGCCACAAAAATTGCC CACCTTACAGCACAAGAGTACAAAGAAGGAAGGAAGCTTGAGAAAGAGTCAAAGATGATG GAGACTTATAACAGCCTCATCTCACAAGATACAAGTTCAATGTCTGCTGAGGAAAAGGCG CAGCGAGTTAGTATGATGAAGTGTCTTATGAAAACTCTTTTCCCTGAATCTGATTGAACA GATATGTCAATTTTGCAAGTGGAGGCTACTATCTTTGGCTATCTGGTGAATGCCAAATTA TCTTGCTGTTTTTTCTATCCTAAACCAACTTTTCCACTTTTTCTATCCTAAACTCTGGCT ATTGGCAAGTTATGTTTAATCTTTCAGCAGGTTCAGTGTATGTCTCAGTTTATATAATTT TTGTTCATGCTCAATCCACTAAGCCTATTTTGGTGCTTGTTCAGTGATACACTATACTAC TAATATGGAGTATATATAATCTAGGGAAAAAGATGGGCATATTAGCCTTTTATTGC