Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0547600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:20385993:20388511:-1 gene:Os01g0547600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:High-affinity nitrate transporter, Nitrate transport, Auxin signaling (Os01t0547600-01)
Sequence	ATGGTCGCCATGGAGAAGAAGACGAAGCTGGTGGAAGAAGAAGATGGCTGCTACTACTAC GACTACGGCGGCTATGGCGATGGCGTCGTCGACGACGAGGGGAGGGCGACGGAGCTGCGG CCGATGGCGCTGTCGCGGCCGCACACGCAGGCGTTCCACCTGGCGTGGATGTCCCTCTTC GCGTGCTTCTTCGCCGCCTTCGCCGCGCCGCCCATCCTCCCGGCGATGCGCCCGGCGCTC GTGCTCGCGCCCTCCGACGCCTCGGCGGCCGCCGTGGCCTCGCTCTCGGCGACGCTGGTG GGGAGGCTCGCCATGGGCCCCGCCTGCGACCTCCTCGGCCCGCGCCGCGCGTCCGGGGTC GCCAGCCTCGTGTGCGCGCTGGCGCTCGCGCTCGCCGCCGTGTTCGCGTCCTCCCCCGCG GGGTTCGTCGCGCTCCGGTTCGTGGCTGGCCTCTCGCTCGCCAACTTCGTCGCCAACCAG CACTGGATGTCGCGGATCTTCGCGCCCTCCGCCGTGGGGCTCGCCAACGCCGTCGCCGCC GGGTGGGCGAACGTCGGCAGCGCCGCCGCGCAGGTGGTCATGCCGGTCGCCTACGACGCC GTCGTGCTCCGCCTCGGCGTCCCCGTCACCGTCGCGTGGCGCGTCACCTACCTACTCCCG TGCGCCATGCTCGTCACCACGGGCCTCGCCGTGCTCGCCTTCCCCTACGACCTCCCGGGC GGCGGCGGTGGTCGCTGCCCCGGCGGCGGCGGCGGGCGGAGGAGGAGCTTCTGGGCGGTG GTGCGGGGCGGCGTCGGCGACTACCGAGCGTGGTTGCTGGGCCTCACCTACGGCCACTGC TACGGCGTGGAGCTGATCATGGAGAACGTGGCGGCGGACTTCTTCCGCAGGCGGTTCCGG CTGCCCATGGAGGCCGCGGGCGCCGCCGCGGCGTGCTTCGGCGCGATGAACGCGGTGGCG CGGCCGGCCGGAGGGGTGGCCTCCGACGAGGTGGCGAGGCGGTTCGGGATGCGCGGGCGG CTGTGGGCGCTGTGGGCCGTGCAGAGCGCCGGCGCCGCGCTCTGTGTGCTCGTCGGCAGG ATGGGCGCCGCGGAGGCGCCGTCGCTGGCGGCGACCGTGGCCGTCATGGTGGCGTGCGCG GCGTTCGTGCAGGCCGCCTCCGGCCTCACCTTCGGCATCGTTCCCTTCGTCTGCAAAAGG TCGCTGGGCGTGGTGTCGGGCATGACGGCGAGCGGCGGCGCGGTGGGGGCGATCGTGACG AACCGGCTCTTCTTCAGCGGGTCCAGGTACACGGTGGAGGAGGCCATCTCCTGCACCGGC ATCACCAGCCTCCTCTGCACGCTCCCCGTCGCCCTCATCCATTTCCGGCGACAGGGCGGC ATGTTCTGTGGCCCATCGGCCACGATCGACGGCGACGGCGATGTTGATGACGATGATGAT TACATGCTTCTGAAATGA

Peptide Sequence

PEP ID	Os01t0547600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:20385993:20388511:-1 gene:Os01g0547600 transcript:Os01t0547600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:High-affinity nitrate transporter, Nitrate transport, Auxin signaling (Os01t0547600-01)
Sequence	MVAMEKKTKLVEEEDGCYYYDYGGYGDGVVDDEGRATELRPMALSRPHTQAFHLAWMSLF ACFFAAFAAPPILPAMRPALVLAPSDASAAAVASLSATLVGRLAMGPACDLLGPRRASGV ASLVCALALALAAVFASSPAGFVALRFVAGLSLANFVANQHWMSRIFAPSAVGLANAVAA GWANVGSAAAQVVMPVAYDAVVLRLGVPVTVAWRVTYLLPCAMLVTTGLAVLAFPYDLPG GGGGRCPGGGGGRRRSFWAVVRGGVGDYRAWLLGLTYGHCYGVELIMENVAADFFRRRFR LPMEAAGAAAACFGAMNAVARPAGGVASDEVARRFGMRGRLWALWAVQSAGAALCVLVGR MGAAEAPSLAATVAVMVACAAFVQAASGLTFGIVPFVCKRSLGVVSGMTASGGAVGAIVT NRLFFSGSRYTVEEAISCTGITSLLCTLPVALIHFRRQGGMFCGPSATIDGDGDVDDDDD YMLLK

Transcript Sequence

Transcript ID	Os01t0547600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20385993:20388511:-1 gene:Os01g0547600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:High-affinity nitrate transporter, Nitrate transport, Auxin signaling (Os01t0547600-01)
Sequence	ACCGCTCGCGCCAAAATCTAAACCCCTCCCCTCATTGGCCAGCTCGTTAATTGATTCCAT CGTTTAATTTCCGCCACGAATTCGAGCTAGCTCTGCCCCTCCATCTCCATGGTCGCCATG GAGAAGAAGACGAAGCTGGTGGAAGAAGAAGATGGCTGCTACTACTACGACTACGGCGGC TATGGCGATGGCGTCGTCGACGACGAGGGGAGGGCGACGGAGCTGCGGCCGATGGCGCTG TCGCGGCCGCACACGCAGGCGTTCCACCTGGCGTGGATGTCCCTCTTCGCGTGCTTCTTC GCCGCCTTCGCCGCGCCGCCCATCCTCCCGGCGATGCGCCCGGCGCTCGTGCTCGCGCCC TCCGACGCCTCGGCGGCCGCCGTGGCCTCGCTCTCGGCGACGCTGGTGGGGAGGCTCGCC ATGGGCCCCGCCTGCGACCTCCTCGGCCCGCGCCGCGCGTCCGGGGTCGCCAGCCTCGTG TGCGCGCTGGCGCTCGCGCTCGCCGCCGTGTTCGCGTCCTCCCCCGCGGGGTTCGTCGCG CTCCGGTTCGTGGCTGGCCTCTCGCTCGCCAACTTCGTCGCCAACCAGCACTGGATGTCG CGGATCTTCGCGCCCTCCGCCGTGGGGCTCGCCAACGCCGTCGCCGCCGGGTGGGCGAAC GTCGGCAGCGCCGCCGCGCAGGTGGTCATGCCGGTCGCCTACGACGCCGTCGTGCTCCGC CTCGGCGTCCCCGTCACCGTCGCGTGGCGCGTCACCTACCTACTCCCGTGCGCCATGCTC GTCACCACGGGCCTCGCCGTGCTCGCCTTCCCCTACGACCTCCCGGGCGGCGGCGGTGGT CGCTGCCCCGGCGGCGGCGGCGGGCGGAGGAGGAGCTTCTGGGCGGTGGTGCGGGGCGGC GTCGGCGACTACCGAGCGTGGTTGCTGGGCCTCACCTACGGCCACTGCTACGGCGTGGAG CTGATCATGGAGAACGTGGCGGCGGACTTCTTCCGCAGGCGGTTCCGGCTGCCCATGGAG GCCGCGGGCGCCGCCGCGGCGTGCTTCGGCGCGATGAACGCGGTGGCGCGGCCGGCCGGA GGGGTGGCCTCCGACGAGGTGGCGAGGCGGTTCGGGATGCGCGGGCGGCTGTGGGCGCTG TGGGCCGTGCAGAGCGCCGGCGCCGCGCTCTGTGTGCTCGTCGGCAGGATGGGCGCCGCG GAGGCGCCGTCGCTGGCGGCGACCGTGGCCGTCATGGTGGCGTGCGCGGCGTTCGTGCAG GCCGCCTCCGGCCTCACCTTCGGCATCGTTCCCTTCGTCTGCAAAAGGTCGCTGGGCGTG GTGTCGGGCATGACGGCGAGCGGCGGCGCGGTGGGGGCGATCGTGACGAACCGGCTCTTC TTCAGCGGGTCCAGGTACACGGTGGAGGAGGCCATCTCCTGCACCGGCATCACCAGCCTC CTCTGCACGCTCCCCGTCGCCCTCATCCATTTCCGGCGACAGGGCGGCATGTTCTGTGGC CCATCGGCCACGATCGACGGCGACGGCGATGTTGATGACGATGATGATTACATGCTTCTG AAATGAAACGGAAAAAAAATACCCAGCTATATATATTTGTACATGTGTATCTGTGTATAA GATCTCATCTACTGTATCATAGCATGTAAAAAGTTAGTAGGAGGAAAAGATTAGGAAGAG TAGTCAATATGGTCCCTGTTTTAGATAGAGGATTGAAGATAGTTTGTGAATCCGTTTTTT GATGGAATATATTTATGAATTGCATGGA