Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0547000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:20327992:20334833:1 gene:Os01g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR19. (Os01t0547000-01)
Sequence	ATGGCGGAGGGCGTTGTAGGATCGCTGATCGGCAAGCTTGGTGCGGCCTTGGCGAAAGAG GCAGCAACCTACGGCGCATCGCTGCTCTGCCAGGAAGTCTCTGCTCTCAAGCGTCTCTTT GCCCAGATCCGGGACGTCAAGGACGAGCTGGAGAGCATGGAGGCCTACCTCCATGGAGCT GAGCGGTTCAAGGACATCGACGAGACTACTGGAAACTATGTCAAGAAGATCCGAGGGCTG GCTTTCGAGATCGAGGATGCTGTTGACGAGTTCACCTACAAGCTGGAGGACAAGCATGGG GGATTCACTGCCAAGATGAAGAAAAGGATCAAGCATGTCAAGGCATGGCGTCGTCTCGCA CTCAAGCTGCAAGACATCAAGCAAAGGCTTAAAAATGCCGACGAGAGGAAGATCCGTTAT GATCTGAGTGGGATTGAAAAGAATGGTCACTCTAAATCCCCTGAACAATCTTTTCAGTTT GCGAGGGAAGAGGATCTTGTGGGGATTGAGATAAATAAGGAGTTGCTGATGCAGTGGCTT GTGGGTGATTCGGAACAAGGGTGTAAAATTGCAACAGTTTGGGGGATGGGAGGTGTGGGA AAGACCACTTTGGTTTCCCAGGTGTACAAGACTGTGAAATTGGATTTTGATGTTTCTGGA TTCGTGACTGTCACAAACAGCTACCAGTTTGATGATCTATTGAAGAAGATCTCCACAGAG TTCGAAATTCCAATCGACGCTGATAACATTGCAGTGGGAAGCCTAGTTGAGAGCATTCAT CACCATCTGCAAGGTAAAAGGTACATTTTGGTTCTTGACGATGTTTGGCAACCGGATGTT TGGTTTAAGCTAAGGAATGCGTTTCCTACTGAAAGCACTGGTCGGTTTATTTTCACTACT AGAATGCAGGAAGTAGCATTGCTAGCAACTAAAAAATGTACAATTGAGTTAGCACCGTTA GATGCACATTGTTCATGGCAGTTGTTCTGCAAAGAAGCATTTTGGAACGCTGACAACAAA ACATGCCCTGAGGAACTACAAGATATAGCTTCGATGTTTGTAGATAAGTGTGCTGGCTTG CCCATTGCCATTGCATGCATAGGCCGCTTATTATCCTGCAAACACCCGATATACTCTGAA TGGGAACATGTGTACAAGGACTTAGAGCTTCAGCTCACCAACAATGTGATCCTTGATGTT GATATTGTTCTGAAAGTCAGCTTGGAGGATCTTCAACGTAATTTGAAGAACTGTTTTTTG CACTGCACAATATTTCCAGAAAGTTATGCATTCAACAGAAAAAGATTAATCAGACATTGG ATAGCAGCTGGATACATTCAAGAGGTAGGTAGCAAAACAGTAGAGGAAGTGGCAGAGGGC TACTTAAATGAACTTGTAAACAGAAGCCTGTTACAGGTAGTTGAGCGCAATCTATCTGGT CGAGTTCGCAGGTGCCGAATGCATGACATAATCCGTTTACTTGCCCTCAGAAAATCGAAG GAGGAATTTTTTTGTCAAGTTTACAAGGGCTCTGAGGCATGTTCAATCGAGAATACACGT CGTTTATCAATCCAAAATGTAAGTATTCAACACCTTTCTGGATCAAGTGCACCATGTCTC CGATCCCTCCATGTTTTCAGTATTTATCGGAGAATTGATTCGCTGGAGGCTTTCCTCAAA TCATTCAAGTTTCTGTCAACGTTGGATCTTCAAGGTATTTCAATCAAGAGGCTACCTAAG ATTGTTTTTGACTTGTTTAATCTACGGTTCTTGGGTCTTCGCAAAACATATATCGAGTAT CTCCCAAAAGAACTGAGTAGGTTACAGAATTTGGAAGTCCTGGATGCTTATGATTCTAAG CTATTGATTCTTCCAGTGGAAGTGGCCACACTTTGGAAACTGAAATATCTATATGTGGTA AGAGTTCCAGAGGGATCTTATGATAGAGTTCTTGCTTTTGACGGCCTCCAAGTGCCTATG GGTATCTGTAATTTGATTGACTTGCTGGCCCTGCAACTTATCGAAGCTAGCACTGAGGTT CTGCGTCATATTGGATGTTTAACCAAGTTAAGAACCTTTGCAATCGGTAAAGTTAGAAAT GAACACTGTGCAGATTTGTGCGACGCAATCATGAGAATGACTTGTCTTGTTCATATTACA ATCATTTCAGCTGATGAGAAAGAAGTGCTACAGTTAGAAACACTTTGTTTACCTTCTACT ATTGCAAAGATTGATCTAGGGGGCAGGCTAAGCAAGGAATCCATGTCACAGTTGATCTCA ACCAGTTCAAACCTCGTTAACCTTACTGAATTAAACTTGTGCTTCTCCAAACTCAATGAA GACTCTTTTGCTTGCATCTTGAATTTACACAACTTAGTTGAGCTTTATCTTTCAAAGGCT TATGACGGAAAGGAACTAATCTTCCATGCAACATCATTTCCGAAACTCAAATTACTAGCA GTATGGGATGCTCCTTATCTCAGAAAAGTTGCAATCCAACAAGGTGCGCTACAAAGTCTT GTTAGGCTATGGCTAGCTGATTGTCCAGAATTAAGGGATGTTCCTGATGGCATCGAGCAT CTGAGAACCCTTGAGCATCTGAGAATTAAGGGAAGTTCAGATGAGCTCTGGAGGAAGCTT GAGATAAAAGGAAAATCGAACAAACGCAATGAAGATAGAATGAAGATCAGCCATGTCAAA TGGGTCGAAATTGTTTAG

Peptide Sequence

PEP ID	Os01t0547000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:20327992:20334833:1 gene:Os01g0547000 transcript:Os01t0547000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR19. (Os01t0547000-01)
Sequence	MAEGVVGSLIGKLGAALAKEAATYGASLLCQEVSALKRLFAQIRDVKDELESMEAYLHGA ERFKDIDETTGNYVKKIRGLAFEIEDAVDEFTYKLEDKHGGFTAKMKKRIKHVKAWRRLA LKLQDIKQRLKNADERKIRYDLSGIEKNGHSKSPEQSFQFAREEDLVGIEINKELLMQWL VGDSEQGCKIATVWGMGGVGKTTLVSQVYKTVKLDFDVSGFVTVTNSYQFDDLLKKISTE FEIPIDADNIAVGSLVESIHHHLQGKRYILVLDDVWQPDVWFKLRNAFPTESTGRFIFTT RMQEVALLATKKCTIELAPLDAHCSWQLFCKEAFWNADNKTCPEELQDIASMFVDKCAGL PIAIACIGRLLSCKHPIYSEWEHVYKDLELQLTNNVILDVDIVLKVSLEDLQRNLKNCFL HCTIFPESYAFNRKRLIRHWIAAGYIQEVGSKTVEEVAEGYLNELVNRSLLQVVERNLSG RVRRCRMHDIIRLLALRKSKEEFFCQVYKGSEACSIENTRRLSIQNVSIQHLSGSSAPCL RSLHVFSIYRRIDSLEAFLKSFKFLSTLDLQGISIKRLPKIVFDLFNLRFLGLRKTYIEY LPKELSRLQNLEVLDAYDSKLLILPVEVATLWKLKYLYVVRVPEGSYDRVLAFDGLQVPM GICNLIDLLALQLIEASTEVLRHIGCLTKLRTFAIGKVRNEHCADLCDAIMRMTCLVHIT IISADEKEVLQLETLCLPSTIAKIDLGGRLSKESMSQLISTSSNLVNLTELNLCFSKLNE DSFACILNLHNLVELYLSKAYDGKELIFHATSFPKLKLLAVWDAPYLRKVAIQQGALQSL VRLWLADCPELRDVPDGIEHLRTLEHLRIKGSSDELWRKLEIKGKSNKRNEDRMKISHVK WVEIV

Transcript Sequence

Transcript ID	Os01t0547000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20327992:20334833:1 gene:Os01g0547000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR19. (Os01t0547000-01)
Sequence	AAGAACTCAAAAAAGAAAAAAAAAAGTCTGCCTGTTCTCCTTCTCTCTCCCCTTCGCACC TGTTCACCTCTCCGGCGACGAGATGGTCCCAACCTGCAGCCTGTCCTCGATGCCTAGCGA ACACCGCCGGCCGCGGAGACCTCGGCTCCGGAGGCGGGGGATCTTCCTGTGTGCCCCTCC AGTTCCAGCGCGGGATCGATCCGGTCGTAGGATCTGGCGGCTCTCGTCCACGCCCTCGTC GCCGCCGGCTGCTAGCTACAACGTCCACGAATCTGGCCATATCCACTTCTACTCTGTGGA GATCTGAATCAAGCACACTGCACACTGCACACACACAGAAACCATGGCGGAGGGCGTTGT AGGATCGCTGATCGGCAAGCTTGGTGCGGCCTTGGCGAAAGAGGCAGCAACCTACGGCGC ATCGCTGCTCTGCCAGGAAGTCTCTGCTCTCAAGCGTCTCTTTGCCCAGATCCGGGACGT CAAGGACGAGCTGGAGAGCATGGAGGCCTACCTCCATGGAGCTGAGCGGTTCAAGGACAT CGACGAGACTACTGGAAACTATGTCAAGAAGATCCGAGGGCTGGCTTTCGAGATCGAGGA TGCTGTTGACGAGTTCACCTACAAGCTGGAGGACAAGCATGGGGGATTCACTGCCAAGAT GAAGAAAAGGATCAAGCATGTCAAGGCATGGCGTCGTCTCGCACTCAAGCTGCAAGACAT CAAGCAAAGGCTTAAAAATGCCGACGAGAGGAAGATCCGTTATGATCTGAGTGGGATTGA AAAGAATGGTCACTCTAAATCCCCTGAACAATCTTTTCAGTTTGCGAGGGAAGAGGATCT TGTGGGGATTGAGATAAATAAGGAGTTGCTGATGCAGTGGCTTGTGGGTGATTCGGAACA AGGGTGTAAAATTGCAACAGTTTGGGGGATGGGAGGTGTGGGAAAGACCACTTTGGTTTC CCAGGTGTACAAGACTGTGAAATTGGATTTTGATGTTTCTGGATTCGTGACTGTCACAAA CAGCTACCAGTTTGATGATCTATTGAAGAAGATCTCCACAGAGTTCGAAATTCCAATCGA CGCTGATAACATTGCAGTGGGAAGCCTAGTTGAGAGCATTCATCACCATCTGCAAGGTAA AAGGTACATTTTGGTTCTTGACGATGTTTGGCAACCGGATGTTTGGTTTAAGCTAAGGAA TGCGTTTCCTACTGAAAGCACTGGTCGGTTTATTTTCACTACTAGAATGCAGGAAGTAGC ATTGCTAGCAACTAAAAAATGTACAATTGAGTTAGCACCGTTAGATGCACATTGTTCATG GCAGTTGTTCTGCAAAGAAGCATTTTGGAACGCTGACAACAAAACATGCCCTGAGGAACT ACAAGATATAGCTTCGATGTTTGTAGATAAGTGTGCTGGCTTGCCCATTGCCATTGCATG CATAGGCCGCTTATTATCCTGCAAACACCCGATATACTCTGAATGGGAACATGTGTACAA GGACTTAGAGCTTCAGCTCACCAACAATGTGATCCTTGATGTTGATATTGTTCTGAAAGT CAGCTTGGAGGATCTTCAACGTAATTTGAAGAACTGTTTTTTGCACTGCACAATATTTCC AGAAAGTTATGCATTCAACAGAAAAAGATTAATCAGACATTGGATAGCAGCTGGATACAT TCAAGAGGTAGGTAGCAAAACAGTAGAGGAAGTGGCAGAGGGCTACTTAAATGAACTTGT AAACAGAAGCCTGTTACAGGTAGTTGAGCGCAATCTATCTGGTCGAGTTCGCAGGTGCCG AATGCATGACATAATCCGTTTACTTGCCCTCAGAAAATCGAAGGAGGAATTTTTTTGTCA AGTTTACAAGGGCTCTGAGGCATGTTCAATCGAGAATACACGTCGTTTATCAATCCAAAA TGTAAGTATTCAACACCTTTCTGGATCAAGTGCACCATGTCTCCGATCCCTCCATGTTTT CAGTATTTATCGGAGAATTGATTCGCTGGAGGCTTTCCTCAAATCATTCAAGTTTCTGTC AACGTTGGATCTTCAAGGTATTTCAATCAAGAGGCTACCTAAGATTGTTTTTGACTTGTT TAATCTACGGTTCTTGGGTCTTCGCAAAACATATATCGAGTATCTCCCAAAAGAACTGAG TAGGTTACAGAATTTGGAAGTCCTGGATGCTTATGATTCTAAGCTATTGATTCTTCCAGT GGAAGTGGCCACACTTTGGAAACTGAAATATCTATATGTGGTAAGAGTTCCAGAGGGATC TTATGATAGAGTTCTTGCTTTTGACGGCCTCCAAGTGCCTATGGGTATCTGTAATTTGAT TGACTTGCTGGCCCTGCAACTTATCGAAGCTAGCACTGAGGTTCTGCGTCATATTGGATG TTTAACCAAGTTAAGAACCTTTGCAATCGGTAAAGTTAGAAATGAACACTGTGCAGATTT GTGCGACGCAATCATGAGAATGACTTGTCTTGTTCATATTACAATCATTTCAGCTGATGA GAAAGAAGTGCTACAGTTAGAAACACTTTGTTTACCTTCTACTATTGCAAAGATTGATCT AGGGGGCAGGCTAAGCAAGGAATCCATGTCACAGTTGATCTCAACCAGTTCAAACCTCGT TAACCTTACTGAATTAAACTTGTGCTTCTCCAAACTCAATGAAGACTCTTTTGCTTGCAT CTTGAATTTACACAACTTAGTTGAGCTTTATCTTTCAAAGGCTTATGACGGAAAGGAACT AATCTTCCATGCAACATCATTTCCGAAACTCAAATTACTAGCAGTATGGGATGCTCCTTA TCTCAGAAAAGTTGCAATCCAACAAGGTGCGCTACAAAGTCTTGTTAGGCTATGGCTAGC TGATTGTCCAGAATTAAGGGATGTTCCTGATGGCATCGAGCATCTGAGAACCCTTGAGCA TCTGAGAATTAAGGGAAGTTCAGATGAGCTCTGGAGGAAGCTTGAGATAAAAGGAAAATC GAACAAACGCAATGAAGATAGAATGAAGATCAGCCATGTCAAATGGGTCGAAATTGTTTA GGAGAAATGATCAAGAAAAATGTGGTGAACTAGACAAAACAAACAGGGCTGGCTGGAAAC AGTCCGGAGTACCGGAATTCAGTTAGCCCATATAGGCGTTTTTTCAGATACTTGTGACCG AGCTTTGAGCCACGCTTGGGATGGCACGCATGTTGGGTTAACTGGTCAATCTTTTGCATG TAACTGCCCACGTTCTGCGCTGATAAAAGGAAGAGAAAAAAAGGCAGAAAAGCTGCTGAA GTTGGCAGCACAAAATCCTGTTTTGCTCTGTTCTCGTTTCTTCAGTTTTACTGATCACAT ACGAAAATATTCAGAGTGTGAGCGAGTTCCAGAGGACGATCTCGGTTGATCATTGACAGA GAAAACATTATAGGTACACAGTACATATGTTCTGTATGCACGCATCAGCGTGATTGTTAA AAAAACATATCGATGATGACTTAGTTATTCCAGTAGTAAAGCGTGGGGAATCACCTAGTT GGTTTGATGGCTACAACCTTCATTGGGTGTGAAACTTGCTTCTTGAAGACTACAAGGTTG CAAAAGATTATATTGAAGACATTCAGGATATATGTGATGATTTTGAGGATGTTAACTCAA CTTAGCAGCAAATAAAGGCATGAACTTTTATGACTTCTTCGTCTTCACAACACGTTTTGC TTTAGCCAATATAGTTGAGCTTTACCATATTCAAAATCCAAAAGGCCCTCGGTTCAACAG AAACCACAAACCACTTTGTGTATAACCTCATGTCAATCCGTAATGTTCCATGAAGAGTGA TATCTACAGAAGCTTTCACTGCCGAGAATATTTGTAACATCTGAGAACAAAACCAGAGTG CTTTCTCCGATATCATAAAAATATTGGAAGAAGAGAGTTTCAGAAGGTTATTGGTGGCGA TGTCAAAGGCACATAGACACAGGACAAAGTGATTGACTCAAAATGAAGGATTCAAGTCAG AAGGGTTGTTTGTCAGTGACCTGCTTGAAATCTGACTGTAATGTTGTTGGTGACATTACT TCTTTCAAGCGTGAGATTCATGGACCTGTGGATTTGGTAATACTAATTGATAGTGCTCTC TCTGATGGATAGTTATAAGCTTACCTGGCACTGTAAACTTGTGCTTGCACCATTGCATAA CCTATTTCTTTAGGAATCCTGGATACTTGACCAGTTGACCACTGTTGAATGCTCCCATCC TCTGCATTCTGGAAGGATAGCTAAGCATGACATTCCCATTACCATCTTGTGATTCTCAAA TCTGGTATTGCAACCTTTATCTTTTAAAATCATTTCACAGTGTGAAGGATGGGCAAGAGT ACTGTACCATCTGACAGTAATTATGTTGTGAAAATTTCTCATGAAGAACTAGTTGGAAAG TAAGGAGCTAATTGTTGGTCAGTGACTTGCTGTCTTGGATATGTATTTCAAGGTGAATCC ACTGAAGGTGACACATTGACATACTGCTAATACTTTCAGAAAATGACCTCAAATGTTTCA CCATAGAAGATAGAAAATACTATGTTCCTTCTTTATGTTGTTTTAGATGCGTACAGTAAA ACATCAAAGTCTCACTAACATTTTTGTATTGGAGACCGTGTCAACGTCCTAAGCGACATA TAAGAAAAAATGATGTTGTTTTTCTTTTTCTTCCATGGATTATACTGATTTTGTTTTAGT TTGCTCTTTTCTTTACCTTTTGTTGTGCTCCCAGCAACCAAATGGAAGTTCTTGATGATG CAGCATGAAGAGTGTCTGCATACCAATAAATGCTCTCAGCTGCTGTTGTTATGTTAGGCT GCTAGCAAAAATGTATTGGGTAAAACATCGATAACTTCTTTGCTATTCAATAAACATGCA GCTTATAGCC