Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0546800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:20317878:20319355:-1 gene:Os01g0546800 gene_biotype:protein_coding transcript_biotype:protein_coding description:AmbAllergen domain containing protein. (Os01t0546800-01)
Sequence	ATGGGCGCCTCCTGCTCCTCCCCCTTCCCCCCTCCTCCTTCACCTGCCGAATCCAACGCC CCCTCCGCCTCCGCGATGCACCACCCGCCTCACCCCGCGGCCGGAGGAGGAGGACCCGTC ATGCCGTACGCCGACGCCGACCGCACCCTCCGCGCGCTGGCCGGCGCGGCGGAGGGCTTC GGCCGCCGCGCCATCGGCGGGCTCCACGGCCCGCTCTACCGCGTCACCTCCCTCGACGAC GACGGCCACGGCACCCTCCGCCAGGCGTGCCGCGCCCACGGCCCGCTCTGGATCGTCTTC GACGTCTCCGGCGACATCCACCTCCGCACCTACCTCCGCGTCACCTCCCACAAGACCATC GACGGGCGCGGCCAGCGCGTGCGCCTCCTGGGCAAGGGGCTCCAGCTCAAGGAGTGCCGC CACGTGATCGTCTGCAACCTCCAGATCGAGGGCGGGCGCGGCCACGACGTGGACGCCATC CAGATCAAGCCCTCCTCCGCCGACATCTGGATCGACCGCTGCAGCCTCGCCGACTGCGAC GACGGCCTCGTGGACATCACCCGCGGGAGCACCGACGTCACCGTCTCCCGGTGCCGCTTC TCCCGCCACGACAAGACCATGCTGGTGGGCGCCGACCCGTCCCACACCGGCGACCGCGGC ATCCGCGTCACCGTCCACCACTGCTTCTTCGACGGCACGCGGCAGCGCCACCCGCGGGTG CGGTTCGGGAGGGCGCACCTGTACAACAACTACACGAGGGGGTGGGGCATCTACGCGGTG GCCGCCGGGGTGGAGGCGCAGGTGGCGTCGCAGTGCAACGTGTACGAGGCCGGGGCGGAG AGGAAGGCGGTGTTCAGGTACGTGCCGGAGAGGGCGGCGGACCGGGAGGAGGCGGAGGCC GGGTGGGTGAGGTCGGAGGGGGACGCCTTCCTCAACGGGGCGCGGCCGTGCCTGGTGGAC GGCGGCGACGCGGCGGTGTTCAGGCCGGAGGAGTACTACGAGAGGTGGACCATGGAGGCG GCGTCGCCGGCGCTCAAGGAGGTGGTGCAGCTGTGCGCCGGGTGGCAGCCCGTGCCGAGG CCACCGGGCGAGTGA

Peptide Sequence

PEP ID	Os01t0546800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:20317878:20319355:-1 gene:Os01g0546800 transcript:Os01t0546800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AmbAllergen domain containing protein. (Os01t0546800-01)
Sequence	MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGGGGPVMPYADADRTLRALAGAAEGF GRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIVFDVSGDIHLRTYLRVTSHKTI DGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDAIQIKPSSADIWIDRCSLADCD DGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGDRGIRVTVHHCFFDGTRQRHPRV RFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYEAGAERKAVFRYVPERAADREEAEA GWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYERWTMEAASPALKEVVQLCAGWQPVPR PPGE

Transcript Sequence

Transcript ID	Os01t0546800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20317878:20319355:-1 gene:Os01g0546800 gene_biotype:protein_coding transcript_biotype:protein_coding description:AmbAllergen domain containing protein. (Os01t0546800-01)
Sequence	CTCCGCCACGCCGCACGTCTTCCCTTCGACTCCGCTTCTCCACCGACGCCACCACTGTCC TTCTCGCTTGCCGTGCCTCATCACCGCCGCACCGCTTCTCTCCGTTTGGTCAGATCTCAG ATCCAAATTTGAGCTAGTACTAACATTTTTGTGTCGCGTTGGTTTAGTTTTAATCCGATC CGATCCGCACCGCACGGCACGGCGGCGCGGCCATCTAGCGCCGCCATGGGCGCCTCCTGC TCCTCCCCCTTCCCCCCTCCTCCTTCACCTGCCGAATCCAACGCCCCCTCCGCCTCCGCG ATGCACCACCCGCCTCACCCCGCGGCCGGAGGAGGAGGACCCGTCATGCCGTACGCCGAC GCCGACCGCACCCTCCGCGCGCTGGCCGGCGCGGCGGAGGGCTTCGGCCGCCGCGCCATC GGCGGGCTCCACGGCCCGCTCTACCGCGTCACCTCCCTCGACGACGACGGCCACGGCACC CTCCGCCAGGCGTGCCGCGCCCACGGCCCGCTCTGGATCGTCTTCGACGTCTCCGGCGAC ATCCACCTCCGCACCTACCTCCGCGTCACCTCCCACAAGACCATCGACGGGCGCGGCCAG CGCGTGCGCCTCCTGGGCAAGGGGCTCCAGCTCAAGGAGTGCCGCCACGTGATCGTCTGC AACCTCCAGATCGAGGGCGGGCGCGGCCACGACGTGGACGCCATCCAGATCAAGCCCTCC TCCGCCGACATCTGGATCGACCGCTGCAGCCTCGCCGACTGCGACGACGGCCTCGTGGAC ATCACCCGCGGGAGCACCGACGTCACCGTCTCCCGGTGCCGCTTCTCCCGCCACGACAAG ACCATGCTGGTGGGCGCCGACCCGTCCCACACCGGCGACCGCGGCATCCGCGTCACCGTC CACCACTGCTTCTTCGACGGCACGCGGCAGCGCCACCCGCGGGTGCGGTTCGGGAGGGCG CACCTGTACAACAACTACACGAGGGGGTGGGGCATCTACGCGGTGGCCGCCGGGGTGGAG GCGCAGGTGGCGTCGCAGTGCAACGTGTACGAGGCCGGGGCGGAGAGGAAGGCGGTGTTC AGGTACGTGCCGGAGAGGGCGGCGGACCGGGAGGAGGCGGAGGCCGGGTGGGTGAGGTCG GAGGGGGACGCCTTCCTCAACGGGGCGCGGCCGTGCCTGGTGGACGGCGGCGACGCGGCG GTGTTCAGGCCGGAGGAGTACTACGAGAGGTGGACCATGGAGGCGGCGTCGCCGGCGCTC AAGGAGGTGGTGCAGCTGTGCGCCGGGTGGCAGCCCGTGCCGAGGCCACCGGGCGAGTGA TCCATCCATCCATGTTACTAGTGTATATCAAAAAGAAATATTCATGTATTATCCATTTAG TGTGTCAGTACATCATTACCAAGTAATAATCGTGTAATAATCATGCACGTGTGTAATCCT CATAAAATAAGTTTAAGCAATGAATTTAACCCACAATC