Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0543100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:20061961:20066455:1 gene:Os01g0543100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 17 description:Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a). (Os01t0543100-01)
Sequence	ATGAGTGCAGCAATGGCTGCCTTTGCCTTCCTACTAGTCATCGCCATCGTCTTCCCCCTC GCATCCGCATTCCCTTCCCCTCCTGTTTCATGGGGCCAACAGCAGCTAGACCCTCACTTC TACGACCACTCGTGCCCACAAGCACAGCAAATCGTGGCATCTATCGTCGGGAAAGCGCAT TACCAGGACCCCCGCATGGCCGCATCCCTCCTCCGTCTCCACTTCCACGACTGCTTTGTC AAGGGCTGCGACGCGTCGATCCTACTAGACAGCAGTGCGACGATCATGAGCGAGAAGCGG TCGAACCCTAACCGGGACTCTGCGAGGGGGTTCGAGGTGATCGACGAAATCAAGGCGGCG TTGGAGGCCGCTTGCCCACACACCGTCTCTTGCGCTGACATCCTTGCCCTCGCCGCGCGT GACTCCACCGTCATGACGGGAGGCCCCGGGTGGATAGTGCCGCTGGGGAGGAGGGACTCG CGTGGGGCGAGCGTGCAGGGCTCCAACAACGACATCCCGGCTCCCAACAACACCCTCCCC ACCATCATCACCAAGTTCAAGCTCCAGGGCCTCGACATCGTCGACCTCGTCGCCCTCCTC GGTAGCCACACCATCGGCGACTCCCGGTGCACGAGCTTCCGGCAGCGGCTGTACAACCAG ACGGGGAACGGCCTGCCGGACTTCACGCTGGACGCGTCGTACGCGGCGGCGCTGCGGCCG CGGTGCCCGCGCTCCGGCGGCGACCAGAACCTCTTCTTCCTCGACCCCGTCACCCCCTTC AGGTTCGACAACCAGTACTACAAGAACCTGCTCGCCCACCGCGGCCTCCTCAGCTCCGAC GAGGTGCTCCTCACCGGCGGCAACCCGGCCACGGCGGAGCTCGTCGAGCTCTACGCCGCC GATCAGGACATCTTCTTCGCCCACTTCGCGCGGTCCATGGTCAAGATGGGCAACATCTCG CCGCTCACCGGCGGCAACGGCGAGGTCAGGACCAACTGCAGGAGGGTCAACCACAACTAC TGA

Peptide Sequence

PEP ID	Os01t0543100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:20061961:20066455:1 gene:Os01g0543100 transcript:Os01t0543100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 17 description:Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a). (Os01t0543100-01)
Sequence	MSAAMAAFAFLLVIAIVFPLASAFPSPPVSWGQQQLDPHFYDHSCPQAQQIVASIVGKAH YQDPRMAASLLRLHFHDCFVKGCDASILLDSSATIMSEKRSNPNRDSARGFEVIDEIKAA LEAACPHTVSCADILALAARDSTVMTGGPGWIVPLGRRDSRGASVQGSNNDIPAPNNTLP TIITKFKLQGLDIVDLVALLGSHTIGDSRCTSFRQRLYNQTGNGLPDFTLDASYAAALRP RCPRSGGDQNLFFLDPVTPFRFDNQYYKNLLAHRGLLSSDEVLLTGGNPATAELVELYAA DQDIFFAHFARSMVKMGNISPLTGGNGEVRTNCRRVNHNY

Transcript Sequence

Transcript ID	Os01t0543100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:20061961:20066455:1 gene:Os01g0543100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:class III peroxidase 17 description:Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a). (Os01t0543100-01)
Sequence	ACCCATCATCACTACTGCACCAAGCTAGTCTCAAGTGTTCAATTAGCTAGCTCTCTTTTG CTTAGCCATGAGTGCAGCAATGGCTGCCTTTGCCTTCCTACTAGTCATCGCCATCGTCTT CCCCCTCGCATCCGCATTCCCTTCCCCTCCTGTTTCATGGGGCCAACAGCAGCTAGACCC TCACTTCTACGACCACTCGTGCCCACAAGCACAGCAAATCGTGGCATCTATCGTCGGGAA AGCGCATTACCAGGACCCCCGCATGGCCGCATCCCTCCTCCGTCTCCACTTCCACGACTG CTTTGTCAAGGGCTGCGACGCGTCGATCCTACTAGACAGCAGTGCGACGATCATGAGCGA GAAGCGGTCGAACCCTAACCGGGACTCTGCGAGGGGGTTCGAGGTGATCGACGAAATCAA GGCGGCGTTGGAGGCCGCTTGCCCACACACCGTCTCTTGCGCTGACATCCTTGCCCTCGC CGCGCGTGACTCCACCGTCATGACGGGAGGCCCCGGGTGGATAGTGCCGCTGGGGAGGAG GGACTCGCGTGGGGCGAGCGTGCAGGGCTCCAACAACGACATCCCGGCTCCCAACAACAC CCTCCCCACCATCATCACCAAGTTCAAGCTCCAGGGCCTCGACATCGTCGACCTCGTCGC CCTCCTCGGTAGCCACACCATCGGCGACTCCCGGTGCACGAGCTTCCGGCAGCGGCTGTA CAACCAGACGGGGAACGGCCTGCCGGACTTCACGCTGGACGCGTCGTACGCGGCGGCGCT GCGGCCGCGGTGCCCGCGCTCCGGCGGCGACCAGAACCTCTTCTTCCTCGACCCCGTCAC CCCCTTCAGGTTCGACAACCAGTACTACAAGAACCTGCTCGCCCACCGCGGCCTCCTCAG CTCCGACGAGGTGCTCCTCACCGGCGGCAACCCGGCCACGGCGGAGCTCGTCGAGCTCTA CGCCGCCGATCAGGACATCTTCTTCGCCCACTTCGCGCGGTCCATGGTCAAGATGGGCAA CATCTCGCCGCTCACCGGCGGCAACGGCGAGGTCAGGACCAACTGCAGGAGGGTCAACCA CAACTACTGATAGATCGATCGATACCCATCATCGTCTATCATTCGTCGTCGATCTGCTGC TTTTGGTTAATAATTAATTTGGTCTAGATGGTTCATCTTTTGGTCGGTTATATTATTATT AGTTGTCGATTAAGTAAAACACTGTTTTGTCGATCGAGATGTGAGATTTGTTGGTTGTGT TTAATTGTGTTATTTTGTTTCTTGAATTGTTTGTTAGCCTCTTAGAGGAAATTTGATACG CTTGGTGTATCATGCATGCTGTTATTAGTTGGTTCTTGTTAATAAAATGAGTCATGTTTG TGGCTGATCTC