Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0541900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:19962944:19970079:-1 gene:Os01g0541900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C04, protein phosphatase 2C 04, protein phosphatase 2C4, protein phosphatase 2C 4, protein phosphatase 8 description:Protein kinase, core domain containing protein. (Os01t0541900-01)
Sequence	ATGGGGGTGGAGGTGCCGCCGGAGGAGTCCAACCGGTGCGTGCGCGGGTGCTGCCGGAGC GCCGCCATCCCGCTCCACCTCCCGCCCTCCTCCTTCTCCCTCCTCTCCCCCATCGCCAAA GGGTCGGAGAGCACGGTGTACGAGGCGCGGCTGGGCGGCGAGCGCGTCGCGGCCAAGAAG CCCGTGCTGTCCACCTCCGACGACCTCGACAAGTTCCACTACCAGCTGCAGCTGCTCTGG TGGGTACTCCCCATTGAACTGGATCACCCAGGGTTGGCGAGACTGGTCGCAGCACATGCA CGTCCTCCGAATTACTTGATGTTCTTTGATTTCTTTGAACCTCCAAACCTTGCGGACAAG ATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTA GCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCA AACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCTTAGCCATGTAC CAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCAAGCCTACTGGT GGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAGAAATTTTGAGA AAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTATCAATGAGCTA CTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCACACACCGTTCTT GAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGCCCA GCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTATCCAGCGATGC TGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAGAGTTAAAAATA ATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAAACAAGAGTCAA AATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGAACCAAGGGGAG TTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTGATATTTTCGAT CAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACATGTGGTCGAAGA GAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAAAGGATCTGCAT GCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCTCAGTTCGAGCA GTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATGCCCTTACAGAA GCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACCAGAAGTCAAAA AGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCACTGATAGTGAGA AACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACCGTGCTGGTGAA CCATTTCCTATGACCAGGGATCATGTTGCTAGTTGTCCAAAGGAAAGAGAACGGATTGTA AAGGAAGGAACTGAAGTCAAATGGCAAATAGATACATGGCGTGTTGGTGCAGCTGCTCTT CAGGTCACACGGTCCATTGGCGATGATGATCTTAAGCCAGCAGTCACAGCACAACCTGAG GTTATAGAAACCATTTTATCACCTGATGATGAGTTCCTGGTGATGGCAAGTGATGGATTG TGGGACGTGATGAGCAACGAGGATGTCCTGTCCATCATCAAGGACACAGTAAAAGAGCCT GGAATGTGCTCCAAGCGGCTGGCCACGGAGGCGGCAGCGCGTGGCAGCAAGGACAACATC ACTGTCATCGTTGTGTTCCTTCGCCCCGTCTCCACTGCTGAGCGAATATACTAA

Peptide Sequence

PEP ID	Os01t0541900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:19962944:19970079:-1 gene:Os01g0541900 transcript:Os01t0541900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C04, protein phosphatase 2C 04, protein phosphatase 2C4, protein phosphatase 2C 4, protein phosphatase 8 description:Protein kinase, core domain containing protein. (Os01t0541900-01)
Sequence	MGVEVPPEESNRCVRGCCRSAAIPLHLPPSSFSLLSPIAKGSESTVYEARLGGERVAAKK PVLSTSDDLDKFHYQLQLLWWVLPIELDHPGLARLVAAHARPPNYLMFFDFFEPPNLADK IHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPANILIDKDFHPHLADFGLAMY QKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINEL LTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRC WDSDPQQRPSFKDITEELKIIEKHIAVNSCSLASPANKSQNGNTEVHHYQEALSWLNQGE LFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLH AFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSK RITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIV KEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGL WDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVVFLRPVSTAERIY

Transcript Sequence

Transcript ID	Os01t0541900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:19962944:19970079:-1 gene:Os01g0541900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C04, protein phosphatase 2C 04, protein phosphatase 2C4, protein phosphatase 2C 4, protein phosphatase 8 description:Protein kinase, core domain containing protein. (Os01t0541900-01)
Sequence	GCCGCCCCTGCCCCGTCCACAGGCACAGCCCATACGATTTCCCTTCTGAATCCGCCTGAT CGCCTCCTCCGCCACCGCCGTGTTCGATTCGTCTTCCCGCGGCGGCGGCGGCGGCGGCGG CGGCGAGGAAGATGGGGGTGGAGGTGCCGCCGGAGGAGTCCAACCGGTGCGTGCGCGGGT GCTGCCGGAGCGCCGCCATCCCGCTCCACCTCCCGCCCTCCTCCTTCTCCCTCCTCTCCC CCATCGCCAAAGGGTCGGAGAGCACGGTGTACGAGGCGCGGCTGGGCGGCGAGCGCGTCG CGGCCAAGAAGCCCGTGCTGTCCACCTCCGACGACCTCGACAAGTTCCACTACCAGCTGC AGCTGCTCTGGTGGGTACTCCCCATTGAACTGGATCACCCAGGGTTGGCGAGACTGGTCG CAGCACATGCACGTCCTCCGAATTACTTGATGTTCTTTGATTTCTTTGAACCTCCAAACC TTGCGGACAAGATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTG CCACTGATCTAGCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATA TAAAGCCTGCAAACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCT TAGCCATGTACCAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCA AGCCTACTGGTGGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAG AAATTTTGAGAAAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTA TCAATGAGCTACTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCAC ACACCGTTCTTGAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAG GATTGCGCCCAGCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTA TCCAGCGATGCTGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAG AGTTAAAAATAATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAA ACAAGAGTCAAAATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGA ACCAAGGGGAGTTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTG ATATTTTCGATCAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACAT GTGGTCGAAGAGAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAA AGGATCTGCATGCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCT CAGTTCGAGCAGTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATG CCCTTACAGAAGCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACC AGAAGTCAAAAAGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCAC TGATAGTGAGAAACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACC GTGCTGGTGAACCATTTCCTATGACCAGGGATCATGTTGCTAGTTGTCCAAAGGAAAGAG AACGGATTGTAAAGGAAGGAACTGAAGTCAAATGGCAAATAGATACATGGCGTGTTGGTG CAGCTGCTCTTCAGGTCACACGGTCCATTGGCGATGATGATCTTAAGCCAGCAGTCACAG CACAACCTGAGGTTATAGAAACCATTTTATCACCTGATGATGAGTTCCTGGTGATGGCAA GTGATGGATTGTGGGACGTGATGAGCAACGAGGATGTCCTGTCCATCATCAAGGACACAG TAAAAGAGCCTGGAATGTGCTCCAAGCGGCTGGCCACGGAGGCGGCAGCGCGTGGCAGCA AGGACAACATCACTGTCATCGTTGTGTTCCTTCGCCCCGTCTCCACTGCTGAGCGAATAT ACTAACCACAAAGCCTTGTTGGTAACTTCATCATTTGTCAGAATTTTTAGATACTATTAT CACCACTGTAAAGGAAAGAAGCCACCGATTCGTTCTTGTACACAAATTGGATTTGCTGAT TACCCTGTCTAGGGCAGAAAGATGATTAATCTTTCTGATAGGAGATATAGCATTCTTTCA TTGGTCAATGTTTATGCAACTCTGATTCATCTCATTTGTGCACCTTCCAGGCCAAAAGAA CAAAACATATTTATTCAATACTTATCTCAATAAAATTTTGTGGAATTGTCGATGGTCC