Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0534800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:19389923:19392838:1 gene:Os01g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-01);Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-02)
Sequence	ATGGATTTCGAGCTGCGCAAGGCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGCGTG CAGCGCGCCAAGGACAAGGCCGACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGCCGC CGCGACGCGCTCGAGGCGTCCCACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAGGAA GAGGCTCAGCAGAAGATGGAAGAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTGCAC ATGTTTGAAGCTCTTCGATATGATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCT TTTAAGGAATTGTCTGATGAAGGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCA AAGGTTAGAGACAGTGTTCCGGGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGT TGTGGTGTTCTTGAGTTCACTGCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGG AACAATCTGTTCCGGGGTGATAGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGT TTACCCAAAGGGACATATGCGAAGCTGAAGCCAGAAGGAGTGGGGTTCTCAGACCTTCCT AACCATAGGGCTGTCCTTGAAACGGCACTCCGCAATCATGCAACACTATCTGAAAATGAT TTTGTTGTGGTGAATTATGGGCAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCT GCATCAAGTGTTTCTGTCCTGGAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCA GTTTTGGACAACGTAGAGAATCAACATGTGCTTGTGCCACTTGAGACTGGAAAGGTTGAA TCTGGAGTTGTGGAAGAAGGAAAGTTTAGGTACTACAAATTTCTTGTTGATGAAGGTATG GGTGAGAAAGTAGCTTCTAGGCATGCAAATATTGAGGTTAAGATAGAGACATATACAAGT GGTGGTGACACTGATATTTATGTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGT CACGAATGGTCTTCTCATGAAATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCC AGTCTCTCCAGTGGTACCTACAGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATAC CAACTTTCTGTAGCTATTAAAGATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGT GCCTCATCTAGTGTTGATGTTGATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCC AACCGAACTTCACTACTTCATGAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCAT GATGGGTGTGGTGTTGTTCTTCGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAG TGTGGGCAAGCTTTCCAGCAGAGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCA CTACAATGCCCTTGTGGGGTGGTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCA ACCTGCCCTTTGCGCTTGATTGTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGA GAACCACTTGATGCTCGGGATCGGCTTCGCAACATGTGTGAGCACGAGAGTATCTGTGGA TCCAGGACTGCACCATGTGATTCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATT CATGTGATTGCTGTGCATCAGAAGAGCTAA

Peptide Sequence

PEP ID	Os01t0534800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:19389923:19392838:1 gene:Os01g0534800 transcript:Os01t0534800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-01);Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-02)
Sequence	MDFELRKAREKLEREQRERVQRAKDKADRERRAKAEAARRRDALEASHRERRLDAARAQE EAQQKMEEVMQLGKGISFLHMFEALRYDGPGDKIKLPPSSFKELSDEGALDKGPMYFRLS KVRDSVPGAPQDNDADEATCCGVLEFTAREGSAELTPHVWNNLFRGDSPDVPLIEVRYVS LPKGTYAKLKPEGVGFSDLPNHRAVLETALRNHATLSENDFVVVNYGQLQYKLKVLELKP ASSVSVLETDVEVDIEGPDSVLDNVENQHVLVPLETGKVESGVVEEGKFRYYKFLVDEGM GEKVASRHANIEVKIETYTSGGDTDIYVSRHPLVFPTQHRHEWSSHEMGSKVLILKPRDA SLSSGTYSIGVYGFKGTTKYQLSVAIKDVLNGQRIGEQASASSSVDVDSVVCKNCKRYIS NRTSLLHEAYCVRHNVVCMHDGCGVVLRKEEATDHVHCNKCGQAFQQREMEKHMKVFHEP LQCPCGVVLEKEDMVQHQSSTCPLRLIVCRFCGDTVQAGGEPLDARDRLRNMCEHESICG SRTAPCDSCGRSVMLKDMDIHVIAVHQKS

Transcript Sequence

Transcript ID	Os01t0534800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:19389923:19392838:1 gene:Os01g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-01);Similar to PRLI-interacting factor K (Fragment). (Os01t0534800-02)
Sequence	ATCGCCGACGACAACCAGAGCAGAGGAGAGGGGAGGGGAACCCAAGCAAGCAATCAGCGT GGAATCGGATCGGGTACGAGGAGGAGGAGGAGGAGGGGGATGGATTTCGAGCTGCGCAAG GCGCGGGAGAAGCTGGAGCGGGAGCAGCGGGAGCGCGTGCAGCGCGCCAAGGACAAGGCC GACCGCGAGCGCCGCGCCAAGGCCGAGGCCGCGCGCCGCCGCGACGCGCTCGAGGCGTCC CACCGCGAGCGCCGCCTCGACGCCGCCCGCGCGCAGGAAGAGGCTCAGCAGAAGATGGAA GAGGTGATGCAACTTGGAAAGGGGATTTCTTTCTTGCACATGTTTGAAGCTCTTCGATAT GATGGTCCTGGGGATAAGATCAAGTTGCCACCATCGTCTTTTAAGGAATTGTCTGATGAA GGAGCACTGGACAAAGGTCCCATGTACTTCAGGTTGTCAAAGGTTAGAGACAGTGTTCCG GGTGCCCCTCAGGATAATGATGCCGATGAGGCAACATGTTGTGGTGTTCTTGAGTTCACT GCAAGGGAAGGCTCCGCAGAACTCACTCCACATGTGTGGAACAATCTGTTCCGGGGTGAT AGCCCAGATGTTCCTCTGATTGAGGTTAGGTATGTCAGTTTACCCAAAGGGACATATGCG AAGCTGAAGCCAGAAGGAGTGGGGTTCTCAGACCTTCCTAACCATAGGGCTGTCCTTGAA ACGGCACTCCGCAATCATGCAACACTATCTGAAAATGATTTTGTTGTGGTGAATTATGGG CAGCTGCAATACAAGTTGAAGGTTCTTGAATTAAAACCTGCATCAAGTGTTTCTGTCCTG GAGACAGATGTGGAAGTTGACATTGAAGGACCAGATTCAGTTTTGGACAACGTAGAGAAT CAACATGTGCTTGTGCCACTTGAGACTGGAAAGGTTGAATCTGGAGTTGTGGAAGAAGGA AAGTTTAGGTACTACAAATTTCTTGTTGATGAAGGTATGGGTGAGAAAGTAGCTTCTAGG CATGCAAATATTGAGGTTAAGATAGAGACATATACAAGTGGTGGTGACACTGATATTTAT GTATCAAGGCATCCTTTAGTTTTCCCAACTCAGCACCGTCACGAATGGTCTTCTCATGAA ATGGGATCTAAGGTCCTCATACTGAAACCAAGGGATGCCAGTCTCTCCAGTGGTACCTAC AGTATTGGAGTTTATGGTTTCAAGGGAACCACTAAATACCAACTTTCTGTAGCTATTAAA GATGTTCTTAATGGCCAAAGGATTGGTGAGCAGGCTAGTGCCTCATCTAGTGTTGATGTT GATTCAGTGGTGTGCAAGAACTGCAAACGCTATATATCCAACCGAACTTCACTACTTCAT GAAGCATACTGTGTGAGACACAATGTTGTTTGCATGCATGATGGGTGTGGTGTTGTTCTT CGAAAGGAGGAAGCAACAGATCACGTGCATTGCAACAAGTGTGGGCAAGCTTTCCAGCAG AGAGAAATGGAGAAGCACATGAAAGTTTTCCATGAGCCACTACAATGCCCTTGTGGGGTG GTCCTTGAAAAGGAAGATATGGTTCAACACCAATCCTCAACCTGCCCTTTGCGCTTGATT GTGTGCCGATTTTGTGGTGACACTGTTCAAGCTGGTGGAGAACCACTTGATGCTCGGGAT CGGCTTCGCAACATGTGTGAGCACGAGAGTATCTGTGGATCCAGGACTGCACCATGTGAT TCTTGTGGACGGTCAGTCATGCTGAAGGACATGGACATTCATGTGATTGCTGTGCATCAG AAGAGCTAACTATTGTAAAGCATTGGCTCTGAGAAAGATGGCCTGTCCTTTATCCTGCTG GGCTTTAACCACCAAGGCCATGAAGTTTCAGCACTGCTGGACCAAATGTTATTTCCTTTT GTGTTACATATATCTTGTGTCATTGGTTAAATTGTAACACTGCGTATGGGAGCATGGAAC ACTGGGGCGGTGTATGGGAGTATGGAACACAGTGGCGGTGTCTCCTTATGTATACACAAA CCATCTATAATATTTGATTTGAGCTTTCTCATATTCAGGAGCTTTATTAG