Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0533400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:19295569:19302138:-1 gene:Os01g0533400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 5 description:Glycoside hydrolase, family 35 protein. (Os01t0533400-01)
Sequence	ATGATGGGACGGCGCGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCC GTGGCGGCCGATGCCGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATC GACGGCCAGCGCCGGATCATCCTCTCTGGTTCCATCCATTATCCCCGGAGCACTCCCGAG ATGTGGCCGGATCTGATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTAC ATCTTTTGGAACGGCCATGAGCCGCACCGCCGCCAGTACAATTTTGAGGGTAACTACGAT GTCGTCAGGTTCTTCAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGC CCGTACATCTGTGGCGAATGGAACTATGGAGGACTTCCAGCTTGGCTACGCGACATCCCT GGAATGCAGTTTAGGCTGCATAATGAGCCTTTTGAGAATGAGATGGAGACATTCACCACT CTTATAGTTAACAAGATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATC CTTGCTCAGATTGAGAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCT GCATCTGAATACATCCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCA TGGATCATGTGTCAACAAGACGACGATGTGCCGCACAATGTGGTCAATACCTGTAATGGA TTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAAC TGGACTGGCTGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATT GCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTAC CATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGAT TATGACGCGCCTTTGGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAG GAACTCCACTCCGTGCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGAC ACCAACTATGGCGATAACATCACAGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGC TTCATCAACAACAGATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCAC CTCCTGCCTGCATGGTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGC GCCAAGATTAAGACCCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAG CAGGAGAGCCTAAAATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAG AAGGGCAACTTTAGGAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGT GATTACCTGTGGTACAGAACAAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTAC GTGAACACGACTGGCCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGGAAAAAC CATTCTGCCGATGGAGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGC AAGAACTACATCTCTCTTCTGAGTGCAACCGTTGGCCTCAAGAACTATGGCCCTTCGTTC GAAAAGATGCCCACGGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACC GCAATTGATCTCTCCAACAGCTCCTGGTCTTATAAGGCTGGCTTGGCTAGTGAGTACAGG CAGATCCATCTTGACAAGCCAGGCTACAAATGGAATGGCAACAATGGCACCATCCCCATC AACAGGCCTTTTACTTGGTACAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTG GTGGTGGACCTGCTGGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGC CGCTACTGGCCGTCGTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGC GGCGCGTTCCAGGCGGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCG CAGCGCTACTACCACGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTC CTCTTCGAGGAGGCCGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGT GCCGTGTGCACCTCCGGCGAGGCCGGTGACGCCGTCACGCTGTCGTGCGGCGGCGGCCAC GCCGTGTCGAGCGTCGACGTGGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGGCTAC GAGGGCGGGTGCGAGTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAG GAGTCGTGCACGGTGGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTG CTCACCGTCCAGGCCACTTGCTGA

Peptide Sequence

PEP ID	Os01t0533400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:19295569:19302138:-1 gene:Os01g0533400 transcript:Os01t0533400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 5 description:Glycoside hydrolase, family 35 protein. (Os01t0533400-01)
Sequence	MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPE MWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIG PYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPII LAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNG FYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMY HGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFD TNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNS AKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQS DYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDG KNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKAGLASEYR QIHLDKPGYKWNGNNGTIPINRPFTWYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLG RYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLL LFEEAGGDPSGVALRTVVPGAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGY EGGCESKAAYEAFTAACVGKESCTVEITGAFAGAGCLSGVLTVQATC

Transcript Sequence

Transcript ID	Os01t0533400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:19295569:19302138:-1 gene:Os01g0533400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 5 description:Glycoside hydrolase, family 35 protein. (Os01t0533400-01)
Sequence	CTGCAATTCGATCGCTTGCATCTGCAAAGTTGCAACTCATCTCGTCTCCTCCTCTCCTCC CCTCCTCCCCTGTAGCCTAGCTAATTAACTTCAAATTAGCAGCAGTATGATGGGACGGCG CGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCCGTGGCGGCCGATGC CGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATCGACGGCCAGCGCCG GATCATCCTCTCTGGTTCCATCCATTATCCCCGGAGCACTCCCGAGATGTGGCCGGATCT GATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTACATCTTTTGGAACGG CCATGAGCCGCACCGCCGCCAGTACAATTTTGAGGGTAACTACGATGTCGTCAGGTTCTT CAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGCCCGTACATCTGTGG CGAATGGAACTATGGAGGACTTCCAGCTTGGCTACGCGACATCCCTGGAATGCAGTTTAG GCTGCATAATGAGCCTTTTGAGAATGAGATGGAGACATTCACCACTCTTATAGTTAACAA GATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATCCTTGCTCAGATTGA GAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCTGCATCTGAATACAT CCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCATGGATCATGTGTCA ACAAGACGACGATGTGCCGCACAATGTGGTCAATACCTGTAATGGATTCTATTGCCATGA CTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTT CAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGC GATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTACCATGGTGGAACCAA CTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTT GGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAGGAACTCCACTCCGT GCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGACACCAACTATGGCGA TAACATCACAGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGCTTCATCAACAACAG ATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCACCTCCTGCCTGCATG GTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGCGCCAAGATTAAGAC CCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAGCAGGAGAGCCTAAA ATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAGAAGGGCAACTTTAG GAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGTGATTACCTGTGGTA CAGAACAAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTACGTGAACACGACTGG CCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGGAAAAACCATTCTGCCGATGG AGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGCAAGAACTACATCTC TCTTCTGAGTGCAACCGTTGGCCTCAAGAACTATGGCCCTTCGTTCGAAAAGATGCCCAC GGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACCGCAATTGATCTCTC CAACAGCTCCTGGTCTTATAAGGCTGGCTTGGCTAGTGAGTACAGGCAGATCCATCTTGA CAAGCCAGGCTACAAATGGAATGGCAACAATGGCACCATCCCCATCAACAGGCCTTTTAC TTGGTACAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTGGTGGTGGACCTGCT GGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGCCGCTACTGGCCGTC GTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGCGGCGCGTTCCAGGC GGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCGCAGCGCTACTACCA CGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTCCTCTTCGAGGAGGC CGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGTGCCGTGTGCACCTC CGGCGAGGCCGGTGACGCCGTCACGCTGTCGTGCGGCGGCGGCCACGCCGTGTCGAGCGT CGACGTGGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGGCTACGAGGGCGGGTGCGA GTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAGGAGTCGTGCACGGT GGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTGCTCACCGTCCAGGC CACTTGCTGATTGATCTACATGCATATATATGGAGTGGCCATGTCTTTGATTAATTAGGT CTTTAATTAGTCGCTTAATTAGGATGGTTTGTTTATTGAGTTAAGCTGGTAGTCGCCCCT GGTGCATGTGTTAATTCGGGGGTAAAAAGTGAGTTTATTAATTAGGGTTCTCTGATCAAC TGTTGATTGCAGAGACGCAGAGTGTGATATATACTGGGACCAAATATTTCATCTATGAAG TACTTTTACGATCGAGTGGTTAAACATGTGTGTTAATGCCCTTG