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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0531500-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:19135897:19139875:1 gene:Os01g0531500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os01t0531500-01);Similar to protein usf. (Os01t0531500-02)
Sequence

ATGGCATCCTCCGCCGCGCCGTTCCACATGGTCCAGATCCAGCGCGACGACACGACTTTT
GATGCCTATGTTGTTGGAAAAGAGAATGCTCCTGGAATTGTTGTTTTGCAAGAGTGGTGG
GGGGTTGACTATGAGATCAAGAATCATGCTGTCCACATTTCCCAAATTGGTGAAGGATAC
AGAGCTCTCATTCCAGATTTGTATCGTGGTAAGGTTGCTCTTGATGTAGCGGAAGCTCAG
CATCTGATGGAAGGTCTAGACTGGCCGGGTGCGGTCAAGGATATTCAGGCTTCAGTTAAA
TGGCTCAAGGCAAATGGATCACCCAAGGTTGGTGTTACTGGATATTGCATGGGAGGCGCT
TTGTCAATTGCAAGTGGAGTTTCAGTCCCAGAGGTTGATGCTGTTGTGGCTTTCTATGGG
ACACCACCTTCTGAGCTTGCCGATGCTTCCAAGGCCCAGGCTCCCATCCAGGCTCATTTT
GGGGAGCTTGACAGTTTTGTTGGATTTGCAGATGTCACGGCAGCCAAGTCGCTGGAGGAG
AAGCTCAAGTCATCTGGCGTGCCACATGAAGTCCACATCTACCCTGGCTGCTCGCATGCT
TTTATGAACACATCACCTGAGGCCGTCAAGAGGAGGAAGGAGATGGGTCTGACTGATGAG
AACCAGGCAGCAATTGACCTGGCCTGGTCTCGCTTCTCGACTTGGATGGGTCGTTTCCTT
GGATCGGCGTGA

Peptide Sequence

PEP ID

Os01t0531500-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:19135897:19139875:1 gene:Os01g0531500 transcript:Os01t0531500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os01t0531500-01);Similar to protein usf. (Os01t0531500-02)
Sequence

MASSAAPFHMVQIQRDDTTFDAYVVGKENAPGIVVLQEWWGVDYEIKNHAVHISQIGEGY
RALIPDLYRGKVALDVAEAQHLMEGLDWPGAVKDIQASVKWLKANGSPKVGVTGYCMGGA
LSIASGVSVPEVDAVVAFYGTPPSELADASKAQAPIQAHFGELDSFVGFADVTAAKSLEE
KLKSSGVPHEVHIYPGCSHAFMNTSPEAVKRRKEMGLTDENQAAIDLAWSRFSTWMGRFL
GSA

Transcript Sequence

Transcript ID

Os01t0531500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:19135897:19139875:1 gene:Os01g0531500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os01t0531500-01);Similar to protein usf. (Os01t0531500-02)
Sequence

GCAACTGCTGCTACGCCGCGCCTTCTCCTCCTCCTTCCTCTCCTCCCCATTCCGCCGCCC
GCCACTCCACCCCGCCCGCTCCTTCGTTCCCCCCCGCGCCGCCATGGCATCCTCCGCCGC
GCCGTTCCACATGGTCCAGATCCAGCGCGACGACACGACTTTTGATGCCTATGTTGTTGG
AAAAGAGAATGCTCCTGGAATTGTTGTTTTGCAAGAGTGGTGGGGGGTTGACTATGAGAT
CAAGAATCATGCTGTCCACATTTCCCAAATTGGTGAAGGATACAGAGCTCTCATTCCAGA
TTTGTATCGTGGTAAGGTTGCTCTTGATGTAGCGGAAGCTCAGCATCTGATGGAAGGTCT
AGACTGGCCGGGTGCGGTCAAGGATATTCAGGCTTCAGTTAAATGGCTCAAGGCAAATGG
ATCACCCAAGGTTGGTGTTACTGGATATTGCATGGGAGGCGCTTTGTCAATTGCAAGTGG
AGTTTCAGTCCCAGAGGTTGATGCTGTTGTGGCTTTCTATGGGACACCACCTTCTGAGCT
TGCCGATGCTTCCAAGGCCCAGGCTCCCATCCAGGCTCATTTTGGGGAGCTTGACAGTTT
TGTTGGATTTGCAGATGTCACGGCAGCCAAGTCGCTGGAGGAGAAGCTCAAGTCATCTGG
CGTGCCACATGAAGTCCACATCTACCCTGGCTGCTCGCATGCTTTTATGAACACATCACC
TGAGGCCGTCAAGAGGAGGAAGGAGATGGGTCTGACTGATGAGAACCAGGCAGCAATTGA
CCTGGCCTGGTCTCGCTTCTCGACTTGGATGGGTCGTTTCCTTGGATCGGCGTGAGCCAT
TTACGCATATATGTTGTCAACCTGTCAGGTTGTATGAATAAAATCATTCAGGCCAGATGC
AGAGTAATTAAGTATACCCAAACCAAATAATTGTGCTGTGTTGGACTATGTGAACATGCC
ATGCTTTGGTTTGCGAATTATCTGTGGTTTTACTGTGCTTTCGAGATTGCATAT