Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0528800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:19009708:19014136:1 gene:Os01g0528800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cinnamyl alcohol dehydrogenase-like description:Similar to Cinnamyl alcohol dehydrogenase. (Os01t0528800-01)
Sequence

ATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCG
TCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGC
GCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGA
GCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCT
GCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAA
GATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCC
TGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTAC
AATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAG
ATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCT
TGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATT
GGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAAT
GGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGATGTTGCC
CTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCATGGTTGAA
AGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCT
CTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAA
AAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATC
GAGAGCTTGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAA

Peptide Sequence

PEP ID

Os01t0528800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:19009708:19014136:1 gene:Os01g0528800 transcript:Os01t0528800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cinnamyl alcohol dehydrogenase-like description:Similar to Cinnamyl alcohol dehydrogenase. (Os01t0528800-01)
Sequence

MSSESEAAPGTGKLVCVTGASGYIASWLVRLLLARGYTVRATIRDTSDPKKTLHLRALDG
ANERLHLFEANLLEEGSFDAAVNGCDCVFHTASPFYHNVKDPKAELLDPAVKGTLNVLGS
CKKASIRRVIVTSSMAAVAYNGKPRTPDVVVDETWFSVPEICEKHQQWYVLSKTLAEEAA
WKFSKDNGFEIVTVNPAMVIGPLLQPSLNTSAEAILKLINGSSSTYPNFSFGWINVKDVA
LAHILAYEVPSANGRYCMVERVAHYSELVQIIREMYPNIPLPDKCADDKPSVPIYQVSKE
KIKSLGLELTPLHTSIKETIESLKEKGFVTFDSSNL

Transcript Sequence

Transcript ID

Os01t0528800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:19009708:19014136:1 gene:Os01g0528800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cinnamyl alcohol dehydrogenase-like description:Similar to Cinnamyl alcohol dehydrogenase. (Os01t0528800-01)
Sequence

ACACACCATTATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCC
GGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCG
AGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCT
CCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGT
ACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCA
TCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACG
AAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCA
ATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCTA
AGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGA
AAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGA
AACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTG
AAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGT
TTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCC
TGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCAT
CCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGATGTTGCCCTGGCAC
ATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCATGGTTGAAAGAGTTG
CGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAG
ACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAA
AAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCT
TGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAGAGCTCCAT
ACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGTAACTTTGCATGAACTACTACA
GATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGA
TT