Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0527900-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:18972507:18977135:-1 gene:Os01g0527900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0527900-00)
Sequence	ATGGGTCGCTCGAAACGGGAGGTTGCGCTGCCGCCGCCGCCATCTCCGTCGCAAGCCTCG CCGGGATCCTTCGCATCTGGCATGATGTTACCGGGATCCTTAGGCAGTGGTGCCTGGCAA GGTCCGGCGCCACTGCAGCCGCCGCACCCTTTGCTCTACGCGTATGGCGCCGCTGCTTCT GCTTTTCCCATGGCCCAAATGAAGCAAGGATTGGATCGTAGTGCCATTGATTTGTCAGAT CTGCAAGAACGTGGTATGGACTTTCATCCGCCTGGTGGTTTCTTAAGTTACTTTCAGGAT CCATCAATTTTACAGAATCATCGACCTTTTGTGCCTCCAAATTATTATCCTGCTGAACAA GTAGCACCATGTTCAAAATTACATCCAGGAGCACAACAACCTGTCAACATTGATAGTGGT GATGAAGAAGCCCCCAATGTTAGGACTGAGAAGCGGTTGACATGGTCAACAGAGGAGGAC ATAAGACTAGTGAGTGCTTGGCTAAACAACTCGAATGATTCGATCAGTGGTAATTTTAAG AAAAATGATTGTTATTGGGGAGATGTTACTGCTGAGTATAATAGCACCACTCCCAAAAAC AGGACAAGGCAAGAAAAACAAATCAAAGACCGTTTTCATAAAATTAAGAAAAATGTTGGC CGTTTCTGTTGTGTTTATAAAGAGGTTAAATCCATATATGTTAATGGACAAAATGATATG CAACTCAGGGAAAAGGCTGAAGCAGCATATCAAGCAGATTACAAGGAAGGCCCATTTTCA TTTCTGCATTGTTGGAACATTCTTCGTGACCAACCAAAGTGGCATGCTTACTTGGAGGAA CTTGAGAAGCCAAACAAACCAAAGATGGATGATGAAGTGGAAGTGATGGAGCAAATGTCC ACTCCTAACAGTCCTGAAGATATTAAACGTCCAGTAGGAACAAAAACTGCTAAGGCGCAA CGTAATGGTAAAGGCAAACGCAAAAGGAAGGCAAAGGTTTATCTATCAGATACTGATGAT GAAATTGACAAGCTTAAAGAAGTTCAGGAGATGGCAAATAAAGGTCGTGATGAACTACTA GAGACTCAGAGGCATGTTGCTAGTGATAACCTTGAATCAAAAAAGTTAGCGCACCTTGCA GCCATGGAGCACAAGGAGGCTGTTATGTTGGAAACATATCGGTCTCTCATGTTACAAGAT ACAAAAGATATGCCTGATGATGTTAGATCCGAGCATTTGATGGCATTGAAGTGTATGAGG GAGAAGTTGTTTCCGTAA

Peptide Sequence

PEP ID	Os01t0527900-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:18972507:18977135:-1 gene:Os01g0527900 transcript:Os01t0527900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0527900-00)
Sequence	MGRSKREVALPPPPSPSQASPGSFASGMMLPGSLGSGAWQGPAPLQPPHPLLYAYGAAAS AFPMAQMKQGLDRSAIDLSDLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNYYPAEQ VAPCSKLHPGAQQPVNIDSGDEEAPNVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGNFK KNDCYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVKSIYVNGQNDM QLREKAEAAYQADYKEGPFSFLHCWNILRDQPKWHAYLEELEKPNKPKMDDEVEVMEQMS TPNSPEDIKRPVGTKTAKAQRNGKGKRKRKAKVYLSDTDDEIDKLKEVQEMANKGRDELL ETQRHVASDNLESKKLAHLAAMEHKEAVMLETYRSLMLQDTKDMPDDVRSEHLMALKCMR EKLFP

Transcript Sequence

Transcript ID	Os01t0527900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:18972507:18977135:-1 gene:Os01g0527900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0527900-00)
Sequence	GATGCCGTCGACAAATAACGCGCTTTCTTGGCCTTTTGCATCCCATGCTCCATGGCTCAT TCCTTCTCTGTATATTTGGCGGTAAATCCCCATCCGCCGGAAAAAAAATCGCACTTCACG CGCCAAATTAGTTAGTCGAAGCGTCAAATTCCTACTGAAATACCCCATCCAGTTAGTAAT CCCTCAACTCAATCTGCTGAAACAATGGGTCGCTCGAAACGGGAGGTTGCGCTGCCGCCG CCGCCATCTCCGTCGCAAGCCTCGCCGGGATCCTTCGCATCTGGCATGATGTTACCGGGA TCCTTAGGCAGTGGTGCCTGGCAAGGTCCGGCGCCACTGCAGCCGCCGCACCCTTTGCTC TACGCGTATGGCGCCGCTGCTTCTGCTTTTCCCATGGCCCAAATGAAGCAAGGATTGGAT CGTAGTGCCATTGATTTGTCAGATCTGCAAGAACGTGGTATGGACTTTCATCCGCCTGGT GGTTTCTTAAGTTACTTTCAGGATCCATCAATTTTACAGAATCATCGACCTTTTGTGCCT CCAAATTATTATCCTGCTGAACAAGTAGCACCATGTTCAAAATTACATCCAGGAGCACAA CAACCTGTCAACATTGATAGTGGTGATGAAGAAGCCCCCAATGTTAGGACTGAGAAGCGG TTGACATGGTCAACAGAGGAGGACATAAGACTAGTGAGTGCTTGGCTAAACAACTCGAAT GATTCGATCAGTGGTAATTTTAAGAAAAATGATTGTTATTGGGGAGATGTTACTGCTGAG TATAATAGCACCACTCCCAAAAACAGGACAAGGCAAGAAAAACAAATCAAAGACCGTTTT CATAAAATTAAGAAAAATGTTGGCCGTTTCTGTTGTGTTTATAAAGAGGTTAAATCCATA TATGTTAATGGACAAAATGATATGCAACTCAGGGAAAAGGCTGAAGCAGCATATCAAGCA GATTACAAGGAAGGCCCATTTTCATTTCTGCATTGTTGGAACATTCTTCGTGACCAACCA AAGTGGCATGCTTACTTGGAGGAACTTGAGAAGCCAAACAAACCAAAGATGGATGATGAA GTGGAAGTGATGGAGCAAATGTCCACTCCTAACAGTCCTGAAGATATTAAACGTCCAGTA GGAACAAAAACTGCTAAGGCGCAACGTAATGGTAAAGGCAAACGCAAAAGGAAGGCAAAG GTTTATCTATCAGATACTGATGATGAAATTGACAAGCTTAAAGAAGTTCAGGAGATGGCA AATAAAGGTCGTGATGAACTACTAGAGACTCAGAGGCATGTTGCTAGTGATAACCTTGAA TCAAAAAAGTTAGCGCACCTTGCAGCCATGGAGCACAAGGAGGCTGTTATGTTGGAAACA TATCGGTCTCTCATGTTACAAGATACAAAAGATATGCCTGATGATGTTAGATCCGAGCAT TTGATGGCATTGAAGTGTATGAGGGAGAAGTTGTTTCCGTAATACTAAGGGACAATGGAA AACTTTGGTGCTAGCTTTTTGGTGCTTTCTGCTATGGTTTTGGGAGGTAGTGAAGGTGCT CAATTTGGCAGGTTGGCAGCTTGTTTTGGTTCTGCTTGAGAAAGATAATCTAGTTATAAA GTAATTTTTAGTAATTCGCTGGTGTCATGTAAGAACACTTGTGTTGTTACCATCTATTGG CAGTATGGATCATTGTAATGGCCTAATTTCTTTTGTCGAATGTTGATGTATGGATCATTG CAACAGACTAAGTTATTTTGTCGGTCTATGAATTAGTTATTTGTC