Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0527400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:18923609:18939279:1 gene:Os01g0527400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os01t0527400-01)
Sequence	ATGGGGCGGCGGCGGCGATTCGCGCAGCTCGCCACCACCAGCGACGACGACGACGACGAC GCCCCCGCCGCCGACGCGCCGCCCAAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCA GGCCCCAAGAAGCCGAAGCAGCGCCGCCTTTCCTCCGCGGCGGCCGACGACGACGACGAC GTCGAGGAGGACGACCTGGAGCTCGAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAG ATGCGGAGGAACGAGGAGGAGGAGCGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGC CGCCGGGGCCGCAAGCCCAAGCGCCCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAG GAGGAGGAGGCCAAGGCGGAGGAGGCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATC GGGGAGCCCGTCAAGATCACCGGCAGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTC GAGTACGAGGGCAACACCTTCGAGCTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGC AAGGAGAAACCTTATGTCGCCATCCTCAAGGATATAACAGAAACTGAGGGAAGCTTATCA GTAACTGGTCAGTGGTTTTATAGACCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGG AAAGCAAGTGACACGAGGGAGTTATTTTATAGTTTCCATATTGATGATGTGCCAGCAGAG TCAGTTATGCACAAGTGTGTAGTCCATTTCATTCCTCAACATAAGAAAATTCCCAGCCGG AAGGAACACCCTGGATTCATTGTCCAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGG AACCTAACAGACAAAGATTATGAGGATAACAAGCAACATGAGATTGATCTTCTCGTTAAG AAAACAATAGACCGTATTGGACAGCTTTCTGATATTGAACCTGCAGATGCTCCTGGTGAC AACAATGATCAGCTCTCAAACAAGCGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGAT GTTTCAAGAGATGATGCTTTAGCAGGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCT GGAAGTGATAAGCTAAAGAATTATGCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGAT CAATATCGTGATAGGTGGCTTGATAAATTAGTGGATACTATTCCACTAACATCAAAGGAA AGTGCTGGGGCTTCTCATGCTGATCCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCA TCTGCAAAGGAAGACAATGAAAAATCTTATTCACCTGATGTGATTGTTTCAATAATGGCC TCCTTAGAAAGATCTACTTATGAAGCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAA TTGAGACAGTTACTGTTCAACATCAAGAATAGCCCTGTACTACGGAACCGGCTGATGAAC AAGGAGCTTGATCCTCCAGTCCTGTTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTG ACAGCAGCAGAGAGAACATCTGAACCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCA CGATGTGTAAGATGTGCAGAAAAGGAAGTAGGTGTATCTGATATTATTCATGCTGGTCAT GGAGATCGCTATCAGCTCGAATGTAACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGAT GCCATCACAACCCTGACAGTGGATACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCA CCATGGGCAACAGCCAAGTTCGATGTCATGGAGAAGCAGCTCACGAGCCCACGGGATCAT CAGCCGGACAAGCCGTTGGCCGATGCTCTCCACAAGAGCGCGGCACCGTACATGCCCACG CTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCA GCTGGCCACGAGTAG

Peptide Sequence

PEP ID	Os01t0527400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:18923609:18939279:1 gene:Os01g0527400 transcript:Os01t0527400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os01t0527400-01)
Sequence	MGRRRRFAQLATTSDDDDDDAPAADAPPKAKPPPPPSSSSGPKKPKQRRLSSAAADDDDD VEEDDLELEEEEEDEKDLEEMRRNEEEERREETQTRRRRRRRGRKPKRPAEESEEDEEEE EEEAKAEEAREEENTEAVPIGEPVKITGRGKKQRKHYTSFEYEGNTFELEDPVLLTPEDS KEKPYVAILKDITETEGSLSVTGQWFYRPEEADKKGGGSWKASDTRELFYSFHIDDVPAE SVMHKCVVHFIPQHKKIPSRKEHPGFIVQKVYDTVAKKLWNLTDKDYEDNKQHEIDLLVK KTIDRIGQLSDIEPADAPGDNNDQLSNKRGLRKRPVLPIDVSRDDALAGKSEQFGKAETP GSDKLKNYATLVKYKAVTGDQYRDRWLDKLVDTIPLTSKESAGASHADPGGATKSSTNGS SAKEDNEKSYSPDVIVSIMASLERSTYEALGSDFQKYNQKLRQLLFNIKNSPVLRNRLMN KELDPPVLLTMSPDELKVGLTAAERTSEPEESRKLQMTDARCVRCAEKEVGVSDIIHAGH GDRYQLECNACGHSWFSSRDAITTLTVDTPTSAGGSVGTAPWATAKFDVMEKQLTSPRDH QPDKPLADALHKSAAPYMPTLEKQKSFGKHKPDEPSSAPAAGHE

Transcript Sequence

Transcript ID	Os01t0527400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:18923609:18939279:1 gene:Os01g0527400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription elongation factor S-II, central region domain containing protein. (Os01t0527400-01)
Sequence	TCCCCAATTTCTTCTGGAAACCCTCCGCGGCACGGGCGAAATGGGGCGGCGGCGGCGATT CGCGCAGCTCGCCACCACCAGCGACGACGACGACGACGACGCCCCCGCCGCCGACGCGCC GCCCAAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCAGGCCCCAAGAAGCCGAAGCA GCGCCGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTCGAGGAGGACGACCTGGA GCTCGAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGA GGAGCGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAA GCGCCCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGA GGAGGCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCAC CGGCAGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTCGAGTACGAGGGCAACACCTT CGAGCTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGCAAGGAGAAACCTTATGTCGC CATCCTCAAGGATATAACAGAAACTGAGGGAAGCTTATCAGTAACTGGTCAGTGGTTTTA TAGACCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGGAAAGCAAGTGACACGAGGGA GTTATTTTATAGTTTCCATATTGATGATGTGCCAGCAGAGTCAGTTATGCACAAGTGTGT AGTCCATTTCATTCCTCAACATAAGAAAATTCCCAGCCGGAAGGAACACCCTGGATTCAT TGTCCAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGGAACCTAACAGACAAAGATTA TGAGGATAACAAGCAACATGAGATTGATCTTCTCGTTAAGAAAACAATAGACCGTATTGG ACAGCTTTCTGATATTGAACCTGCAGATGCTCCTGGTGACAACAATGATCAGCTCTCAAA CAAGCGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGATGTTTCAAGAGATGATGCTTT AGCAGGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAA TTATGCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCT TGATAAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGC TGATCCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGA AAAATCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTA TGAAGCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAA CATCAAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGT CCTGTTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATC TGAACCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCACGATGTGTAAGATGTGCAGA AAAGGAAGTAGGTGTATCTGATATTATTCATGCTGGTCATGGAGATCGCTATCAGCTCGA ATGTAACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGATGCCATCACAACCCTGACAGT GGATACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCACCATGGGCAACAGCCAAGTT CGATGTCATGGAGAAGCAGCTCACGAGCCCACGGGATCATCAGCCGGACAAGCCGTTGGC CGATGCTCTCCACAAGAGCGCGGCACCGTACATGCCCACGCTGGAGAAGCAGAAATCGTT CGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAG ACGGTCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAG AGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGAT GTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAA CTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAA TGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGAT CGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTACTTCCCATCAATTCTGCTCGAGCTGT ATCTGTTTGTACCCAAATGATACGGGCATCAGGAGTATGCAACCCAACTATGACCAATAA AAAAAATTCCCTGCCC