Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0517800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:18364957:18366441:-1 gene:Os01g0517800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0517800-01)
Sequence

ATGAAGGGAGAATTTGTGCCTCCATGGTTAGAGCTCTTGCTTTCCACACAGTTTTTTAAC
ACCTGCACTAGCCATCACAACTCCCCTCGCAATGAATGCAACCTGTTTTGCATCGATTGC
CAAGCACCAGAAGCTGCCTTTTGCTATTACTGTCGTTCATGTCATCATTCTTCTCATCGT
GTAATCCAGATTAGGCGATCATCATACCACGACGTGGTAAAAGTATCTGAGTTAGAGGAT
ATCCTTGATATCAGCGATGTACAAACCTATGTAATCAACAGTGCAAGGGTTGTGTTTTTG
AATGAGCGACCTCAGCTACGTGGTTGTGGTGTTTTGGCAATAAAATCATCGCCATCCTCA
TTGTCCTCTTATAATTGTGAGACTTGTAGCCGTGTTCTTCTTGATGCATTCCGCTTCTGC
TCACTTGGTTGCAATGTAAGTTATAAACCTCTTCAACAAGTACTATTCAAACTAATATTG
TTATGCAATTTAATATGTAGTCAAATACTTGGATAA

Peptide Sequence

PEP ID

Os01t0517800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:18364957:18366441:-1 gene:Os01g0517800 transcript:Os01t0517800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0517800-01)
Sequence

MKGEFVPPWLELLLSTQFFNTCTSHHNSPRNECNLFCIDCQAPEAAFCYYCRSCHHSSHR
VIQIRRSSYHDVVKVSELEDILDISDVQTYVINSARVVFLNERPQLRGCGVLAIKSSPSS
LSSYNCETCSRVLLDAFRFCSLGCNVSYKPLQQVLFKLILLCNLICSQILG

Transcript Sequence

Transcript ID

Os01t0517800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:18364957:18366441:-1 gene:Os01g0517800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0517800-01)
Sequence

AGATAGGCCTAAGAATCCTCTTGTGTTCACCATGAAGGGAGAATTTGTGCCTCCATGGTT
AGAGCTCTTGCTTTCCACACAGTTTTTTAACACCTGCACTAGCCATCACAACTCCCCTCG
CAATGAATGCAACCTGTTTTGCATCGATTGCCAAGCACCAGAAGCTGCCTTTTGCTATTA
CTGTCGTTCATGTCATCATTCTTCTCATCGTGTAATCCAGATTAGGCGATCATCATACCA
CGACGTGGTAAAAGTATCTGAGTTAGAGGATATCCTTGATATCAGCGATGTACAAACCTA
TGTAATCAACAGTGCAAGGGTTGTGTTTTTGAATGAGCGACCTCAGCTACGTGGTTGTGG
TGTTTTGGCAATAAAATCATCGCCATCCTCATTGTCCTCTTATAATTGTGAGACTTGTAG
CCGTGTTCTTCTTGATGCATTCCGCTTCTGCTCACTTGGTTGCAATGTAAGTTATAAACC
TCTTCAACAAGTACTATTCAAACTAATATTGTTATGCAATTTAATATGTAGTCAAATACT
TGGATAATGAAATTTGTGAGTGCAAACATTGTCCACTTTTAAGAAAGCAATAAAAAAAAT
GTGATTTCACACTTAGATGGAATGCTTGTTGTAGGTTGTGCTTTGTTCAATTATTATTTA
CTTTCACATTTTAAATTAGAACCTTTTACCTTATGTGTTATTCCACATGTTATGATGCTA
AAATTTTCCACAGCTCATAGGCATAAAAAATGATGTGGAGACAGTTGTAGCTAACGATGG
TATTGCCCACAATGATAAAGACATAGAGATTGATGGCAGCAATGGTACTGCAAACACCAA
TGGTACTGGAAAGGGCATAGAGATTTGTGGCAACAACGGTACTATTGCAAATACTGGAAA
TGAGGATGAAATATGTAGTGATGCTAGCAAGAATAAGGAAATACTATCATCAACAAGGGT
TGTTCGTCACCGACGGAAGGGAATTCCTCGTCGTGCACCATTTTTCTGAATGAAAACTTC
TTTCGATGTTACTGAATAAAAAAATAAATGGACCCTTTGTGTTATTATGTCCTCCATAGA
TCTTTTGTTAGTTCTATTACAGATCTATGGAGCTCATATTAGTTCTATCACAATTTTTGC
TATTGTTGAGTTATGGCAATATTCCATAAATTATAATTTTGGTATGATTAAAAATGATTT
GGTAGTAATACAATAATAATTTGTGCCT