Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0514700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:18205177:18208214:1 gene:Os01g0514700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0514700-01)
Sequence

ATGGTGCTCCTCCTGCTGCTCCTGCTCGCGCTCCCGGCGGCGGCGGGCGGGCTGGCGGCG
GACGGGCAGGCGCTGCTGGCCTTCAAGGCGGCCGTGCTGCGGGACCCCGAGGGCGCGCTC
GCCGACTGGGACGCCTCCACCGCCGCCGACCCCTGCGCCTGGAACGGCGTCTCCTGCGGC
GCCGGGTCCGGGGCCGGGGGCGCCGACCGCCGCGTCGTGGCGCTGTCCCTCCCGAGGAAG
GGCCTCGTGGGCTCCCTCCCGGCGTCGCCGCTCCCGGCCTCGCTCCGCCACCTCAACCTC
CGCAGCAACCGCCTCTTCGGCGAGCTCCCCGCGCCGCTCCTCTCCGCTGCGGCGGGGCTG
CAGAGCGTCGTGCTGTACGGGAACGAGCTGTACGGGCCGATCCCGCCGGAGCTCGGCGAC
CTCCCCTACCTCCAAATCCTCGACCTCTCCTCCAACTCCCTCAACGGCACGCTCCCGCCC
GCGATCCTGAGATGCCGCCGCCTCCGCTCCCTCGCGCTCGGCTGGAACAACCTCACCGGC
GCGCTGCCGCAGGGGTTTGCCAGGGGCCTGTCGGCGCTGGAGCACCTCGATTTGTCCCAC
AACCGCTTCTCCGGCGCCGTCCCGGAGGACATCGGCAACCTGTCCAGGCTCGAGGGGACG
GTCGACCTCTCGCACAACCAGTTCTCCGGCCAGATTCCGGCGAGCCTTGGAAGATTGCCG
GAGAAGGTCTACATTGATCTCACGTACAACAATCTGTCCGGCCCGATTCCGCAGAATGGG
GCGCTGGAGAACCGGGGGCCGACGGCGTTCGTCGGCAACCCGGGCCTCTGCGGGCCGCCG
CTCAAGAACCCGTGCTCGCCGGACGCCATGCCGTCGTCCAATCCGTTTGTGCCCAAGGAT
GGGGGCTCCGGCGCCCCCGGTGCTGGGAAGAACAAGGGGTTGGGGAAGGTTGCCATTGTA
GCCATTGTGCTCAGTGATGTGGTGGGGATTCTGATCATTGCACTGGTGTTCTTCTACTGC
TATTGGAGGGCTGTTTCCTCCAAGGAGAAGGGGAATGGTGGGGCTGCTGGTTCTAAGGGG
TCCAGGTGTGGCAAGGATTGTGGGTGTTTTAGCCGGGACGAATCCGCCACGCCGTCGGAG
CACACCGAGCAGTATGACCTCGTGCCGTTGGACCAGCAAGTGAGGTTCGATCTCGATGAG
CTGCTCAAGGCATCAGCATTTGTGCTTGGGAAGAGCGGCATCGGGATCGTGTATAAGGTG
GTTCTTGAGGACGGGCTTACGATGGCCGTCAGGCGGCTAGGAGAAGGGGGACTGCAGAGG
TTTAAGGAGTTCCAGACTGAGGTTGAGGCCATTGGCAAGGTCCGCCATCCCAGCATTGTT
ACCTTGAGGGCTTATTACTGGTCTTATGATGAGAAGTTGTTGATATATGATTACATCCCT
AATGGCAGCCTCTCTGCAGCAATCCATGGTAAACCTGGGACAATGACATTCACACCATTG
CCATGGGATGGACGTCTAAAAATCATGCAAGGGGTTGCAAAGGGGCTATCTTTCTTGCAT
GAATTTAGCCCTAAAAAGTATATCCATGGGGACTTAAGGCCAAATAATGTCCTCCTTGGA
TCAAACATGGAGCCATACATATCAGATTTTGGGCTCGGACGGCTTGCAAATATTGCTGGA
GGATCACCTTTCACACAATCAGATCATGCTGGTATAGAGAAAGCTCAGAGCCAGCAGTCC
GATGCCTCGGTGAGCCCTCTTGTGGGCAAAGGATCATGCTATCAAGCACCAGAAGCACTG
AAAACACTGAAACCATCTCAGAAATGGGATGTATACTCCTATGGTGTGATCTTGCTGGAA
ATGATCACCGGCAGATCGCCGGTTGTTCTCTTGGAGACTATGCAGATGGACCTTGTGCAA
TGGGTGCAGTTCTGTATTGAAGAAAAGAAACCATCTGCCGATGTGCTCGATCCTTCTCTC
GCCAGAGACTCTGAACGGGAAGATGAGATGATCGCAGCACTGAAAGTTGCTCTCGCTTGC
GTTCAGGCCAATCCAGAGCGAAGGCCCTCTATGAGGCATGTCGCAGAAACCCTGGATCAC
CTCAATGGTTCAGGCTAG

Peptide Sequence

PEP ID

Os01t0514700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:18205177:18208214:1 gene:Os01g0514700 transcript:Os01t0514700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0514700-01)
Sequence

MVLLLLLLLALPAAAGGLAADGQALLAFKAAVLRDPEGALADWDASTAADPCAWNGVSCG
AGSGAGGADRRVVALSLPRKGLVGSLPASPLPASLRHLNLRSNRLFGELPAPLLSAAAGL
QSVVLYGNELYGPIPPELGDLPYLQILDLSSNSLNGTLPPAILRCRRLRSLALGWNNLTG
ALPQGFARGLSALEHLDLSHNRFSGAVPEDIGNLSRLEGTVDLSHNQFSGQIPASLGRLP
EKVYIDLTYNNLSGPIPQNGALENRGPTAFVGNPGLCGPPLKNPCSPDAMPSSNPFVPKD
GGSGAPGAGKNKGLGKVAIVAIVLSDVVGILIIALVFFYCYWRAVSSKEKGNGGAAGSKG
SRCGKDCGCFSRDESATPSEHTEQYDLVPLDQQVRFDLDELLKASAFVLGKSGIGIVYKV
VLEDGLTMAVRRLGEGGLQRFKEFQTEVEAIGKVRHPSIVTLRAYYWSYDEKLLIYDYIP
NGSLSAAIHGKPGTMTFTPLPWDGRLKIMQGVAKGLSFLHEFSPKKYIHGDLRPNNVLLG
SNMEPYISDFGLGRLANIAGGSPFTQSDHAGIEKAQSQQSDASVSPLVGKGSCYQAPEAL
KTLKPSQKWDVYSYGVILLEMITGRSPVVLLETMQMDLVQWVQFCIEEKKPSADVLDPSL
ARDSEREDEMIAALKVALACVQANPERRPSMRHVAETLDHLNGSG

Transcript Sequence

Transcript ID

Os01t0514700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:18205177:18208214:1 gene:Os01g0514700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os01t0514700-01)
Sequence

ACTGTGACGCACTAGTCTTCTTCCCACTCGCGGTCGCGGCGAGTACGTACGTGACCGAAT
GGTGCTCCTCCTGCTGCTCCTGCTCGCGCTCCCGGCGGCGGCGGGCGGGCTGGCGGCGGA
CGGGCAGGCGCTGCTGGCCTTCAAGGCGGCCGTGCTGCGGGACCCCGAGGGCGCGCTCGC
CGACTGGGACGCCTCCACCGCCGCCGACCCCTGCGCCTGGAACGGCGTCTCCTGCGGCGC
CGGGTCCGGGGCCGGGGGCGCCGACCGCCGCGTCGTGGCGCTGTCCCTCCCGAGGAAGGG
CCTCGTGGGCTCCCTCCCGGCGTCGCCGCTCCCGGCCTCGCTCCGCCACCTCAACCTCCG
CAGCAACCGCCTCTTCGGCGAGCTCCCCGCGCCGCTCCTCTCCGCTGCGGCGGGGCTGCA
GAGCGTCGTGCTGTACGGGAACGAGCTGTACGGGCCGATCCCGCCGGAGCTCGGCGACCT
CCCCTACCTCCAAATCCTCGACCTCTCCTCCAACTCCCTCAACGGCACGCTCCCGCCCGC
GATCCTGAGATGCCGCCGCCTCCGCTCCCTCGCGCTCGGCTGGAACAACCTCACCGGCGC
GCTGCCGCAGGGGTTTGCCAGGGGCCTGTCGGCGCTGGAGCACCTCGATTTGTCCCACAA
CCGCTTCTCCGGCGCCGTCCCGGAGGACATCGGCAACCTGTCCAGGCTCGAGGGGACGGT
CGACCTCTCGCACAACCAGTTCTCCGGCCAGATTCCGGCGAGCCTTGGAAGATTGCCGGA
GAAGGTCTACATTGATCTCACGTACAACAATCTGTCCGGCCCGATTCCGCAGAATGGGGC
GCTGGAGAACCGGGGGCCGACGGCGTTCGTCGGCAACCCGGGCCTCTGCGGGCCGCCGCT
CAAGAACCCGTGCTCGCCGGACGCCATGCCGTCGTCCAATCCGTTTGTGCCCAAGGATGG
GGGCTCCGGCGCCCCCGGTGCTGGGAAGAACAAGGGGTTGGGGAAGGTTGCCATTGTAGC
CATTGTGCTCAGTGATGTGGTGGGGATTCTGATCATTGCACTGGTGTTCTTCTACTGCTA
TTGGAGGGCTGTTTCCTCCAAGGAGAAGGGGAATGGTGGGGCTGCTGGTTCTAAGGGGTC
CAGGTGTGGCAAGGATTGTGGGTGTTTTAGCCGGGACGAATCCGCCACGCCGTCGGAGCA
CACCGAGCAGTATGACCTCGTGCCGTTGGACCAGCAAGTGAGGTTCGATCTCGATGAGCT
GCTCAAGGCATCAGCATTTGTGCTTGGGAAGAGCGGCATCGGGATCGTGTATAAGGTGGT
TCTTGAGGACGGGCTTACGATGGCCGTCAGGCGGCTAGGAGAAGGGGGACTGCAGAGGTT
TAAGGAGTTCCAGACTGAGGTTGAGGCCATTGGCAAGGTCCGCCATCCCAGCATTGTTAC
CTTGAGGGCTTATTACTGGTCTTATGATGAGAAGTTGTTGATATATGATTACATCCCTAA
TGGCAGCCTCTCTGCAGCAATCCATGGTAAACCTGGGACAATGACATTCACACCATTGCC
ATGGGATGGACGTCTAAAAATCATGCAAGGGGTTGCAAAGGGGCTATCTTTCTTGCATGA
ATTTAGCCCTAAAAAGTATATCCATGGGGACTTAAGGCCAAATAATGTCCTCCTTGGATC
AAACATGGAGCCATACATATCAGATTTTGGGCTCGGACGGCTTGCAAATATTGCTGGAGG
ATCACCTTTCACACAATCAGATCATGCTGGTATAGAGAAAGCTCAGAGCCAGCAGTCCGA
TGCCTCGGTGAGCCCTCTTGTGGGCAAAGGATCATGCTATCAAGCACCAGAAGCACTGAA
AACACTGAAACCATCTCAGAAATGGGATGTATACTCCTATGGTGTGATCTTGCTGGAAAT
GATCACCGGCAGATCGCCGGTTGTTCTCTTGGAGACTATGCAGATGGACCTTGTGCAATG
GGTGCAGTTCTGTATTGAAGAAAAGAAACCATCTGCCGATGTGCTCGATCCTTCTCTCGC
CAGAGACTCTGAACGGGAAGATGAGATGATCGCAGCACTGAAAGTTGCTCTCGCTTGCGT
TCAGGCCAATCCAGAGCGAAGGCCCTCTATGAGGCATGTCGCAGAAACCCTGGATCACCT
CAATGGTTCAGGCTAGAAAAGTAGTATCATGGAAGGCGGTCATTTTTTAGAGCATTTGAT
GGTTGTACAGCTCAAGGAAGGCAAGGAAGCTTAGGTGACTCAAGCTTCATCAGTTCGCTA
TGTAAAATTGTCATTTTCGCAGGACCCTCAGATTCTGCTCCGCTCTTAACATGTTAGATA
GCCTTTTTCTGTTAGCTTGCTATCATGAGTTATGACTATTGTGCTTGCCTATAAGTCATG
GGAATGGGTGAATTTAACTGTGTATGCTTGCAGCTTGCTCTCTGATAGTCTGAATGAACA
AGAACTGATAGGATTATATGGAGCACTTTGTTTGGAGAACAGAGCCACGGATGTCATTGA
GATAGGGGTGGCAAATAGTTATTTGCCAAATCTAAAAGTGGCAAATAGTTAAAACCCCCT
CTCCTTGTACTACTTAATTGGTATCAATTTTTTTTT