Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0514300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:18163750:18173557:1 gene:Os01g0514300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0514300-01)
Sequence	ATGGAGGCGACGGGGGCGGGGGCGGGGGAGGAGCGGTGGGCGTCGCTGTGCAACTGCGTG GTGAACTTCCTGCTGGAGGAGAGGTACCACCTCACGGCGCTCGAGCTGTTGCAGGAGCTG CAGGAGGACGGCCGCCACGCGCACGCGCTCCGCCTCCGCTCCTTCTTCTCCGACCCCGCG CTGTTCCCGCCCGACCTCGTCGCCCGCGCGTCCTCCGCGCCGCCCGGTGCTGATCCACAG AGCTTGCTGGAAGAGAAAATAGCGGCAGAAGAAAAGTTGGCCCTCACTGATTATGATCTC CGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCT TCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGAC AAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTG AACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTC ATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCT GATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAA AAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCT GAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGA AAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTG AAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGTCC CTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGAT GGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACAAT CTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGGGT AAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAGCA GAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAATCT GGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAAT AGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAG AAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAA ATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAG CTTCTTCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCC TTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATA ATGGATGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTA CTTCCACAATGTTGGGAACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCC CAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTA TCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACAT AACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGGAG CTAATGTTCCAGTTGGTCTGTGACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGGAA CTTGTTCCTGCTGTTGTAAGATGGGGAGATAAACTGGATCAGATATTGAGAATCTTACTG GCACATATCCTGGCATCCGCTCAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAATA GACTCTCATCTCCGTGTTTTAGGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCCGC ATGTTGACCGAGTTGCTACCATTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTGCT GCTGATCCTTCTACAGGCACTATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAACTG TATGCAGCAGGTGACACAGAGTGGTCAGCATTTGAATGGATGCACACTGAGTGTCTACCG GATTTGATCAAGCTTGCTTGCCTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGATC AGGAAGTACCTATTGGATGTATCGGGACGTTATGGCATAGATTATCTGGAACACGTTATG CTACCTGTATTTCTTGTAGCAGCGGGGGATATTGACAGCAGTGATTTCACCTATTTTCCT CTGGCAACCCAGTCTAGAGTTCGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAACTT GGAATTGTGTGTGTCCTTCCATTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAACGT CAACAATTAGAAGAATATTTGAGAAAATTACTTATCCAGAACACGAAGGATGGTTCATTT TCTATGCATCACACTGCTGAGATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGGAG CACCATGTTGCTGTATTTAATATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACCTA AAAACCAATGCTGCAGCTCTACTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAGCA TCAACTCATGTTTTGCCAGCACTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAAAA TATGCTAGTATAGAAGCATTTGGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTGTT GACAAGATACGAATTCAAATGGATGCTTTTCTTGAAGATGGATCACATGAAGCTACTGTT TCTGTTATTCGTGCACTTGCAGTGGCAGTGCCACATACAACAGATAGACTACGTGAATAT CTTTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGG CGTCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTT CCTGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTG GATGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGA GGTAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATG AGCAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGAT ACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTT GGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGAT GAGCCCAGTTAA

Peptide Sequence

PEP ID	Os01t0514300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:18163750:18173557:1 gene:Os01g0514300 transcript:Os01t0514300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0514300-01)
Sequence	MEATGAGAGEERWASLCNCVVNFLLEERYHLTALELLQELQEDGRHAHALRLRSFFSDPA LFPPDLVARASSAPPGADPQSLLEEKIAAEEKLALTDYDLRLAREDLSRLKLELQKQKES SPDGSNATDALTNEGSSHHDKRDAKISTLGPLKDNERKDLNCAVKEYLLLAGYRLAAMTF IEEVPDQDLDVWINSSACVPDALRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGA EKDALIKSREVANSQIAALRKSLEAAHKDIKEKEKTVQDLKQSLDVQRKELNDCRAEITS LKMHIEGTRSSKRLSSGDTDGLIPANSMEEIVVLSSEHDNLKGSESITSKLASEVSLAEG KKKDHENMESSLEGSPGPEAEVSCSTAENSGYGTSGEDKSGTNTCFEDLSVNGNLHGSGN SQGDSDSISVYLTDDKVHTEKVESPYKQKSSDKMALETIKIVSDALPKIVPYVLINHREE LLPLIICAIEKHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEMRTETEL LPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVVREAATH NLTLLLPLFPNLDKYYKVEELMFQLVCDPSGAVVNVALKELVPAVVRWGDKLDQILRILL AHILASAQRCPPVSGVEGAIDSHLRVLGEQERWNIDVLLRMLTELLPFIHQKAISTCPFA ADPSTGTMPESYFSKSCLKLYAAGDTEWSAFEWMHTECLPDLIKLACLLPAKEDNLRTVI RKYLLDVSGRYGIDYLEHVMLPVFLVAAGDIDSSDFTYFPLATQSRVRGLRPKTSIAEKL GIVCVLPLLLSGILGYPSKRQQLEEYLRKLLIQNTKDGSFSMHHTAEIIDAVRFLCMFEE HHVAVFNIVWEMVVISDANLKTNAAALLKALVPYISVKVASTHVLPALITLGSDQNLTVK YASIEAFGAVAQHFKNDMVVDKIRIQMDAFLEDGSHEATVSVIRALAVAVPHTTDRLREY LLTKIFKLTSAPPTGNDIERRREIANVFCEALRAVDATDLPATSVRDLLLPSIQNLLKDL DALDPAHKEALEVIARERSGGKLESLGKVMGAHLGIASSMSSFFGESSLLVKKESGEQHD TAATTPSQPTPQTQQENTRFGRIMLGGFGDMLRGKAKGSDEPS

Transcript Sequence

Transcript ID	Os01t0514300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:18163750:18173557:1 gene:Os01g0514300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os01t0514300-01)
Sequence	GCCTTCGCCTCTCTCGTCTCGTCCGAGTTTCCGACCCGACCCACCGGCCTCTCTCGAGAT CCACCGACCACCGCATGCGGCGGGAGCGCGCCTCGTCGCCGGCGGCTGATTGACCGGGTG GGGCGCCGGCGACCGCCACCACCACCAGATCCCGAGGTGATGGAGGCGACGGGGGCGGGG GCGGGGGAGGAGCGGTGGGCGTCGCTGTGCAACTGCGTGGTGAACTTCCTGCTGGAGGAG AGGTACCACCTCACGGCGCTCGAGCTGTTGCAGGAGCTGCAGGAGGACGGCCGCCACGCG CACGCGCTCCGCCTCCGCTCCTTCTTCTCCGACCCCGCGCTGTTCCCGCCCGACCTCGTC GCCCGCGCGTCCTCCGCGCCGCCCGGTGCTGATCCACAGAGCTTGCTGGAAGAGAAAATA GCGGCAGAAGAAAAGTTGGCCCTCACTGATTATGATCTCCGGCTAGCCAGAGAAGATCTT TCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCT ACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCA ACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATAC TTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAG GACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTAC TATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAA AATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACAC AAGGACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTGAAGCAATCATTGGATGTCCAG AGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGG ACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCT ATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACAATCTAAAAGGATCCGAATCCATA ACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGGGTAAAAAGAAAGATCATGAAAAT ATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAGCAGAAGTTTCCTGCTCAACTGCT GAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAATCTGGCACAAACACTTGCTTTGAA GATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATAGCCAGGGGGATTCAGATAGC ATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAAAGTAGAGAGTCCTTATAAA CAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAATAGTTTCGGATGCTCTTCCA AAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCTTCTTCCGTTGATCATCTGT GCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTTAACTCATACGTTGTTCAAT CTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAATGGATGCTTGTGTGGAGCTT GCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACTTCCACAATGTTGGGAACAG ATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCA GTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTT GAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTGCTTCCT CTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGGAGCTAATGTTCCAGTTGGTCTGT GACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGGAACTTGTTCCTGCTGTTGTAAGA TGGGGAGATAAACTGGATCAGATATTGAGAATCTTACTGGCACATATCCTGGCATCCGCT CAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAATAGACTCTCATCTCCGTGTTTTA GGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCCGCATGTTGACCGAGTTGCTACCA TTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTGCTGCTGATCCTTCTACAGGCACT ATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAACTGTATGCAGCAGGTGACACAGAG TGGTCAGCATTTGAATGGATGCACACTGAGTGTCTACCGGATTTGATCAAGCTTGCTTGC CTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGATCAGGAAGTACCTATTGGATGTA TCGGGACGTTATGGCATAGATTATCTGGAACACGTTATGCTACCTGTATTTCTTGTAGCA GCGGGGGATATTGACAGCAGTGATTTCACCTATTTTCCTCTGGCAACCCAGTCTAGAGTT CGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAACTTGGAATTGTGTGTGTCCTTCCA TTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAACGTCAACAATTAGAAGAATATTTG AGAAAATTACTTATCCAGAACACGAAGGATGGTTCATTTTCTATGCATCACACTGCTGAG ATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGGAGCACCATGTTGCTGTATTTAAT ATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACCTAAAAACCAATGCTGCAGCTCTA CTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAGCATCAACTCATGTTTTGCCAGCA CTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAAAATATGCTAGTATAGAAGCATTT GGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTGTTGACAAGATACGAATTCAAATG GATGCTTTTCTTGAAGATGGATCACATGAAGCTACTGTTTCTGTTATTCGTGCACTTGCA GTGGCAGTGCCACATACAACAGATAGACTACGTGAATATCTTTTAACTAAGATATTTAAG CTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGGCGTCGTGAGATAGCAAATGTA TTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTTCCTGCTACAAGCGTACGTGAT CTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTGGATGCTCTAGACCCTGCACAC AAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGAGGTAAACTTGAGAGCCTTGGC AAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATGAGCAGCTTCTTTGGTGAGAGC AGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGATACTGCTGCCACGACCCCCTCT CAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGGTCGTATAATGCTGGGTGGT TTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGAGCCCAGTTAAAATTTAACA AATACATGCCCAGTTGTTAATTCTTCATATTTTTTTCCAGCTCCATTTTCTCTGGTAACA TGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTTTATTCATTGTTGGTAAGGCGGGG AGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTGAGAGTAAAGCATACATATTTTTG TTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAGGTAAATCATGTTGTACATTCTGA TCAGAGTACAGTTTTAG