Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0511200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:17994680:17997769:-1 gene:Os01g0511200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0511200-01)
Sequence

ATGGCTTTAAGTTCATCCATTAGCATGTCTCGGCGTCTTTTCAAGGGACTTACTATCAAC
CCGGCATTGGCATCTGGGATGACGTGCCAGCATCACCAGCTTCAACAGCATGCGCCAGTG
AGTGGAACAGCCAAGGGTAAGGCTAAGCTCAAGTCTGGCCAACAATTGAAGCGTAACACC
ATTGGAGCAAAGAAGGGCGGCGCGCCTTCCACTGGTGGGGGTGGTGGCGGTGGGCGTGGT
CGTCGTGAGGCTATTGAGCGTATTACTCAGATTGCAGAGTCTTGTCTGAATGCCTCAACT
CCTCTGCGCCATCTATCCCCCAAGGAGCGTCTTCGTGAGGCCAAACGTGAGGAGCTTGGA
CTCATTTCTAAGGAACGTCAACGTGAACTTGATTTAGCCAAGGCTAAAGCCAAGTCCAAA
GGTACCCGTGAGGGTGATGGTGGCCGTGTGCTGATGGGTCCACCAGGTCTTGACTACATC
AGTCTTGGATTGGTTGATGAGGACGCAATCCCTAAATACGAGCTGACAGTCGAAGATGGC
CGGCGACTTGCCAAACAATACAGTCAGGTGCTAATGCGACGGCACCGCGCACGGCAAACT
GCAGAATCGTCTCTTCTAAGTCTCAAGAAGGAGGCCATTGCAGCACTCCCTGAGAAGCTG
CGAGCTGCTGCTATGATTCCTGACATGACACCATTCCCTGCAAACCGATACATGGCAACA
CTCACGCCACCAATTGAAGGGTATATTGAAAAGGTGCGGGATGCTGCCAAGAAGTATTCT
GTGAAGGAGAAACTTCGCTGA

Peptide Sequence

PEP ID

Os01t0511200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:17994680:17997769:-1 gene:Os01g0511200 transcript:Os01t0511200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0511200-01)
Sequence

MALSSSISMSRRLFKGLTINPALASGMTCQHHQLQQHAPVSGTAKGKAKLKSGQQLKRNT
IGAKKGGAPSTGGGGGGGRGRREAIERITQIAESCLNASTPLRHLSPKERLREAKREELG
LISKERQRELDLAKAKAKSKGTREGDGGRVLMGPPGLDYISLGLVDEDAIPKYELTVEDG
RRLAKQYSQVLMRRHRARQTAESSLLSLKKEAIAALPEKLRAAAMIPDMTPFPANRYMAT
LTPPIEGYIEKVRDAAKKYSVKEKLR

Transcript Sequence

Transcript ID

Os01t0511200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:17994680:17997769:-1 gene:Os01g0511200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0511200-01)
Sequence

CCGGCCCATTAACCCCCAATAGAGAGAAAAAAACCCAAAACCAAAAAACCCTAACTCTTC
TCCCCATCGATCTCCTCTCTGAGCTCTCTCCGACAGCCGCCGCCAGGCGAGGACGCGCCG
GCGCCCGTCGCCCATCGCGCCGTAGCCGACCTCATCACCTCTCCGGCGCCCCGCGGCCTG
CGCCGTCGCCCCGTCTCGCCGTCGCACCCGCACCGCCCCGGCGCCCCGCGAGCCCGCGAC
GCCGCCCGGGCCTGGCGAGTGGCGTCGGCGCGCTGCCGTCCTGTTCGTCCACCGACCATT
CACCACCGCACTTTTCCTGTCCCGAGAGCCGAGAGGCCGAAGCTTAGGTGGTGCAATGGC
TTTAAGTTCATCCATTAGCATGTCTCGGCGTCTTTTCAAGGGACTTACTATCAACCCGGC
ATTGGCATCTGGGATGACGTGCCAGCATCACCAGCTTCAACAGCATGCGCCAGTGAGTGG
AACAGCCAAGGGTAAGGCTAAGCTCAAGTCTGGCCAACAATTGAAGCGTAACACCATTGG
AGCAAAGAAGGGCGGCGCGCCTTCCACTGGTGGGGGTGGTGGCGGTGGGCGTGGTCGTCG
TGAGGCTATTGAGCGTATTACTCAGATTGCAGAGTCTTGTCTGAATGCCTCAACTCCTCT
GCGCCATCTATCCCCCAAGGAGCGTCTTCGTGAGGCCAAACGTGAGGAGCTTGGACTCAT
TTCTAAGGAACGTCAACGTGAACTTGATTTAGCCAAGGCTAAAGCCAAGTCCAAAGGTAC
CCGTGAGGGTGATGGTGGCCGTGTGCTGATGGGTCCACCAGGTCTTGACTACATCAGTCT
TGGATTGGTTGATGAGGACGCAATCCCTAAATACGAGCTGACAGTCGAAGATGGCCGGCG
ACTTGCCAAACAATACAGTCAGGTGCTAATGCGACGGCACCGCGCACGGCAAACTGCAGA
ATCGTCTCTTCTAAGTCTCAAGAAGGAGGCCATTGCAGCACTCCCTGAGAAGCTGCGAGC
TGCTGCTATGATTCCTGACATGACACCATTCCCTGCAAACCGATACATGGCAACACTCAC
GCCACCAATTGAAGGGTATATTGAAAAGGTGCGGGATGCTGCCAAGAAGTATTCTGTGAA
GGAGAAACTTCGCTGATTTTTACCTCAAGGGAGGAAAGGGTATCTAGAGGTACATGAACA
TGTCAGGCTGTCAGCTATGACAACAGAGCATACTTTGTTGATTGGCATATCAATGCAAGG
AGAAATTGGGAAGCTTGTTCAATTTTCAGTGAGTTTTTGGTCATTTTCTTCTGGCTGGGA
TGCTGCATGAATGGCAATTTCTGAAGCTCGATGGGCATTCGCTTTGTTTCATTGTTTGTT
TGTTACGAATGTTGTATGCAGCCACTTCTGTAATAAGTTCCCGGCAGTTAGATTTGCTTC
TGCCATTTAGATTTTGCGAACTTTTTTTTT