Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0511100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:17990846:17993750:-1 gene:Os01g0511100 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0511100-01)
Sequence

ATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACGAG
AGCGAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCGCG
CCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCC
TCCTTCGGCTCCCCTCTGGGCACCCCCGTTGTAGCCCCGGAGCTGATCAAGGCGATGCAG
GAGCAGCAGCAGCAGCTCTCGCAGGCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAG
CATGGGGTGGCTGTAGAGACAATGATCAAAGTAGGAGATCCTAAGGAGATGATATGTCAA
GCAGCTGAGGAATCAAAGGTTGATTTACTGATCGTTGGGAGTCACAGCCGTGGACCTGTA
CAAAGGTTGTTTCTTGGAAGTGTCAGCAATTACTGTATGCATCATTCGAAGTGCCCAGTT
CTTGTTGTGAAGAAGCAGGAGTAA

Peptide Sequence

PEP ID

Os01t0511100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:17990846:17993750:-1 gene:Os01g0511100 transcript:Os01t0511100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0511100-01)
Sequence

MASPSAPGPKLQKAMVAVDESEFSHHALEWALRNLAPTIAPPLLVLTVQPLLPLGYVSAA
SFGSPLGTPVVAPELIKAMQEQQQQLSQALLDKAKQICAQHGVAVETMIKVGDPKEMICQ
AAEESKVDLLIVGSHSRGPVQRLFLGSVSNYCMHHSKCPVLVVKKQE

Transcript Sequence

Transcript ID

Os01t0511100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:17990846:17993750:-1 gene:Os01g0511100 gene_biotype:protein_coding transcript_biotype:protein_coding description:UspA domain containing protein. (Os01t0511100-01)
Sequence

AAATTTTGATACTTCCAAGTCGCGCGTGATTTGTCAGCTGTTAGTTGTCACACCTACTCA
TCAGCCAACCAATTCGCCATCAATAGCAAACCAAGCGGATTGATCATCTCATCTCATCTC
ATCGACCGAGCATTCTAGCGAGCGAGCGGCCAAGCCAGCAAGATCGACTCCTCACTCTCT
CACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCAGCGTAGCAAGGGGTTGCGA
GAATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACG
AGAGCGAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCG
CGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCG
CCTCCTTCGGCTCCCCTCTGGGCACCCCCGTTGTAGCCCCGGAGCTGATCAAGGCGATGC
AGGAGCAGCAGCAGCAGCTCTCGCAGGCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGC
AGCATGGGGTGGCTGTAGAGACAATGATCAAAGTAGGAGATCCTAAGGAGATGATATGTC
AAGCAGCTGAGGAATCAAAGGTTGATTTACTGATCGTTGGGAGTCACAGCCGTGGACCTG
TACAAAGGTTGTTTCTTGGAAGTGTCAGCAATTACTGTATGCATCATTCGAAGTGCCCAG
TTCTTGTTGTGAAGAAGCAGGAGTAAATAAGCTTTCCGAATCTCAATAAAAATCTTTGTG
TATTGTCGATGTGTTATCCTCAACAATGCAATAAACAAAGCCGTATTAGATGATATTCAG
ATAACTGAATAATGTATTGTGTAAATAGTCAAGATTATCTTGCAAATAAATATCCGCTTC
TTGTTGCTGTAAAGTAAGGGCGTTTCCTTTAGGAGTATCATCCATGTAGCTGGCATCTGT
TGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGATATGTGTGTATGTTT
TGTTACTTAT