Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0510800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:17960990:17968544:-1 gene:Os01g0510800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATA BOX BINDING PROTEIN-ASSOCIATED FACTOR 6 description:Histone-fold domain containing protein. (Os01t0510800-01)
Sequence	ATGAGCATAGTGCCCAAAGAGACGATTGAGGTGATCGGGCAGAGCGTCGGCATCGCCAAC CTCCCCGCCGATGTCTCCGCCGCGCTCGCCCCCGACGTGGAGTACCGCCTCCGCGAGATC ATGCAGGAGGCCATCAAGTGTATGCGGCATGCAAAGAGGACAGTCCTGACTGCCGATGAT GTTGATAGTGCTCTCAGCCTCAGGAATGTTGAGCCTGTATATGGATTTGCTTCCGGTGAC CCCTTGCGGTTTAAGAGAGCTGTGGGACACAAGGATCTCTTCTATATTGATGACAGGGAG GTAGACTTCAAAGAGATTATTGAGGCCCCTCTACCTAAAGCTCCTCTTGATACAGCAGTT GTAGCTCACTGGCTAGCCATTGAGGGAGTCCAGCCTGCAATTCCAGAGAATCCTCCTGTA GATGCTATCGTAGCACCAACAGAGAATAAAAGGACAGAGCATGGGAAAGATGATGGACTT CCTGTTGACATCAAGCTTCCTGTTAAGCATGTGTTATCTAGAGAACTCCAGATGTATTTT GATAAAATAGCAGAGCTTACAATGAGTAGATCTGAAACCTCAGTTTTTAGAGAAGCATTA GTGAGCTTATCAAGAGACTCAGGCCTTCATCCGTTGGTTCCTTACTTTTCCTACTTCATC GCCGATGAGGTTACCCGGAGTTTAGGTGATCTTCCTGTTTTATTTGCTCTCATGCGTGTA GTCCAAAGCCTCCTACACAATCCCCACATTCATATTGAACCATATTTGCATCAGTTGATG CCGTCAATTATCACCTGCATGGTTGCGAAAAGGCTTGGGCATAGGCTTTCAGACAACCAT TGGGAGCTTAGAGACTTCTCTGCTAATTTGGTTGGTTCAGTATGTCGAAGGTTTGGTCAT GCGTATCACAACATCCAAACCCGGGTGACAAGGACGTTGGTCCAGGGATTTCTTGATCCT CAGAAATCATTGACACAACACTATGGTGCGATTCAAGGGATATCTGCATTGGGGCCCAGT GCAATTAGGCTTCTGCTTTTGCCCAACCTCGAGACATACATGCAGCTTTTAGAGCCGGAA TTACAACTTGATAAGCAGAAAAATGAGATGAAAAGAAAGGAAGCATGGCGTGTTTATGGT GCCCTGCTGTGTGCTGCAGGAAAATGCTTATATGATCGGCTCAAGTTGTTTCCTAATTTG CTTTCTCCATCAACACGGCCTCTTTTGAGGAGTAATAAGAGAGTCGTGACTAACAACCCA AATAAACGGAAGTCTAGTACAGATCTCTCCACATCCCAGCCACCTCTGAAGAAGATGACA ACAGATGGTGCGATGAATTCTATGACTTCAGCTCCCATGCCAGGAACCATGGATGGCTTC TCCACCCAATTACCCAACCCTAGCATGACGCAAACTTCATCCTCTGGGCAATTGGTGGAA AGCACCGCATCAGGTGTGATTCGGAGGGATCAGGGAAGCAACCACACGCAAAGAGTTTCC ACAGTGCTGAGGCTAGCCTGGAAGGAGGACCAAAATGCTGGGCATCTGTTGAGTTCATTG TACGAGGTATTCGGTGAAGCCATCTTCTCCTTTGTTCAACCACCAGAGATATCGTTCTTT TTGTAG

Peptide Sequence

PEP ID	Os01t0510800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:17960990:17968544:-1 gene:Os01g0510800 transcript:Os01t0510800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATA BOX BINDING PROTEIN-ASSOCIATED FACTOR 6 description:Histone-fold domain containing protein. (Os01t0510800-01)
Sequence	MSIVPKETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV VAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLPVLFALMRV VQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFSANLVGSVCRRFGH AYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLLPNLETYMQLLEPE LQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP NKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMDGFSTQLPNPSMTQTSSSGQLVE STASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPPEISFF L

Transcript Sequence

Transcript ID	Os01t0510800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17960990:17968544:-1 gene:Os01g0510800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATA BOX BINDING PROTEIN-ASSOCIATED FACTOR 6 description:Histone-fold domain containing protein. (Os01t0510800-01)
Sequence	GCCACACTCGGTCAAATCCTCTTCTCGTCGGCTCCGGCGTGCATGCCAGCGGCGGCGGCG GCGGCGAGAAACGCTGGCGAGGAGGCAGCGGCGAGCGCTTAGATGCTAGCGAACCAGCGA AGAGGGCACTGCAGCAGTGGCGGATAGGCGGAGGCTAGAAGGGAGCAGTACGGCCAGAGA GCTAGGGTTTGGGTAATTTGGCGAGCGAGGAGCGAGGGGAGGCGAAGGGAGAAGAGGGGG GGGGGGGGGGGGGAGGAGAAAGAGCGGGGGAGGGATGAGCATAGTGCCCAAAGAGACGAT TGAGGTGATCGGGCAGAGCGTCGGCATCGCCAACCTCCCCGCCGATGTCTCCGCCGCGCT CGCCCCCGACGTGGAGTACCGCCTCCGCGAGATCATGCAGGAGGCCATCAAGTGTATGCG GCATGCAAAGAGGACAGTCCTGACTGCCGATGATGTTGATAGTGCTCTCAGCCTCAGGAA TGTTGAGCCTGTATATGGATTTGCTTCCGGTGACCCCTTGCGGTTTAAGAGAGCTGTGGG ACACAAGGATCTCTTCTATATTGATGACAGGGAGGTAGACTTCAAAGAGATTATTGAGGC CCCTCTACCTAAAGCTCCTCTTGATACAGCAGTTGTAGCTCACTGGCTAGCCATTGAGGG AGTCCAGCCTGCAATTCCAGAGAATCCTCCTGTAGATGCTATCGTAGCACCAACAGAGAA TAAAAGGACAGAGCATGGGAAAGATGATGGACTTCCTGTTGACATCAAGCTTCCTGTTAA GCATGTGTTATCTAGAGAACTCCAGATGTATTTTGATAAAATAGCAGAGCTTACAATGAG TAGATCTGAAACCTCAGTTTTTAGAGAAGCATTAGTGAGCTTATCAAGAGACTCAGGCCT TCATCCGTTGGTTCCTTACTTTTCCTACTTCATCGCCGATGAGGTTACCCGGAGTTTAGG TGATCTTCCTGTTTTATTTGCTCTCATGCGTGTAGTCCAAAGCCTCCTACACAATCCCCA CATTCATATTGAACCATATTTGCATCAGTTGATGCCGTCAATTATCACCTGCATGGTTGC GAAAAGGCTTGGGCATAGGCTTTCAGACAACCATTGGGAGCTTAGAGACTTCTCTGCTAA TTTGGTTGGTTCAGTATGTCGAAGGTTTGGTCATGCGTATCACAACATCCAAACCCGGGT GACAAGGACGTTGGTCCAGGGATTTCTTGATCCTCAGAAATCATTGACACAACACTATGG TGCGATTCAAGGGATATCTGCATTGGGGCCCAGTGCAATTAGGCTTCTGCTTTTGCCCAA CCTCGAGACATACATGCAGCTTTTAGAGCCGGAATTACAACTTGATAAGCAGAAAAATGA GATGAAAAGAAAGGAAGCATGGCGTGTTTATGGTGCCCTGCTGTGTGCTGCAGGAAAATG CTTATATGATCGGCTCAAGTTGTTTCCTAATTTGCTTTCTCCATCAACACGGCCTCTTTT GAGGAGTAATAAGAGAGTCGTGACTAACAACCCAAATAAACGGAAGTCTAGTACAGATCT CTCCACATCCCAGCCACCTCTGAAGAAGATGACAACAGATGGTGCGATGAATTCTATGAC TTCAGCTCCCATGCCAGGAACCATGGATGGCTTCTCCACCCAATTACCCAACCCTAGCAT GACGCAAACTTCATCCTCTGGGCAATTGGTGGAAAGCACCGCATCAGGTGTGATTCGGAG GGATCAGGGAAGCAACCACACGCAAAGAGTTTCCACAGTGCTGAGGCTAGCCTGGAAGGA GGACCAAAATGCTGGGCATCTGTTGAGTTCATTGTACGAGGTATTCGGTGAAGCCATCTT CTCCTTTGTTCAACCACCAGAGATATCGTTCTTTTTGTAGGAAGCAAATGCATAGTGTTC AGAGCTATGTAATATGCATTGTACCATTAGGCTGGTCTTGTGGAATTCTTGAAACTGAAA TTGACGTCTAGGAATCTTGTAGTGATCTCTGATGCTAGATTTAATCGCTTGGTGACTTGC TGCTGCAATATTTTATGTGCTGATTTCTTGAAGTTTT