Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0508500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:17798266:17799004:1 gene:Os01g0508500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRR Repressor Homologue 2 description:Conserved hypothetical protein. (Os01t0508500-01)
Sequence

ATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGACGACTTCTCGGCCG
TCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAA
GAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTCGGGCCCTGAGAGCC
ATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTAGCGGTGGCGGTGGC
GGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGGCGTTCGAGATGGCG
GTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCGAGGCGGCGACGACC
AAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGAACGCAGCTGCAGAG
GAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCATCGTCGCTGACGGG
CCTGGTAAGTCGACGACGATGCCCGACTCGAATTGA

Peptide Sequence

PEP ID

Os01t0508500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:17798266:17799004:1 gene:Os01g0508500 transcript:Os01t0508500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRR Repressor Homologue 2 description:Conserved hypothetical protein. (Os01t0508500-01)
Sequence

MEARLSTGEKTKKMATTSRPSSPLPPEEETAAETTTSEEEEQQQMERFYALVANVRALRA
MFKEAALPSCREDDVSGGGGGEQRQKRPRAAPWRPAFEMAVFECGGGGGTTTDDIEAATT
KGQDGNCKKGKRSEANAAAEEDKGEVIEGKPVAIAIVADGPGKSTTMPDSN

Transcript Sequence

Transcript ID

Os01t0508500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:17798266:17799004:1 gene:Os01g0508500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRR Repressor Homologue 2 description:Conserved hypothetical protein. (Os01t0508500-01)
Sequence

CCAACTACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGAT
GGCGACGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGAC
GACGACGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAA
CGTTCGGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGA
CGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCG
GCCGGCGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGA
CATCGAGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGA
GGCGAACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCAT
CGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGACGATGCCCGACTCGAATTGACGGCC
GGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATA
TCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGA
ATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTG
ACCAGATGAATTAATCAGG