Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0507900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:17746363:17752009:1 gene:Os01g0507900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 3 description:Similar to NClpP3 (ATP-dependent Clp protease proteolytic subunit ClpP3). (Os01t0507900-01)
Sequence	ATGGAGGCAGCGGCAGCCATGGCGGCCCTCCCCGCTTCTCCCTGCTCATCCTCCTCGTCC CCGTCGTCCCTTTTCCTCGCTCCCAACCCGTGCTGCTGGAAGGCGGCGCCAAGAGCTACG GTCCGCGCATCGGCGTCGGCGGCACGGCGGACGCTCTCCTCCGCGTGGGAACTTCCCGGG CCGTCGGCGGCTCGGCCTGCGGCAAGGAAGCCGCGCCTCGAGGAGCTGGACACCACCAAC ATGCTCCTTCGCCAGCGCATCGTCTTCCTCGGCTCCCCGGTGGATGATATGAGTGCTGAT CTTATCATCAGCCAACTCTTGCTGCTGGATGCTGAGGATAAAACTAAGGACATCAAATTG TTTATTAACTCACCTGGAGGCTCCATAACAGCAGGAATGGGAGTTTATGATGCCATGAAA TTTTGCAAGGCTGATATATCAACTGTCTGCTTTGGACTGGCGGCTTCCATGGGTGCATTT TTGCTAGCTGCTGGGACAAAGGGGAAGAGATTTTGCATGCCTAATGCGAGAATTATGATC CATCAACCATCAGGGGGTGCTGGTGGGAAGGTCACAGAGATGGGATTACAGATACGAGAG ATGATGTATGAGAAGATAAAGATCAACAAAATACTGTCAAGAATCACCGGGAAGCCTGAA GAGCAGATTGATGAGGATACAAAGTTTGACTATTTCATGAGTCCTTGGGAAGCCAAGGAT TATGGCATAGTTGACAGCGTTATAGATGAAGGGAAGCCGGGGTTGGTTGCTCCTTTGGCA GGAGCTGTGCCACCTCCAAAATCGCGTGTGTGGTACTTATGGAATGCTTCAGGACCAACT AGAAAAATCATGAAAAATCTACCTTCAGAGGAGAAGCTTATTCAAAATGGTAATGGCAGT GCAAGTGGAGACGATGGGAAGTTCAAGGAGATCTCAACAGCTTGA

Peptide Sequence

PEP ID	Os01t0507900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:17746363:17752009:1 gene:Os01g0507900 transcript:Os01t0507900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 3 description:Similar to NClpP3 (ATP-dependent Clp protease proteolytic subunit ClpP3). (Os01t0507900-01)
Sequence	MEAAAAMAALPASPCSSSSSPSSLFLAPNPCCWKAAPRATVRASASAARRTLSSAWELPG PSAARPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKL FINSPGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMI HQPSGGAGGKVTEMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKD YGIVDSVIDEGKPGLVAPLAGAVPPPKSRVWYLWNASGPTRKIMKNLPSEEKLIQNGNGS ASGDDGKFKEISTA

Transcript Sequence

Transcript ID	Os01t0507900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17746363:17752009:1 gene:Os01g0507900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHLOROPLAST PROTEASE 3 description:Similar to NClpP3 (ATP-dependent Clp protease proteolytic subunit ClpP3). (Os01t0507900-01)
Sequence	GTTCCTTCTCCAAACCCCTGCGCAGGATAACACACACTAGCAGGCAGCAGCAGCAGAAGC AGCCGCGAGCCAAGAAATGGAGGCAGCGGCAGCCATGGCGGCCCTCCCCGCTTCTCCCTG CTCATCCTCCTCGTCCCCGTCGTCCCTTTTCCTCGCTCCCAACCCGTGCTGCTGGAAGGC GGCGCCAAGAGCTACGGTCCGCGCATCGGCGTCGGCGGCACGGCGGACGCTCTCCTCCGC GTGGGAACTTCCCGGGCCGTCGGCGGCTCGGCCTGCGGCAAGGAAGCCGCGCCTCGAGGA GCTGGACACCACCAACATGCTCCTTCGCCAGCGCATCGTCTTCCTCGGCTCCCCGGTGGA TGATATGAGTGCTGATCTTATCATCAGCCAACTCTTGCTGCTGGATGCTGAGGATAAAAC TAAGGACATCAAATTGTTTATTAACTCACCTGGAGGCTCCATAACAGCAGGAATGGGAGT TTATGATGCCATGAAATTTTGCAAGGCTGATATATCAACTGTCTGCTTTGGACTGGCGGC TTCCATGGGTGCATTTTTGCTAGCTGCTGGGACAAAGGGGAAGAGATTTTGCATGCCTAA TGCGAGAATTATGATCCATCAACCATCAGGGGGTGCTGGTGGGAAGGTCACAGAGATGGG ATTACAGATACGAGAGATGATGTATGAGAAGATAAAGATCAACAAAATACTGTCAAGAAT CACCGGGAAGCCTGAAGAGCAGATTGATGAGGATACAAAGTTTGACTATTTCATGAGTCC TTGGGAAGCCAAGGATTATGGCATAGTTGACAGCGTTATAGATGAAGGGAAGCCGGGGTT GGTTGCTCCTTTGGCAGGAGCTGTGCCACCTCCAAAATCGCGTGTGTGGTACTTATGGAA TGCTTCAGGACCAACTAGAAAAATCATGAAAAATCTACCTTCAGAGGAGAAGCTTATTCA AAATGGTAATGGCAGTGCAAGTGGAGACGATGGGAAGTTCAAGGAGATCTCAACAGCTTG AGGTTATTACACATTGTGAAGCTTAATGTAGTCTGGCAGTAGTAGAAAAAGAATGTCAAG TAGCTGTAGCGCTCCTTAATTTTATGGACTGCAAGAACACGTTCTTCCAATGCAATAACT CATGGCGATTTCCAGTGTACATTGCTTTCATTCTGCCATTATGTTGGCTGAATTATTATT GTTCTTGCCAATTGCCATACTTAAAAAGAAAGAGAGAAAACCCAGCAAGTTATATT