Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0507700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:17741064:17742255:1 gene:Os01g0507700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0507700-01)
Sequence

ATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCCTGACAGAGACCAAGGAAGCCCTC
AAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACATCAAGGTGAAGATGGACTGCGAG
GGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGATGCGAGGGGTGACGAGCGTGGCG
GTGAACCCGAAGCAGAGCCGGTGCACGGTGACCGGGTACGTGGAGGCGAGCAAGGTGCTG
GAGCGCGTGAAGAGCACCGGGAAGGCGGCGGAGATGTGGCCCTACGTCCCGTACACCATG
ACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGAAGGCCCCCGCCGGCTTCGTCCGC
GGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCGAGGTCCGCTACATGACCATGTTC
AGCGACGAGAACGTCGACTCCTGCTCCATCATGTAA

Peptide Sequence

PEP ID

Os01t0507700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:17741064:17742255:1 gene:Os01g0507700 transcript:Os01t0507700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0507700-01)
Sequence

MGVLDSLSDMCSLTETKEALKLRKKRPLQTVNIKVKMDCEGCERRVKNAVKSMRGVTSVA
VNPKQSRCTVTGYVEASKVLERVKSTGKAAEMWPYVPYTMTTYPYVGGAYDKKAPAGFVR
GNPAAMADPSAPEVRYMTMFSDENVDSCSIM

Transcript Sequence

Transcript ID

Os01t0507700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:17741064:17742255:1 gene:Os01g0507700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0507700-01)
Sequence

CTGCACCCACGAGCTATACCAAGTACTCTCTTTCTCACTCGATTGATTCAAGCAGCAAAT
AATTAGCCTAGCTTACTCTTTCCATAGCTAGCTAGCTTGTTGCGAGCAAGATCAGGTTGC
CGGTGCAGTAACAGAGAGCAACCATGGGTGTATTGGACAGCCTCTCTGATATGTGCAGCC
TGACAGAGACCAAGGAAGCCCTCAAGCTAAGGAAGAAGCGGCCACTGCAGACGGTGAACA
TCAAGGTGAAGATGGACTGCGAGGGGTGCGAGAGGAGGGTGAAGAACGCGGTGAAGTCGA
TGCGAGGGGTGACGAGCGTGGCGGTGAACCCGAAGCAGAGCCGGTGCACGGTGACCGGGT
ACGTGGAGGCGAGCAAGGTGCTGGAGCGCGTGAAGAGCACCGGGAAGGCGGCGGAGATGT
GGCCCTACGTCCCGTACACCATGACCACCTACCCGTACGTCGGCGGCGCCTACGACAAGA
AGGCCCCCGCCGGCTTCGTCCGCGGCAACCCCGCCGCCATGGCCGACCCCTCCGCCCCCG
AGGTCCGCTACATGACCATGTTCAGCGACGAGAACGTCGACTCCTGCTCCATCATGTAAA
ACCAATAATCCATATATATACTACAACTCCGGCGACTTCTCCGGCCGGCCGGCAACATGC
TTGCTTAATTAGCTAGCTTGCTTGGTTGATGTGTACTACTGCGTTAAGCCTGCATAGAGA
TGAGGTGTCTAGCTACTGTGTATATTATGGCCATATGTTATGTAGTACTACGTGCTTTGT
TTTGGATTATTACTAAAATAGTTGCATAAAGAGAGTGAAAGCTAGAGCTGTGGCTACGTG
TTCTGAATTGTGATTACGTGTACGAACTAGAAACGACACGTCTGTTGTCGATTGAATTGG
TCTTTTTTGGAGCGGTAGCTAGGCCGGGTGAAGGGGCGGGGTTAATCAATCAATTGTTTG
GTTGAACCGCTAGGTAAGCTCTCTATGATGATATGAATAAAAAATCCCTGTCAGTGTCAT
GT