Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0506200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:17612391:17626954:-1 gene:Os01g0506200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0506200-01)
Sequence	ATGAGCAGCGAGGCCGGCGGCGCTGCGGCGAGCTCTGCCTCCGCGCCCCCGCCGCCGCGG AGGACGCCCCTGGAGAGGACCGCGGACGCGGCGGAGGAGTTGTATCGCCTCCGCGACACC TTCTTCCCCCGAGACCCCGTCGAGAAGGCCGCGGCCCTCCGCGCCCTCGCCGACGACGCC CTCGCCGTCCTCGACTCCCTCCCGCCAGAGCAAAGGAAAACACCGCAACAACGTGCTGTT TATGAATTCTTGAGGGGAAAAATATTGGATGTTTTCCCTGATTATCATAAGGAGGCTGAA GATCATTTATCCAAAGCAGTAAAGTTGAATCCATCTCTTGTAGATGCATGGCTGTGTTTG GGTAACTGCATATGGAAGAAAGGGGACCTGGATTCAGCAATGAACTGCTTTTCATTAGCA TTAAGCAAGGGGGCAGACAAGAAAATACTATGCCAGCTCTCAATGCTTGAAAGAAGTATG GCTCAAGGTAGTGAAGGCCAAGCACAGCTAGTGGAAGAGAGCATTAAGCATGCAAAAGAA GCTGTAATGCTTGACATCAGAGATGGAAATTCTTGGTATAATCTGGGTAATGCATATCTG ACAAGCTTTTTCGTGAGTGGATCCTGGGATCACATGAAGCTTCATCATTCAGTCAAAGCC TATCAAAATGCTGAAAAGGATGAGACTACGAAATGTAATCCAGACCTCTACTATAATTGT GCCACAGCTGACAAATACCTAGAGAACTATGAAAGAGCACTTCGTGGATTTGAAGCTGCA GCTTTAAAAGATCCTGGTCTTGGTGCTGATACAGAAGTTCAGAAGATCATCAGTCTCCTT GATAAGCTAGATAGTGCAATGAAGGGACAATTACGATCCAAGAGATTAGCATCATCAGTG TCTTCTTTGAGTGAAGTCAACATAAAATCATCTCACAAGAAAGCAACCATAGGCATCCTA TCAGAGGGTTTGAACAAGACAGTTGCTGTGTTGGGGAAAGTCATTCTTTTGATAAGACAC GACAACATTGCTCCAATGTATTATTTAACATGCGACTTGGATCAGTCTTATTTCATACTC TCAGTCTATGGTCTACGGAATGAAGCAATTAAAGAAGGTGATCGAGTGGCATTGTTGGAT CCTTACTACAGAATTCTGGATATATCTTGGAAAGAACAGCGCTATCAGTTCAAATCAATC CGTGTGGACTTTCCAGAACAGATTCTTGTTAATGAAAAAGCTCCACCACCTCATCATGTT GTACGAGCTTCAATCCATGCACACAATAAACCATGA

Peptide Sequence

PEP ID	Os01t0506200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:17612391:17626954:-1 gene:Os01g0506200 transcript:Os01t0506200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0506200-01)
Sequence	MSSEAGGAAASSASAPPPPRRTPLERTADAAEELYRLRDTFFPRDPVEKAAALRALADDA LAVLDSLPPEQRKTPQQRAVYEFLRGKILDVFPDYHKEAEDHLSKAVKLNPSLVDAWLCL GNCIWKKGDLDSAMNCFSLALSKGADKKILCQLSMLERSMAQGSEGQAQLVEESIKHAKE AVMLDIRDGNSWYNLGNAYLTSFFVSGSWDHMKLHHSVKAYQNAEKDETTKCNPDLYYNC ATADKYLENYERALRGFEAAALKDPGLGADTEVQKIISLLDKLDSAMKGQLRSKRLASSV SSLSEVNIKSSHKKATIGILSEGLNKTVAVLGKVILLIRHDNIAPMYYLTCDLDQSYFIL SVYGLRNEAIKEGDRVALLDPYYRILDISWKEQRYQFKSIRVDFPEQILVNEKAPPPHHV VRASIHAHNKP

Transcript Sequence

Transcript ID	Os01t0506200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17612391:17626954:-1 gene:Os01g0506200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os01t0506200-01)
Sequence	GCTTTCCGCCGGCGCCGATCTCCATCCTACTAGCGGAGGTGGCGCCGGCGTTCTCCTGCT CCCGCCGCATCATCGCTCACCGGTGAGCATCCTAATCCATCCCATCCGGCCTCGGCCTCG GCCTCGAATTTCGTCTCCTCGCCCGCCGCTTTGTGCCGAATCCCCATCCTGCGAGCAGAG GTGGCGCCCGGCGTCTGAATATTTTGCTCCTTCCTCCTACCCCGTTTCAAGCCTTTGCGG CCCTTGCGCCTCTCCCCTTGCCGGCCGGCCCCGCTCAGTCGGTTGCCTCGGACTCAGATC CCACTCGCATCGCCATCCTAGAAACCGATGAGCAGCGAGGCCGGCGGCGCTGCGGCGAGC TCTGCCTCCGCGCCCCCGCCGCCGCGGAGGACGCCCCTGGAGAGGACCGCGGACGCGGCG GAGGAGTTGTATCGCCTCCGCGACACCTTCTTCCCCCGAGACCCCGTCGAGAAGGCCGCG GCCCTCCGCGCCCTCGCCGACGACGCCCTCGCCGTCCTCGACTCCCTCCCGCCAGAGCAA AGGAAAACACCGCAACAACGTGCTGTTTATGAATTCTTGAGGGGAAAAATATTGGATGTT TTCCCTGATTATCATAAGGAGGCTGAAGATCATTTATCCAAAGCAGTAAAGTTGAATCCA TCTCTTGTAGATGCATGGCTGTGTTTGGGTAACTGCATATGGAAGAAAGGGGACCTGGAT TCAGCAATGAACTGCTTTTCATTAGCATTAAGCAAGGGGGCAGACAAGAAAATACTATGC CAGCTCTCAATGCTTGAAAGAAGTATGGCTCAAGGTAGTGAAGGCCAAGCACAGCTAGTG GAAGAGAGCATTAAGCATGCAAAAGAAGCTGTAATGCTTGACATCAGAGATGGAAATTCT TGGTATAATCTGGGTAATGCATATCTGACAAGCTTTTTCGTGAGTGGATCCTGGGATCAC ATGAAGCTTCATCATTCAGTCAAAGCCTATCAAAATGCTGAAAAGGATGAGACTACGAAA TGTAATCCAGACCTCTACTATAATTGTGCCACAGCTGACAAATACCTAGAGAACTATGAA AGAGCACTTCGTGGATTTGAAGCTGCAGCTTTAAAAGATCCTGGTCTTGGTGCTGATACA GAAGTTCAGAAGATCATCAGTCTCCTTGATAAGCTAGATAGTGCAATGAAGGGACAATTA CGATCCAAGAGATTAGCATCATCAGTGTCTTCTTTGAGTGAAGTCAACATAAAATCATCT CACAAGAAAGCAACCATAGGCATCCTATCAGAGGGTTTGAACAAGACAGTTGCTGTGTTG GGGAAAGTCATTCTTTTGATAAGACACGACAACATTGCTCCAATGTATTATTTAACATGC GACTTGGATCAGTCTTATTTCATACTCTCAGTCTATGGTCTACGGAATGAAGCAATTAAA GAAGGTGATCGAGTGGCATTGTTGGATCCTTACTACAGAATTCTGGATATATCTTGGAAA GAACAGCGCTATCAGTTCAAATCAATCCGTGTGGACTTTCCAGAACAGATTCTTGTTAAT GAAAAAGCTCCACCACCTCATCATGTTGTACGAGCTTCAATCCATGCACACAATAAACCA TGACTCTGGGCAAGAAAACATTTTTTGTGTTGAGAGATTACATCAAGGGAGTGGAGGGAC TGAGGATGGGAAGAGCTGTAAGGAAATGATCATATCACAATTTTGTGCAATTTTCTACTT TGTGGTTCTACATTGTGGCCAGTTTTGTCAGCTGGTCATGTGATTTGATCCACACAGGGA TGCTTTCGTTGGGGTTCAGCTGTTCAAGGATGGTTTGATTTTTCCCTTTGCTTAGTGTGC TATCCATTAACGGGGATGTACTGTGTTAGTTCGATGTAAATTTGACAGTACTTGTACCCT GTGTAATCATATAGGATTGTCGGCTGCTCGATGACTGTTGCTTAGTGTTATGAGAAGATG GACTGTAAGTTCGGCCATTCGATGAATGGGGCATTTGTAAAGCTTGTTGCAG