Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0505400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:17560761:17564889:1 gene:Os01g0505400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-01);Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-02)
Sequence	ATGGCGACCGACACCGCCGCTCCAGCTGCCATGAAGGTCGACGGCAGCGCCCTCGCCGGG CGCGCGCTGGCCGCGGCCGGGGCGCGGCACATGTTCGGGGTGGTGGGCATCCCGGTCACC TCCCTCGCGTCCCGCGCCGCGGCCGCCGGTGTCCGCTTCCTCGCCTTCCGCAACGAGCAG TCCGCGGGCTACGCCGCCGCCGCCTACGGCTTCCTCACCGGCTCCCCCGGCCTGCTCCTC ACCGTCTCCGGCCCCGGCTGCGTCCACGGCCTCGCGGGCCTCTCCCACGCCACCGCCAAC GCCTGGCCGCTCCTCATGGTCTCCGGCTCCTGCTCCCAGCCAGACGCCGGCAGGGGCGAC TTCCAGGAGCTCGACCAGATCGCCGCCACCAAGCCTTTCATCAAGATCGCCGTCAAGGCA ACCACCATCGCCGACATCCCTCGCCTCGTCTTCCAGGCCCTCGCCGCCACCGTCTCCGGC CGCCCCGGCGGCTGCTACCTCGACATCCCATCCGACGTCCTCCACCAAACCCTCACGGAA TCGGAGGCCGCCGCCCTCATCGACGCTGCCGCCGCCGATTCGGCCAAATCCGATTCTTCT CCACCCAAGCACAAGTCCCTGGACGAGGGAATCGAGAAGGCGGCGGAGCTGCTCCGCCGC GCGGAGCGGCCTCTGGTTGTGTTTGGGAAGGGCGCGGCGTATTCTCGCGCTGAGGACGCC ATCTGGAAGCTGGTGGATACCACGGGCATCCCCTTCCTCCCGACGCCGATGGGAAAGGGT GTTGTGCCCGACACGCACCCACTGTCGGCCACCGCGGCGCGCTCTCTCGCCATTGGGCAA TGTGATGTGGCATTAGTCGTTGGTGCTCGGCTTAATTGGTTGCTTCACTTCGGTGAGCCA CCCAAATGGTCCAAAGATGTGAAATTCATACTTGTGGATGTCTGCGAGGAGGAGATTGAG CTCCGGAAGCCGCATGTTGGAATTGTTGGGGATGCCAAGAGAGTTGTGGAGCTTATCAAT AGGGAGATCAAGGACCAGCCATTCTGCTTGGCACCATCACACCCATGGGTTGAAGCAATC ACCAAGAAGGCCAGGGACAATGTTCTTAAGATGGAGGCTCAGCTTGCCAAGGATGTTGTG CCATTCAATTTCCTGACACCTTTGCGGATTATCCGGGATGCTATACTTGCTGAGGGAAAC CCTGCTCCTGTAGTGGTCTCAGAAGGGGCAAACACCATGGATGTCGGCAGGGCAGTGCTT GTGCAGAACGAGCCGAGGACTAGACTGGATGCAGGTACATGGGGGACAATGGGAGTTGGA TTGGGATTCTGTGTTGCAGCTGCAGTTGCTGAGCCTGATCGACTTGTGGTTGCTGTGGAG GGTGATTCTGGATTTGGATTCAGTGCAATGGAGGTTGAGGTATGA

Peptide Sequence

PEP ID	Os01t0505400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:17560761:17564889:1 gene:Os01g0505400 transcript:Os01t0505400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-01);Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-02)
Sequence	MATDTAAPAAMKVDGSALAGRALAAAGARHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQ SAGYAAAAYGFLTGSPGLLLTVSGPGCVHGLAGLSHATANAWPLLMVSGSCSQPDAGRGD FQELDQIAATKPFIKIAVKATTIADIPRLVFQALAATVSGRPGGCYLDIPSDVLHQTLTE SEAAALIDAAAADSAKSDSSPPKHKSLDEGIEKAAELLRRAERPLVVFGKGAAYSRAEDA IWKLVDTTGIPFLPTPMGKGVVPDTHPLSATAARSLAIGQCDVALVVGARLNWLLHFGEP PKWSKDVKFILVDVCEEEIELRKPHVGIVGDAKRVVELINREIKDQPFCLAPSHPWVEAI TKKARDNVLKMEAQLAKDVVPFNFLTPLRIIRDAILAEGNPAPVVVSEGANTMDVGRAVL VQNEPRTRLDAGTWGTMGVGLGFCVAAAVAEPDRLVVAVEGDSGFGFSAMEVEV

Transcript Sequence

Transcript ID	Os01t0505400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17560761:17564889:1 gene:Os01g0505400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-01);Similar to 2-hydroxyphytanoyl-CoA lyase. (Os01t0505400-02)
Sequence	GTCTTCCAACTTCCTAGCAGCAGGTTCATCTGCCTGCCTCCAGCTTCAACTGCGGCGTCG CCGCGTCGCCGTCGCAGTCGCCGTCGCGGCGACTCTCCGGCTCTCCCCCGACCGCCCCCG CTATAAGCCTGAGCTGCTCAGGCGACGGCACGCAACCCCAGCCAGGCAGCCAGCCTAGGG AGAGGGAATGGCGACCGACACCGCCGCTCCAGCTGCCATGAAGGTCGACGGCAGCGCCCT CGCCGGGCGCGCGCTGGCCGCGGCCGGGGCGCGGCACATGTTCGGGGTGGTGGGCATCCC GGTCACCTCCCTCGCGTCCCGCGCCGCGGCCGCCGGTGTCCGCTTCCTCGCCTTCCGCAA CGAGCAGTCCGCGGGCTACGCCGCCGCCGCCTACGGCTTCCTCACCGGCTCCCCCGGCCT GCTCCTCACCGTCTCCGGCCCCGGCTGCGTCCACGGCCTCGCGGGCCTCTCCCACGCCAC CGCCAACGCCTGGCCGCTCCTCATGGTCTCCGGCTCCTGCTCCCAGCCAGACGCCGGCAG GGGCGACTTCCAGGAGCTCGACCAGATCGCCGCCACCAAGCCTTTCATCAAGATCGCCGT CAAGGCAACCACCATCGCCGACATCCCTCGCCTCGTCTTCCAGGCCCTCGCCGCCACCGT CTCCGGCCGCCCCGGCGGCTGCTACCTCGACATCCCATCCGACGTCCTCCACCAAACCCT CACGGAATCGGAGGCCGCCGCCCTCATCGACGCTGCCGCCGCCGATTCGGCCAAATCCGA TTCTTCTCCACCCAAGCACAAGTCCCTGGACGAGGGAATCGAGAAGGCGGCGGAGCTGCT CCGCCGCGCGGAGCGGCCTCTGGTTGTGTTTGGGAAGGGCGCGGCGTATTCTCGCGCTGA GGACGCCATCTGGAAGCTGGTGGATACCACGGGCATCCCCTTCCTCCCGACGCCGATGGG AAAGGGTGTTGTGCCCGACACGCACCCACTGTCGGCCACCGCGGCGCGCTCTCTCGCCAT TGGGCAATGTGATGTGGCATTAGTCGTTGGTGCTCGGCTTAATTGGTTGCTTCACTTCGG TGAGCCACCCAAATGGTCCAAAGATGTGAAATTCATACTTGTGGATGTCTGCGAGGAGGA GATTGAGCTCCGGAAGCCGCATGTTGGAATTGTTGGGGATGCCAAGAGAGTTGTGGAGCT TATCAATAGGGAGATCAAGGACCAGCCATTCTGCTTGGCACCATCACACCCATGGGTTGA AGCAATCACCAAGAAGGCCAGGGACAATGTTCTTAAGATGGAGGCTCAGCTTGCCAAGGA TGTTGTGCCATTCAATTTCCTGACACCTTTGCGGATTATCCGGGATGCTATACTTGCTGA GGGAAACCCTGCTCCTGTAGTGGTCTCAGAAGGGGCAAACACCATGGATGTCGGCAGGGC AGTGCTTGTGCAGAACGAGCCGAGGACTAGACTGGATGCAGGTACATGGGGGACAATGGG AGTTGGATTGGGATTCTGTGTTGCAGCTGCAGTTGCTGAGCCTGATCGACTTGTGGTTGC TGTGGAGGGTGATTCTGGATTTGGATTCAGTGCAATGGAGGTTGAGGTATGAATAATGGC ATTCCTGTTCCACTTTGACAAATAAAACATCTACCACAATTCACAATTTATTTGATTTAA TTTGCACAATGCTATTATTAGCACCTTTGTTGGCTCATATTCTTTACTTTTGCTCCTGCC ATGCTGTTGTGCGGTGCAAGTGATATTCATTTTTGCTCATGCAAAAAGTAGTTGATTAAG CATGTCATGATATCAAAACTATTCAGACAATTCTATATAGTAATAACTACCTGTCATAAT ATTAGTATAACTATGAGACTGCCAACTACAATGAGCTAACAAATCCCCTTAAGTTATGAA ATTGGGATATCATGCAAATAAAATCCTCTAACAAATAGATAAAGATGACATGGCATTTAA ATAGCGTTCCCAAGAATCATGTATCATTTATAGCTGTGCTGGTTGTATTATTTCTTTTAG ATAATGAAAATGTTTTTACATCACCGGCTTCTGCCATAAGGCACACAGCCAACGCACTGG TTGTTTGTATATATTTAAATAAAAAGGTAGAAGATCCTTTATCAACTCAAATTGATCACT ATTGTACCATTGGTCCCTAATTTGTCATATGTCAACTCAAATTGATCACTATTGTAGACC GTTTCTTTGACATATGACAAATTAGATGTACATGGATAAAAGAGTTGAGGATGGTCCAAG GTGAAACAATGGCAAGGTTACCTGGTCCAAAGTGAAAACATTGGTTAAAGGGTGATCCAA AGTGAAACATCGGTAAAAAATGTGGCCCAAAGTGAAATTTACTCGTATTTTTTATATGTT GATCGTAGTTGTACCTTCGTAATATCGAAGTAAAAAGAATCAGAAATTCAGGATACCCTT AGTCCTAAATTATACATTTTACAGGGAACCTAAAATTACAGCATTTTACGAGAGGCCTAT CTGGAAATATTGCCAATTGGCAACCATGCAATTCTGTATTTATGTTAACCTTGTTGTTTC TTACATTAATGCACATAATTTTCTTGAAACTAATAATGCTCATTTTTTGTCATTATAACA AAATGATATGCTTCAATTTATTAATTAAAATCCAGCTGTAAGGTAAGGCCATTCCAAGCT TTATGTTCTTCTCAATGCTATATCTGATGTGGGAGTTGTATAGCTTGTTTAATAATAAAT TTATAAGATGACATGATTTAGTATATAGTTGTGTTTAACCCATTCAATGAATTATTAGTG GAGCACTCCTAAATTGTAGGGTGTAGGACTCATGCTCAATAATTCGCTTCGAGTATTAAT AACTGTTTGAGAATTTGTGGTTTGCTACTACTACTTGATAGTTGGATATCAATTGGCCGA TGTGTGGGTCAAGCAACAATGGAACTGTGCAAATTAAATTATGTGATATAGTGTGATTAA TATTTATGTGCCAAATATTGTCAATTGTTCCTCTTGTTATGATTAGATCAGCCATTTTAA TTTTTTTGCCTCTTAAGTGGTAGGGAGGTATACTCCTCCGAAAGATGGGAGAAAACCTCA CTGCTTCTGTGCCTGCTAACTAGTTGCACTTTTAATAAAAAGAGAGTAGTACATAGCTAT TCCCTCTGGTTTTAAATATATGGCACCATTGACATTTTCCTTAAACTTCGACCAACAATA GTACACTAGTTATTCAGTTACTTAGTTAAGTGAAAAGAGTACCACTAGACCTGTCATCAA TAGTTACACTAGTTATTCAGTTACTTAGTTAAGTGAAAAGAGTACCACTAGACCTGTCAT CAATAGTACTTTAAACGTGCCGTGTATGTTTGTCTATTTGCATATTTCTTGAAAAGACAG TCAAACGAATTAAAGAAAACAATGGTGTCATATATTATCGGCGGTACTATGTTCTATTTT CACAATATTGTACTAAAGGTACCTTAACGTTTATACTTTGTTGTTCACTTTGCAGACATT GGTAAGGTACCAGCTGCCTGTTGTTGTAATTGTCTTCAACAATAATGGAGTTTATGGCGG TGATCGGAGAAGCCCTGATGAGATAACCGGACCGTACAAAGATGATCCTGCCCCAACCTC TTTCGTTCCAGCTGCTGGTTACCATAAAATGATGGAAGCTTTTGGAGGAAAAGGTTATCT TGTTGAGACACCAGATGAGCTAAAATCCGCCCTTTCAGAGTCGTTTCGTGCCAGGAAGCC AGCGGTGATAAATGTTATCATTGATCCTTATGCTGGTGCAGAGAGCGGTAGAATGCAGCA TAAGAACTGAAGGTGTTTGTATCATACCAGAACGCAGGTCCCAGTTAATAAGCAATGTCC TATTGAAATTAAAACGGACACCCATGGAAGAACATCTTATATCACTGTCCCTGAAATAAG AAAGATCCTGGGTAGTACTCCGTACTTAATGGCATGTGAGATATCGAATTCAAGCTGTCT GTTTTGTAATGTACCGTACCCGTGTTACCGTGTACAGTATACTAAAGAAAAAATGTTTGT GGTTAGTAATTCACTCATGATGTCGATGCATTTATAAGTTTGTACCTGT