Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0503400-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:17454023:17464971:-1 gene:Os01g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 6 description:Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-01);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-02);Similar to OsNramp1 (Integral membrane protein). (Os01t0503400-03);Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-04);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-05)
Sequence	ATGGAGGAGGGGGCGAAGATCGGGAGGGAGCACGAGCAGCAGCAGCAGCAGCACGGGAGG GTGAACGGTAGCGGGAGGGTCGCGGCCGTCGGTGGCGGCAGCGGCGGTGGCGGGGACGAG ATTGAGATTGAGGTCGCCGCAGCCGCAGGGGCTTCGCCGTCGCGGCAACACGGCGGTCTG CACGGCGATGTCCAGGCACCCACTTGGAAGAGATTTCTTGCACATGTTGGTCCTGGATTT GTTATCTCCATCGCATACCTTGATCCTAGTAACTTGCAGACTGATTTGGTAGCTGGATCC AGCCACAGATATTCGTTGCTATGGGTACTCCTATTTGGGTTCATATTTGTGTTGACTGTA CAATCATTGGCAGCAAATTTGGGTATCATTACAGGAAGGCACCTCGCTGAGTTGTGCATG GGTGAATATCCAAAGTATGTCAAGTACTGCCTATGGTTACTAGCAGAGCTTGGTGTTATT GCTGCCACTATACCAGGAGTTTTAGGAACTGCTTTAGCCTACAACATGCTACTCCACATC CCTTTCTGGGCCGGTGTCCTAGCATGTGGGGCATGCACTTTCCTAATTCTCGGGTTACAA GGATATGGGGCTCGGAAAATGGAGTTCACTATATCAGTTCTTATGTTGGTGATGGCTACT TGCTTTTTTATGGAACTTGGCAAAGTTAATCCTCCTGCTGGTGGGGTAATTGAGGGGCTT TTTATCCCAAGGCCCAAAGGGGATTATTCTACTTCAGATGCGGTTGCTATGTTTGGTTCT CTTGTTGTTCCGCATAATCTCTTCCTACATTCTTCTTTGGTGCTAACGAGAAAAATGCCA TATACTTCCAAAGGACGCAAGGATGCTTCTACATTCTTCTTGCTTGAGAATGCATTAGCT CTGTTCATTGCACTACTTGTAAATGTCGCTATTGTATCAATATCTGGTACTATATGTGCC AACAATCTCTCATTTGCCGACACAAGCACGTGCAGCAGTCTAACATTGAATTCAACTTAT GTACTACTCAAGAATATTTTGGGAAAATCAAGTTCAACTGTGTATGGTGTGGCCTTATTA GTTTCTGGACAGAGCTGCATGGTGGCTACGAGTTATGCTGGCCAATACATCATGCAGGGC TTCTCCGGAATGAGAAAGTGCATCATATATCTTGTTGCTCCTTGTTTCACCTTATTACCT AGTTTGATAATTTGCAGCATTGGTGGTACTTTACGAGTGCATCGAATTATCAACATAGCT GCGATTGTACTATCATTTGTGCTGCCGTTTGCTCTAATTCCACTCATTAAATTCAGTAGC AGCTGCACAAATATAGGACCATACAAGAATGCAACATCTATTATCCGAATCGCGTGGATA CTGTCATTGGTGATTATTGGAATCAATATTTATTTCTTCTGTACTAGCTTTGTCGCTTGG CTTGTTCATAGCGACCTTCCAAGGGTTGTTAATGCAATAATTAGCAGCCTTGTTTTCCCT TTCATGGCAGCCTATATTGCTGCTCTGATCTACTTGGCTTTCAGAAAAGTTAACCTTTCA GATCCATTCCCCACCAATTCAGTTTCTGGTGAGATTGAAGTTCAACACATACAAATACAA GAGAAGCAGGAAGATTTAGGTGTACATTTATGA

Peptide Sequence

PEP ID	Os01t0503400-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:17454023:17464971:-1 gene:Os01g0503400 transcript:Os01t0503400-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 6 description:Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-01);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-02);Similar to OsNramp1 (Integral membrane protein). (Os01t0503400-03);Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-04);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-05)
Sequence	MEEGAKIGREHEQQQQQHGRVNGSGRVAAVGGGSGGGGDEIEIEVAAAAGASPSRQHGGL HGDVQAPTWKRFLAHVGPGFVISIAYLDPSNLQTDLVAGSSHRYSLLWVLLFGFIFVLTV QSLAANLGIITGRHLAELCMGEYPKYVKYCLWLLAELGVIAATIPGVLGTALAYNMLLHI PFWAGVLACGACTFLILGLQGYGARKMEFTISVLMLVMATCFFMELGKVNPPAGGVIEGL FIPRPKGDYSTSDAVAMFGSLVVPHNLFLHSSLVLTRKMPYTSKGRKDASTFFLLENALA LFIALLVNVAIVSISGTICANNLSFADTSTCSSLTLNSTYVLLKNILGKSSSTVYGVALL VSGQSCMVATSYAGQYIMQGFSGMRKCIIYLVAPCFTLLPSLIICSIGGTLRVHRIINIA AIVLSFVLPFALIPLIKFSSSCTNIGPYKNATSIIRIAWILSLVIIGINIYFFCTSFVAW LVHSDLPRVVNAIISSLVFPFMAAYIAALIYLAFRKVNLSDPFPTNSVSGEIEVQHIQIQ EKQEDLGVHL

Transcript Sequence

Transcript ID	Os01t0503400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17454023:17464971:-1 gene:Os01g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 6 description:Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-01);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-02);Similar to OsNramp1 (Integral membrane protein). (Os01t0503400-03);Similar to (Rice Genome Annotation Project) metal transporter Nramp6. (Os01t0503400-04);Similar to cDNA clone:J013164K10, full insert sequence. (Os01t0503400-05)
Sequence	GGGTTTTGAGAGAGGGAATGGGTTAGGTGAGTGCTGTTCCTGCCCCCAAGCCGACGACTT TCGTCCTCGATGCTTGCGTCGCATCTCGAATACACCGAGTGTACGTTGGGAGAAGTACAG ATATGCAGAGGGATCGCGGAGTTGACCCGTATTGCATGCAGGCAGCTGCTGCTTTTCTTG CGGCAACCGGAGCTGGTGCTGGCCTCGCCAGGTTCAGGTTAATGGTCAACCACCACCACC ACTAGTTGCGCTACTGAGACAGAGCAATGGAGGAGGGGGCGAAGATCGGGAGGGAGCACG AGCAGCAGCAGCAGCAGCACGGGAGGGTGAACGGTAGCGGGAGGGTCGCGGCCGTCGGTG GCGGCAGCGGCGGTGGCGGGGACGAGATTGAGATTGAGGTCGCCGCAGCCGCAGGGGCTT CGCCGTCGCGGCAACACGGCGGTCTGCACGGCGATGTCCAGGCACCCACTTGGAAGAGAT TTCTTGCACATGTTGGTCCTGGATTTGTTATCTCCATCGCATACCTTGATCCTAGTAACT TGCAGACTGATTTGGTAGCTGGATCCAGCCACAGATATTCGTTGCTATGGGTACTCCTAT TTGGGTTCATATTTGTGTTGACTGTACAATCATTGGCAGCAAATTTGGGTATCATTACAG GAAGGCACCTCGCTGAGTTGTGCATGGGTGAATATCCAAAGTATGTCAAGTACTGCCTAT GGTTACTAGCAGAGCTTGGTGTTATTGCTGCCACTATACCAGGAGTTTTAGGAACTGCTT TAGCCTACAACATGCTACTCCACATCCCTTTCTGGGCCGGTGTCCTAGCATGTGGGGCAT GCACTTTCCTAATTCTCGGGTTACAAGGATATGGGGCTCGGAAAATGGAGTTCACTATAT CAGTTCTTATGTTGGTGATGGCTACTTGCTTTTTTATGGAACTTGGCAAAGTTAATCCTC CTGCTGGTGGGGTAATTGAGGGGCTTTTTATCCCAAGGCCCAAAGGGGATTATTCTACTT CAGATGCGGTTGCTATGTTTGGTTCTCTTGTTGTTCCGCATAATCTCTTCCTACATTCTT CTTTGGTGCTAACGAGAAAAATGCCATATACTTCCAAAGGACGCAAGGATGCTTCTACAT TCTTCTTGCTTGAGAATGCATTAGCTCTGTTCATTGCACTACTTGTAAATGTCGCTATTG TATCAATATCTGGTACTATATGTGCCAACAATCTCTCATTTGCCGACACAAGCACGTGCA GCAGTCTAACATTGAATTCAACTTATGTACTACTCAAGAATATTTTGGGAAAATCAAGTT CAACTGTGTATGGTGTGGCCTTATTAGTTTCTGGACAGAGCTGCATGGTGGCTACGAGTT ATGCTGGCCAATACATCATGCAGGGCTTCTCCGGAATGAGAAAGTGCATCATATATCTTG TTGCTCCTTGTTTCACCTTATTACCTAGTTTGATAATTTGCAGCATTGGTGGTACTTTAC GAGTGCATCGAATTATCAACATAGCTGCGATTGTACTATCATTTGTGCTGCCGTTTGCTC TAATTCCACTCATTAAATTCAGTAGCAGCTGCACAAATATAGGACCATACAAGAATGCAA CATCTATTATCCGAATCGCGTGGATACTGTCATTGGTGATTATTGGAATCAATATTTATT TCTTCTGTACTAGCTTTGTCGCTTGGCTTGTTCATAGCGACCTTCCAAGGGTTGTTAATG CAATAATTAGCAGCCTTGTTTTCCCTTTCATGGCAGCCTATATTGCTGCTCTGATCTACT TGGCTTTCAGAAAAGTTAACCTTTCAGATCCATTCCCCACCAATTCAGTTTCTGGTGAGA TTGAAGTTCAACACATACAAATACAAGAGAAGCAGGAAGATTTAGGTGTACATTTATGAA TAGAAAAGGTAACACCGTCCATGTGATTCTTCTCTGGACATGCATCAAGTATTTAGCATA TACTGAAATTGGGACTTCAATTCATTTGAAGATGTATATAGCTCAAAGCCTCGAAATCAT TTAGAAACATTCTAGCTAGCAACCGTATGTTCAGTACAATTAGGCATATAGCAAAACTTT TCTAGTCATAGGTGTTGTCCTTTCGTTAATTGCTCATCAAATAAAATTCTCTTCCACGCC ATAGATTCAAATGTGTGACGAACTTTACTATAGGTATATGGCAAAATGCATGGAACAATG GTCAGATGCCCTGTTTTGCAAATATGTTTTTTAACATAATGGAATTCATTCTGGCCTTTA CTTCGTAGAAGTTGC