Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0501800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:17349338:17350785:1 gene:Os01g0501800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Similar to Photosystem II oxygen-evolving complex protein 1 (Fragment). (Os01t0501800-01)
Sequence	ATGGCAGCATCGCTCCAAGCCGCGGCCACCCTGATGCAGCCGGCCAAGCTCGGCGGCCGG GCCTCCTCCGCCGCGCTGCCATCGCGCCCGTCTTCGCACGTCGCCAGGGCGTTCGGCGTC GACACCGGTGCCGCCGGCAGGATCACGTGCTCCCTGCAGTCCGACATCCGGGAGGTCGCC AACAAGTGCGCCGATGCCGCCAAGCTCGCCGGCTTCGCCCTCGCCACCTCAGCTCTGCTC GTCTCGGGCGCCAGCGCGGAGGGCGTGCCGAGGAGGCTTACCTTCGACGAGATTCAGAGT AAGACGTACATGGAGGTGAAGGGAACCGGCACGGCGAACCAGTGCCCGACGGTGGAGGGC GGCGTCGACTCCTTCGCCTTCAAGGCCGGCAAGTACAACATGAAGAAGTTCTGCCTGGAG CCGACGTCCTTCACCGTTAAGGCGGAGGGCGTGGCCAAGAACGCGCCACCCGAGTTCCAG AAGACCAAGCTCATGACCCGCCTGACCTACACCCTCGACGAGATCGAGGGCCCGCTCGAG GTCAGCTCCGACGGAACCATCAAGTTCGAGGAGAAGGACGGAATCGACTACGCCGCCGTC ACCGTGCAGCTGCCGGGAGGCGAGCGCGTGCCGTTCCTCTTCACCATCAAGAATCTGGTC GCCACCGGCAAGCCGGAGAGCTTCGGCGGGCCCTTCCTCGTGCCCAGCTACCGTGGTTCG TCCTTCCTCGACCCAAAGGGCCGCGGTGGCTCTACCGGCTACGACAACGCTGTGGCGCTC CCCGCCGGAGGCAGAGGAGACGAGGAGGAGCTCGCTAAGGAGAACGTCAAGAACGCCTCG TCGTCGACGGGCAACATCACGTTGAGCGTCACCAAGAGCAAGCCAGAGACCGGCGAGGTG ATTGGCGTCTTCGAGAGCGTGCAGCCGTCGGACACAGACCTCGGCGCCAAGGTGCCCAAG GATGTCAAGATCCAAGGGGTGTGGTACGCGCAGCTCGAGTAG

Peptide Sequence

PEP ID	Os01t0501800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:17349338:17350785:1 gene:Os01g0501800 transcript:Os01t0501800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Similar to Photosystem II oxygen-evolving complex protein 1 (Fragment). (Os01t0501800-01)
Sequence	MAASLQAAATLMQPAKLGGRASSAALPSRPSSHVARAFGVDTGAAGRITCSLQSDIREVA NKCADAAKLAGFALATSALLVSGASAEGVPRRLTFDEIQSKTYMEVKGTGTANQCPTVEG GVDSFAFKAGKYNMKKFCLEPTSFTVKAEGVAKNAPPEFQKTKLMTRLTYTLDEIEGPLE VSSDGTIKFEEKDGIDYAAVTVQLPGGERVPFLFTIKNLVATGKPESFGGPFLVPSYRGS SFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEV IGVFESVQPSDTDLGAKVPKDVKIQGVWYAQLE

Transcript Sequence

Transcript ID	Os01t0501800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:17349338:17350785:1 gene:Os01g0501800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM II SUBUNIT description:Similar to Photosystem II oxygen-evolving complex protein 1 (Fragment). (Os01t0501800-01)
Sequence	CTTCACGATACAACCCACACGGACACGGCCACACCACCCACCAACTGAGAGCTGAGCAGG CGAGCGAGCGGACATGGCAGCATCGCTCCAAGCCGCGGCCACCCTGATGCAGCCGGCCAA GCTCGGCGGCCGGGCCTCCTCCGCCGCGCTGCCATCGCGCCCGTCTTCGCACGTCGCCAG GGCGTTCGGCGTCGACACCGGTGCCGCCGGCAGGATCACGTGCTCCCTGCAGTCCGACAT CCGGGAGGTCGCCAACAAGTGCGCCGATGCCGCCAAGCTCGCCGGCTTCGCCCTCGCCAC CTCAGCTCTGCTCGTCTCGGGCGCCAGCGCGGAGGGCGTGCCGAGGAGGCTTACCTTCGA CGAGATTCAGAGTAAGACGTACATGGAGGTGAAGGGAACCGGCACGGCGAACCAGTGCCC GACGGTGGAGGGCGGCGTCGACTCCTTCGCCTTCAAGGCCGGCAAGTACAACATGAAGAA GTTCTGCCTGGAGCCGACGTCCTTCACCGTTAAGGCGGAGGGCGTGGCCAAGAACGCGCC ACCCGAGTTCCAGAAGACCAAGCTCATGACCCGCCTGACCTACACCCTCGACGAGATCGA GGGCCCGCTCGAGGTCAGCTCCGACGGAACCATCAAGTTCGAGGAGAAGGACGGAATCGA CTACGCCGCCGTCACCGTGCAGCTGCCGGGAGGCGAGCGCGTGCCGTTCCTCTTCACCAT CAAGAATCTGGTCGCCACCGGCAAGCCGGAGAGCTTCGGCGGGCCCTTCCTCGTGCCCAG CTACCGTGGTTCGTCCTTCCTCGACCCAAAGGGCCGCGGTGGCTCTACCGGCTACGACAA CGCTGTGGCGCTCCCCGCCGGAGGCAGAGGAGACGAGGAGGAGCTCGCTAAGGAGAACGT CAAGAACGCCTCGTCGTCGACGGGCAACATCACGTTGAGCGTCACCAAGAGCAAGCCAGA GACCGGCGAGGTGATTGGCGTCTTCGAGAGCGTGCAGCCGTCGGACACAGACCTCGGCGC CAAGGTGCCCAAGGATGTCAAGATCCAAGGGGTGTGGTACGCGCAGCTCGAGTAGGGAAT GAACAAATGTTTTGTGCGTGGCCGGGTTGATATATCGATACATGGAGAGAGGGAAGGAAG GCTGCAATGTGTGTATCTAGTAATGCAAACTCGATCGGGCTGTTGATGGTTTTAATTTTT AGCTTTTGTTTCTTCCTCTGTTCTCGTGAACTGATGATCATATCCCCCGATGATGTTATT TGCATTTCGACAAGCGGAGAGGACATTGTACGATACATATATGTGCCTATCTTCACGAAC ATTTGCCTTCC