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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0501000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:17309384:17325760:-1 gene:Os01g0501000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED9, Mediator 9_1 description:Conserved hypothetical protein. (Os01t0501000-01)
Sequence

ATGGATCAGCACCACGTGCAGCAGCAGCAGTATGTTGACCCTTATCGGACAATGGTGCTG
TCACCACAGCCTGACCACCTCAATGCCCTCCAGTACAATCACCAGCAGCAGCCACAGCCA
CCACCGCAAGCAACTCCACCACCACCACAACATCACCATGCCTCACTCGCCTCCCACTTC
CATCTCCTCCATTTGACGACAAGATTAGCTGATGCTATTGGAAAGGGCACAAGGGATCAA
AATTCTGATGCACTGGTTGAAGATTTGACCAGTCAATTTGCTAGGTGTCAACAACTATTA
AACTCCATATCGGGAACACTAAGCTCGAAATCTATAACAGTTGAAGGACAAAGGAAAAGT
TTGGAAGAAACGCAGCAGCTCCTTGATCAGAGGAAGGATTTGATCACAAAGTACAGAAGC
TCCGTTGAAGACCTGCTCAAGGGGGATACAAGAAGATAG

Peptide Sequence

PEP ID

Os01t0501000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:17309384:17325760:-1 gene:Os01g0501000 transcript:Os01t0501000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED9, Mediator 9_1 description:Conserved hypothetical protein. (Os01t0501000-01)
Sequence

MDQHHVQQQQYVDPYRTMVLSPQPDHLNALQYNHQQQPQPPPQATPPPPQHHHASLASHF
HLLHLTTRLADAIGKGTRDQNSDALVEDLTSQFARCQQLLNSISGTLSSKSITVEGQRKS
LEETQQLLDQRKDLITKYRSSVEDLLKGDTRR

Transcript Sequence

Transcript ID

Os01t0501000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:17309384:17325760:-1 gene:Os01g0501000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Mediator complex protein OsMED9, Mediator 9_1 description:Conserved hypothetical protein. (Os01t0501000-01)
Sequence

AGGGCCTTACCCAGTTACCCTCGCCATTTTTGTGCGTATCCCTCCTCGTCAGTTTGCCCT
TGTCCACCGCCTCCGCCTCCGCCTCCGCCGATCCCCATCCATCCCGCGAGCGAGCAGGGA
CGCCGTCGTTAGTCCTGCTGCTTCCGCCGCATCCATCCTGGTGAGCACATCCTCCGCACC
GCCGCCTGCGCCGATCCCCATCCATCGTGTGTAATTGTTCCTAAGAAGAAGGAAATCGTC
GTTCAGTGCAGTGCGGTGCCTCGAGGATATTTCCCTGTTCCCTCGGTGTTGACTCCTCGT
GAATTCGCCCGCCGCCTGTGCCGCCGCCGATCACCATCCATCCCACGGGCAAGCAGGGGC
GCCGTCACCGCATCCTGAAGGGAAGAGGAAGATGGATCAGCACCACGTGCAGCAGCAGCA
GTATGTTGACCCTTATCGGACAATGGTGCTGTCACCACAGCCTGACCACCTCAATGCCCT
CCAGTACAATCACCAGCAGCAGCCACAGCCACCACCGCAAGCAACTCCACCACCACCACA
ACATCACCATGCCTCACTCGCCTCCCACTTCCATCTCCTCCATTTGACGACAAGATTAGC
TGATGCTATTGGAAAGGGCACAAGGGATCAAAATTCTGATGCACTGGTTGAAGATTTGAC
CAGTCAATTTGCTAGGTGTCAACAACTATTAAACTCCATATCGGGAACACTAAGCTCGAA
ATCTATAACAGTTGAAGGACAAAGGAAAAGTTTGGAAGAAACGCAGCAGCTCCTTGATCA
GAGGAAGGATTTGATCACAAAGTACAGAAGCTCCGTTGAAGACCTGCTCAAGGGGGATAC
AAGAAGATAGTAACATGGTGACTGTATGGTAGAGTTGGAATGTTAAAGAGGAGCTCGTTG
CTACATGTGATCGTTTTCTAATCAGCATCGGCTACTTTTGTAATCGAGGTAGCCTTGAAG
TTGGTCTGGCTTAGGAACATACTTTCAGTTTGTGCTATCTCATATTGTTGGTGGGTAATG
GGTTCATGGGTTTCTGAGACGAGCATGCTGCCCAGCTTATATTGAAGGTTTACTGAGGAC
CAGTCATTTTGTTTAATGGG