Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0390400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:16480398:16494334:1 gene:Os01g0390400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)
Sequence	ATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCC ACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACC ACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCA CCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACTGACGGC CTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGT GCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTC GTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCC ACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAAC GCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAA CGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAA GACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGG ATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGG TTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTC AAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAA TGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTC CCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAAC TTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAAC AAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACA ATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGT CTTCGGTTCCAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGA CAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGT GTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTA AACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAA ATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACAT GTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGAT GTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAAT ATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATA AATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCT CCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAG CCAAATTACATTGCATGTTAA

Peptide Sequence

PEP ID	Os01t0390400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:16480398:16494334:1 gene:Os01g0390400 transcript:Os01t0390400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)
Sequence	MAPPLLDLPSHCLLPRLRRPTSGRLLLHLRLKPLSSSSYTTTTTTTTSSSTSSSRAPQVP PSLHGPSLRRGRRLPGETDGLLSFARIFDLAALRVPAAACAPLERRLRGHLLNWPRVRNV VRQPGDDGGLLFPVPHPSLATPSSLPTAVARREKLAREFNARGFVQFPNLAKMSRPPARK RKGKKDEGGGEAAATARDTKDKVYVVEVIGERKEEHGDEWMGLVGEEGFGRITWRGGPTR LLLLDENYANKRVDDLPEAVKVVLDHETNKDGSSSYELVQCQLTLFYNYWPMNEILEEIL PEGIIVPTGFETVGHIAHLNLRDDHLPYKKLIAQVVLDKNKPKIQTVVNKIDAIQNDYRT MQLEVLAGIDSLVTTVIESGLRFQVDLSTVYWNSRLSTERQRLVDHVFKNSDVVCDVFSG VGPIAISAARKVKYVYANDLNPTAVEYLERNIVLNKLERKIEVFNMDARRFISSIYSSQH VHPVTQVVMNLPNDAAEFLDVFRGISWNHHLAVPSCVMPNIHVYGFSKAEDPEYDFHERI NLTLGENVSDVEMHRVRLVAPGKWMLCASFTLPVSVAFAKPNYIAC

Transcript Sequence

Transcript ID	Os01t0390400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:16480398:16494334:1 gene:Os01g0390400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Met-10+ like family protein. (Os01t0390400-01);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-02);Nucleic acid-binding OB-fold domain containing protein. (Os01t0390400-03)
Sequence	ACTGTAGACGGAGGCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCG CCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGC CGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACC ACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTC CATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCC TTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTC GAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAA CCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCC TCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGC TTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGG AAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTA TATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTG GTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTC CTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTG TTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTG ACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGA ATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGAT GACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAG ATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTT GAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTC CAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTT GTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCA ATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACT GCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTT TTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCA GTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGA GGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTG TATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACG CTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAA TGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTAC ATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGT GAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCT ACTACATGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCG TTTGTAGAAATTGCTTCAATAATCCAAAAGGATTTTACGATGAGAAAGTATAAAAAAAAA GCTATGGGTGAAGCGCCAGGGACATTTAACTATTTGTCATCTATGTGTTAATGACATATA GATCCGAGTGGTAAATTAATTGAAGAGTGTCAAATAGTTAATTTTTTCCATTTGCCCCAT ACACAGTAGTGGATGAGTTGGCTCCTCTGTTCCGATGGAATAGCTAAAATTATCAAGAAC CTACTGGTGCCTCTCTCTCTCTCTAGATAGTTCTTTTTTCTCCTTGGGCAGTGGCCTATC TAGCATTTAGCATTTAGATGGTCTAACTTACATAATTTTTTATTTTTGTTAAAGTGAGAT AATATACAGTTAGTTCATCATGACATAAGGATATGATTTGCTAATTGTTACCCTTGCAAA CAAATGTATTTTTTCTCTTCCTAAGAATAGTTTTTCTTTCTTTTTAACACATGTATCTTT GGCTACGTATTTCTAGGTGATCCTGGAACCACCCACAAGCTTGGAATAATATGGTTGCAA ATTTTATGTAT