Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0384300-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:16086670:16088900:1 gene:Os01g0384300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase. (Os01t0384300-00)
Sequence	ATGTCCTCCTCCCTCCCCTCTCCCCTCCTCTTCCTCCTCCTCCTCCTCCCCTTCCCCGCC GCGGTTCGTTCCCAGCCGGCGGCGGCCCCCGCGCCGCAGCAGCAATGCCCGCTCAACTTC ACCGCGCTCCGGCCCTTCCTGGCCCAGCCGCTCCCGCCCGACGACTCCGCGCGCTGCCTC CTCGCCGTGCAGTCCGTTCGCCTCCTCCTCGCGCTCCACCTCGCCGCCACAGGATCCTTC GTCCTCCCGGCTAACTCCTCCTGCCTCCCGCCGCTCCGCGCCGAGCTCCCCTTCGCGCTC CCGTCGCCCTCCGCCTGCGGCCTCCAGGGGCTCGACGCGCTCCTCGCGTCCCCGGGGTGC GCCAACGTTTCCACTCTCGGGGACTTCGACGCCGCCGTGCCGCCGTCCTCGCGGGCGGAC ATGAACGCCAGCTGCAACCGGGACCTCACCCCGGTCCCCGACTGTACCTCCTGCACCACC TCGCTCAGCAAGGCCGCGGCGGCCTACCTCCTCCCGGGCTCCCCCAACGACGGTGGGAAC AACGTCACCGGCTGCGTCCAGTACCCCTTCATCTACGCCGGCGCCGCCGCCAGCCCGCGC GGCGCCGACGACCCAGCCACGGCCAACTGCCTCTACCTCCTCAAGGTGAACTCTGCTTCC AAGGCCAGCTCCAGCGTCCCTGGTTGGGTCTACGGCGTCGTGTTTGGCTGCGTCGCCATG GTTCTGCTCGTTGCCGCGGCGGCTGCCTCTTGGTTCCTGGTGCGGCGGCGGCGGAGGCGG GCCGCCGCCGCGGCGCTGGCCAAGGCCGCGGCCGACAGCAGGAGCAAGCGCTCGCAGGCG ATGGAGTCAATCAGCGCGAGCACCACGCTAGTCCAGTTCACCTACGACGAGATCAAGGCG GCCACTGGGGGATTCGCAAGGGAGAGCATCATTGGCCGCGGTGGGTTCGGCAATGTGTAC AAGGGCGTGCTCCCGGACGGCGCGGAGGTGGCCGTGAAGCGGTTCAAGAACTGCTCCGCG GCTGGGGATGCCGCGTTCGCGCACGAGGTGGAGGTCGTGGCCAGCGTCCGCCATGTCAAC CTGGTCGCCATCCGTGGGTACTGCATCGCTACCACTGAGAGAGAAGGCCACCAGCGAATG ATTGTGTGTGACCTGATGCACAATGGCAGCCTGCACGATCACCTGTTCGGTGCCGGGGAA TGCCAGATGACGTGGCCGGTGAGGCAGAGGATTGCCATAGGGATGGCGCGCGGCCTGGCC TATCTGCACCGCGGGGCGCAGCCCGCCATCATTCACAGGGATATCAAAGCGAGCAATATC TTGCTTGATGACGACTTTGAGGCCATGGTGGCTGATTTCGGATTGGCCAAGTTTGCACCG GAAGGGATGACGCATGTGAGCACAAGGGTTGCTGGCACGCTGGGTTATGTCGCTCCAGAG TATGCACTGTATGGCCAATTGACTGAGAAGAGTGATGTCTATAGCTTCGGAGTTGTACTT CTTGAGCTTCTAAGTGGAAAGAGGGCATTTATCTCTCTTGGTGAAGGCCAGAACTTTGTG CTCAGTGAATGGGCTTGGTTATTGGTCCGGAGGGGGAAGACAGTGGATGTGATCCAAGAA GGAATGGTTGAGCCTGGTCCTACTGAGGTAATGGAGAAGTATGTACTTGTCGCAGCACTC TGCACGCATCCTCAGCTGCACGCTAGGCCAACAATGGATCAAGTGGTGAAGATACTAGAG GCAGATTCAGCGTCAGGTCCTTTAATTATTCCGGAGCGGCCTCTTCCGGTAGTCGCAAAC CTGGCTGAGATTGAGAGATCAGCCAGTAGCAGTGGCTCAGGTCAGCTGTTTAGTCCCTCT GGTTTCCGGTCTTTTACTCATATAAATGAAGATGCTGCTTTGGAGTCTCCTAAAGAAGAA TGA

Peptide Sequence

PEP ID	Os01t0384300-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:16086670:16088900:1 gene:Os01g0384300 transcript:Os01t0384300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase. (Os01t0384300-00)
Sequence	MSSSLPSPLLFLLLLLPFPAAVRSQPAAAPAPQQQCPLNFTALRPFLAQPLPPDDSARCL LAVQSVRLLLALHLAATGSFVLPANSSCLPPLRAELPFALPSPSACGLQGLDALLASPGC ANVSTLGDFDAAVPPSSRADMNASCNRDLTPVPDCTSCTTSLSKAAAAYLLPGSPNDGGN NVTGCVQYPFIYAGAAASPRGADDPATANCLYLLKVNSASKASSSVPGWVYGVVFGCVAM VLLVAAAAASWFLVRRRRRRAAAAALAKAAADSRSKRSQAMESISASTTLVQFTYDEIKA ATGGFARESIIGRGGFGNVYKGVLPDGAEVAVKRFKNCSAAGDAAFAHEVEVVASVRHVN LVAIRGYCIATTEREGHQRMIVCDLMHNGSLHDHLFGAGECQMTWPVRQRIAIGMARGLA YLHRGAQPAIIHRDIKASNILLDDDFEAMVADFGLAKFAPEGMTHVSTRVAGTLGYVAPE YALYGQLTEKSDVYSFGVVLLELLSGKRAFISLGEGQNFVLSEWAWLLVRRGKTVDVIQE GMVEPGPTEVMEKYVLVAALCTHPQLHARPTMDQVVKILEADSASGPLIIPERPLPVVAN LAEIERSASSSGSGQLFSPSGFRSFTHINEDAALESPKEE

Transcript Sequence

Transcript ID	Os01t0384300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:16086670:16088900:1 gene:Os01g0384300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase. (Os01t0384300-00)
Sequence	TCCTCCCCCTTCCCCAACCCACACCCACACACACTTCCAAGCTAGCCGTCTCCAACAACC CTCCCCCCACCATCCTCCCCATGTCCTCCTCCCTCCCCTCTCCCCTCCTCTTCCTCCTCC TCCTCCTCCCCTTCCCCGCCGCGGTTCGTTCCCAGCCGGCGGCGGCCCCCGCGCCGCAGC AGCAATGCCCGCTCAACTTCACCGCGCTCCGGCCCTTCCTGGCCCAGCCGCTCCCGCCCG ACGACTCCGCGCGCTGCCTCCTCGCCGTGCAGTCCGTTCGCCTCCTCCTCGCGCTCCACC TCGCCGCCACAGGATCCTTCGTCCTCCCGGCTAACTCCTCCTGCCTCCCGCCGCTCCGCG CCGAGCTCCCCTTCGCGCTCCCGTCGCCCTCCGCCTGCGGCCTCCAGGGGCTCGACGCGC TCCTCGCGTCCCCGGGGTGCGCCAACGTTTCCACTCTCGGGGACTTCGACGCCGCCGTGC CGCCGTCCTCGCGGGCGGACATGAACGCCAGCTGCAACCGGGACCTCACCCCGGTCCCCG ACTGTACCTCCTGCACCACCTCGCTCAGCAAGGCCGCGGCGGCCTACCTCCTCCCGGGCT CCCCCAACGACGGTGGGAACAACGTCACCGGCTGCGTCCAGTACCCCTTCATCTACGCCG GCGCCGCCGCCAGCCCGCGCGGCGCCGACGACCCAGCCACGGCCAACTGCCTCTACCTCC TCAAGGTGAACTCTGCTTCCAAGGCCAGCTCCAGCGTCCCTGGTTGGGTCTACGGCGTCG TGTTTGGCTGCGTCGCCATGGTTCTGCTCGTTGCCGCGGCGGCTGCCTCTTGGTTCCTGG TGCGGCGGCGGCGGAGGCGGGCCGCCGCCGCGGCGCTGGCCAAGGCCGCGGCCGACAGCA GGAGCAAGCGCTCGCAGGCGATGGAGTCAATCAGCGCGAGCACCACGCTAGTCCAGTTCA CCTACGACGAGATCAAGGCGGCCACTGGGGGATTCGCAAGGGAGAGCATCATTGGCCGCG GTGGGTTCGGCAATGTGTACAAGGGCGTGCTCCCGGACGGCGCGGAGGTGGCCGTGAAGC GGTTCAAGAACTGCTCCGCGGCTGGGGATGCCGCGTTCGCGCACGAGGTGGAGGTCGTGG CCAGCGTCCGCCATGTCAACCTGGTCGCCATCCGTGGGTACTGCATCGCTACCACTGAGA GAGAAGGCCACCAGCGAATGATTGTGTGTGACCTGATGCACAATGGCAGCCTGCACGATC ACCTGTTCGGTGCCGGGGAATGCCAGATGACGTGGCCGGTGAGGCAGAGGATTGCCATAG GGATGGCGCGCGGCCTGGCCTATCTGCACCGCGGGGCGCAGCCCGCCATCATTCACAGGG ATATCAAAGCGAGCAATATCTTGCTTGATGACGACTTTGAGGCCATGGTGGCTGATTTCG GATTGGCCAAGTTTGCACCGGAAGGGATGACGCATGTGAGCACAAGGGTTGCTGGCACGC TGGGTTATGTCGCTCCAGAGTATGCACTGTATGGCCAATTGACTGAGAAGAGTGATGTCT ATAGCTTCGGAGTTGTACTTCTTGAGCTTCTAAGTGGAAAGAGGGCATTTATCTCTCTTG GTGAAGGCCAGAACTTTGTGCTCAGTGAATGGGCTTGGTTATTGGTCCGGAGGGGGAAGA CAGTGGATGTGATCCAAGAAGGAATGGTTGAGCCTGGTCCTACTGAGGTAATGGAGAAGT ATGTACTTGTCGCAGCACTCTGCACGCATCCTCAGCTGCACGCTAGGCCAACAATGGATC AAGTGGTGAAGATACTAGAGGCAGATTCAGCGTCAGGTCCTTTAATTATTCCGGAGCGGC CTCTTCCGGTAGTCGCAAACCTGGCTGAGATTGAGAGATCAGCCAGTAGCAGTGGCTCAG GTCAGCTGTTTAGTCCCTCTGGTTTCCGGTCTTTTACTCATATAAATGAAGATGCTGCTT TGGAGTCTCCTAAAGAAGAATGACACTTTTCTTAGCTGAGTAGAGAAAAGTTTATTTCTA GATTCTCTGTGTACCATATTTTTTTTGTTAGCTTGATTTCTCTTAATGGAATTACTCAAT TGTGTAGATAGAAATTGTACTTTTGCCCCCACCCAGGAAATGTAAGATTCTTTGGTGACA GTTGAATTCATTTAAAACATATCTGCTTTTTTATTTCTTTATCATATATTTGACATTTAA ATATCATTGAT