Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0383900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:16062035:16067655:1 gene:Os01g0383900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AvrPiz-t Interacting Protein 12 description:Peptidase S59, nucleoporin family protein. (Os01t0383900-01);Peptidase S59, nucleoporin family protein. (Os01t0383900-02)
Sequence	ATGATGAGCTCTTCTTCGTCCTGGTCTACCCCAAGCTTTGGGTTAGCCAGGGAATCCTCT TCATTGTTGTTTACACCTGGCCTTGTGCAACACATGGGTCCTAATCCATCGTCATCTTGG TCCACCCCTGCTCATCCAGTCTCTGATAGTCCCACGTTTTCTTTCCCCACGCCATTTTTC TGTGAGCCTGCGAAAGGCAGCAGGGTCTATGCTTATACCAAGACTGCTGATGATCTTCCT CATAAGCATACACTATCAATTTCTGCAATGCCAGCATACATAAGCAAATCCCATGAGGAG CTTCGACATGAAGATTATCAGAGAGGAGACAAAGGCGGTGATGGCCTGCAGAAAATTATG GTTAATTCAGCTCCTGTACCTCCCATGCCCATGTTATCATCTGTTGGAGCTCCAGTTAAT ATGATCAATTCAAGTCAACCTGCTTTCAGTTTGAAGTCCAAAACAAATTTCAGTACTCCA TTTTCACCAGCAGCAACTGCTGATCAACAATCTGCACAGCTACAGTTCTCAACACAAAAT CACTATTATACTTCCAACCCATTTTGGCCTGCCCCAATAGGATTGGTGCGACCATGTTCA TCAACAGGACTGCAATCTTCCACGCCAGGTCTAAACTGTACCGGCATCACATCATTTCCA TTCCTGCCCACAAAGCAACCGTCTGTGGGAACCCAATCATCAACTTTATTTCCTACCACT TTTGTGCATCCATCCGTGGAGTTGCAAAAGAATGCCTCCACCCACTGTGCTAGCTCACAG ACTGCTCCTTGTACGACACACGGAGGAATTCTATTCGGCACGGCTGCAAATACAGTCTCA TTAACTACATCATCTACTGAGCCAACCACATCATCCCTTGGTCCAACCTCATGCCCTGCT ACTCGACATGGAGATGCACCTTCTACTGGATTTGCATGTCAGGAAAATGTATTCAGCAAC TCAGCGGCATATACATCTACTATAAATGCGGATGTTCCCACGAATACCATAGATTTGCTA CTTCCAAATAACATCCGGCTGGTAAGGCTTAGATTTTCTTCAACAAATGATGGTAATGGA AGTGTTGCTTCAGAGGTTCATTGTCATCATGATGCTAAAACTTCAGAAACACCCATTTCT TTGTGCATATATCCTGGAGAGAACCAAGAGCTGATTATCAAATCAATGGTGCAGCCTGCT AAGAGTCACACTGGGAAACAATCTAGTCCAACTGGTGGTCATCCAGATGATCAAAGTGGT CGCAGCAAAGTATGCAACAGTGCTGCTGGTCTGCCATCGTCAGGACCTGGTGAGAATCAG AAGGGGAATAGCAGTGCTGGTCACAAGACACCAAAGTCTCCACTGGCTGCTCCTCGTTGC GAAGCGATAGCGGAGTCTGTACTGCCTCGCCTGTACAGCGCCGATTACTACACCGTGCCA TCTATTGTGGAGCTCGCCGTGGGAGAGAGGGACGAGCCAGGCTATTGCTCACATGTGAAG GGCTTCACGGTCGGCAGGCATGGCTATGGCAGCGTAAAGTTTGATGGAGAAACTGATTGG AGAAGGCTTGATATTGGATCCATCGTGGAGTTCAATGAGCGTGAGATTATTGTGTACAGA GATGTGAGCAATACGCCGCCTGTTGGGCAGGAACTCAACAAGCCTGCTGAAGTCACTCTT CTGAATGTCAAGTGCGTCGAACAGAAGAATGGGTTGCAGTTCACAGAGGGGCCGGCAGTT GATAGGTACAAGGAGATTTTGGTGCAGTGGACAAAGGACCATGGCGCAGAATTTGTGTCA TTTGACGCGGCCAAGGGAGAATGGAAGTTCAGGGTTAAGAATTTCAATATGTAG

Peptide Sequence

PEP ID	Os01t0383900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:16062035:16067655:1 gene:Os01g0383900 transcript:Os01t0383900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AvrPiz-t Interacting Protein 12 description:Peptidase S59, nucleoporin family protein. (Os01t0383900-01);Peptidase S59, nucleoporin family protein. (Os01t0383900-02)
Sequence	MMSSSSSWSTPSFGLARESSSLLFTPGLVQHMGPNPSSSWSTPAHPVSDSPTFSFPTPFF CEPAKGSRVYAYTKTADDLPHKHTLSISAMPAYISKSHEELRHEDYQRGDKGGDGLQKIM VNSAPVPPMPMLSSVGAPVNMINSSQPAFSLKSKTNFSTPFSPAATADQQSAQLQFSTQN HYYTSNPFWPAPIGLVRPCSSTGLQSSTPGLNCTGITSFPFLPTKQPSVGTQSSTLFPTT FVHPSVELQKNASTHCASSQTAPCTTHGGILFGTAANTVSLTTSSTEPTTSSLGPTSCPA TRHGDAPSTGFACQENVFSNSAAYTSTINADVPTNTIDLLLPNNIRLVRLRFSSTNDGNG SVASEVHCHHDAKTSETPISLCIYPGENQELIIKSMVQPAKSHTGKQSSPTGGHPDDQSG RSKVCNSAAGLPSSGPGENQKGNSSAGHKTPKSPLAAPRCEAIAESVLPRLYSADYYTVP SIVELAVGERDEPGYCSHVKGFTVGRHGYGSVKFDGETDWRRLDIGSIVEFNEREIIVYR DVSNTPPVGQELNKPAEVTLLNVKCVEQKNGLQFTEGPAVDRYKEILVQWTKDHGAEFVS FDAAKGEWKFRVKNFNM

Transcript Sequence

Transcript ID	Os01t0383900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:16062035:16067655:1 gene:Os01g0383900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AvrPiz-t Interacting Protein 12 description:Peptidase S59, nucleoporin family protein. (Os01t0383900-01);Peptidase S59, nucleoporin family protein. (Os01t0383900-02)
Sequence	GGCGCCGCCCCTCCCCTCTCGGTTAGCTGCTGCTCCTGCACCTGCTGCTGCTGCTACTGC CAATCTGCCATTCTCCCCCATTCGACCTCTCCCCCGTTTCCTCCGATCGACTCGCTTGCG CGCGGGGGAGGTGTGATCGATCGGTTCTCTCTCACCGCATTGTGATCGATCGTCTAGGTC GTACGGGCGCTCGATCTGCTTCGAATCCTCCATTTGCTATGATGAGCTCTTCTTCGTCCT GGTCTACCCCAAGCTTTGGGTTAGCCAGGGAATCCTCTTCATTGTTGTTTACACCTGGCC TTGTGCAACACATGGGTCCTAATCCATCGTCATCTTGGTCCACCCCTGCTCATCCAGTCT CTGATAGTCCCACGTTTTCTTTCCCCACGCCATTTTTCTGTGAGCCTGCGAAAGGCAGCA GGGTCTATGCTTATACCAAGACTGCTGATGATCTTCCTCATAAGCATACACTATCAATTT CTGCAATGCCAGCATACATAAGCAAATCCCATGAGGAGCTTCGACATGAAGATTATCAGA GAGGAGACAAAGGCGGTGATGGCCTGCAGAAAATTATGGTTAATTCAGCTCCTGTACCTC CCATGCCCATGTTATCATCTGTTGGAGCTCCAGTTAATATGATCAATTCAAGTCAACCTG CTTTCAGTTTGAAGTCCAAAACAAATTTCAGTACTCCATTTTCACCAGCAGCAACTGCTG ATCAACAATCTGCACAGCTACAGTTCTCAACACAAAATCACTATTATACTTCCAACCCAT TTTGGCCTGCCCCAATAGGATTGGTGCGACCATGTTCATCAACAGGACTGCAATCTTCCA CGCCAGGTCTAAACTGTACCGGCATCACATCATTTCCATTCCTGCCCACAAAGCAACCGT CTGTGGGAACCCAATCATCAACTTTATTTCCTACCACTTTTGTGCATCCATCCGTGGAGT TGCAAAAGAATGCCTCCACCCACTGTGCTAGCTCACAGACTGCTCCTTGTACGACACACG GAGGAATTCTATTCGGCACGGCTGCAAATACAGTCTCATTAACTACATCATCTACTGAGC CAACCACATCATCCCTTGGTCCAACCTCATGCCCTGCTACTCGACATGGAGATGCACCTT CTACTGGATTTGCATGTCAGGAAAATGTATTCAGCAACTCAGCGGCATATACATCTACTA TAAATGCGGATGTTCCCACGAATACCATAGATTTGCTACTTCCAAATAACATCCGGCTGG TAAGGCTTAGATTTTCTTCAACAAATGATGGTAATGGAAGTGTTGCTTCAGAGGTTCATT GTCATCATGATGCTAAAACTTCAGAAACACCCATTTCTTTGTGCATATATCCTGGAGAGA ACCAAGAGCTGATTATCAAATCAATGGTGCAGCCTGCTAAGAGTCACACTGGGAAACAAT CTAGTCCAACTGGTGGTCATCCAGATGATCAAAGTGGTCGCAGCAAAGTATGCAACAGTG CTGCTGGTCTGCCATCGTCAGGACCTGGTGAGAATCAGAAGGGGAATAGCAGTGCTGGTC ACAAGACACCAAAGTCTCCACTGGCTGCTCCTCGTTGCGAAGCGATAGCGGAGTCTGTAC TGCCTCGCCTGTACAGCGCCGATTACTACACCGTGCCATCTATTGTGGAGCTCGCCGTGG GAGAGAGGGACGAGCCAGGCTATTGCTCACATGTGAAGGGCTTCACGGTCGGCAGGCATG GCTATGGCAGCGTAAAGTTTGATGGAGAAACTGATTGGAGAAGGCTTGATATTGGATCCA TCGTGGAGTTCAATGAGCGTGAGATTATTGTGTACAGAGATGTGAGCAATACGCCGCCTG TTGGGCAGGAACTCAACAAGCCTGCTGAAGTCACTCTTCTGAATGTCAAGTGCGTCGAAC AGAAGAATGGGTTGCAGTTCACAGAGGGGCCGGCAGTTGATAGGTACAAGGAGATTTTGG TGCAGTGGACAAAGGACCATGGCGCAGAATTTGTGTCATTTGACGCGGCCAAGGGAGAAT GGAAGTTCAGGGTTAAGAATTTCAATATGTAGAGTCCTCTGAGAATCTATAATTCTCCTA TCAGTAGGCTCCTGTGTCTGGTAGAAGTAACAACATAGTAATCCTGTAAAAAATGTGTTC TTTTTGTAGTTCGGTCACTTGGTACGGATAGCTGGATACTTCTGGACGAAATAACTTTAG CTATAAAAACTGCCTTTGTTGCGT