Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0377700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:15644974:15647062:1 gene:Os01g0377700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NPL4 family protein. (Os01t0377700-01);NPL4 domain containing protein. (Os01t0377700-02)
Sequence	ATGATCCTCCGCATCCGCAGCCGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCC GCCGCCACCGTCGGCGACCTGCAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCG CTCCAGCGCCTCTCCCTCGACCCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTG CTCGCCGACCCGGCCGCCCCGCTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTAC CTCTCCTACCCGCCCGACGCCCGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCC GCCGGCTCCTTCGGCAAGAAGATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTC ACCCGCCAGGAGGCCCCGCTCTGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCC TTCCAGCTCCACGTCGCCGAGTCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTAC GGCCGCGTCGACGCCGACACCAAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAG GTCGGCACCGAGGACGTTGTCCAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGAC GCCATCGCCCACGGCCTCGGGATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGG AGGAAGACCAGCGACACTGGCGAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACC GAGCTGCAGGCGGAGGGCGGGATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTG GGGGATGATGGCTCCGGTGATGTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTG AAGCTGTTCAAGGATGGTGTGCTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTG TCCAAGATGCGGAAAGAGGTGGTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGAC TTCTTCCTGGTGCCTGTCAAGATCTCTGATCATCAGGTATTCTTATTCTTTCCTACTCTG TTGCATAGTATAATGAACTTACAGTTTACTAAATAA

Peptide Sequence

PEP ID	Os01t0377700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:15644974:15647062:1 gene:Os01g0377700 transcript:Os01t0377700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NPL4 family protein. (Os01t0377700-01);NPL4 domain containing protein. (Os01t0377700-02)
Sequence	MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRV TRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQ VGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLVFTQAVGRKTSDTGEYTMSNREVLQAT ELQAEGGIPEWVTAIVKLEVGDDGSGDVHFEAFQMSEICVKLFKDGVLETEIGDKDDPRL SKMRKEVVAGGKDTMEVDNDFFLVPVKISDHQVFLFFPTLLHSIMNLQFTK

Transcript Sequence

Transcript ID	Os01t0377700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:15644974:15647062:1 gene:Os01g0377700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NPL4 family protein. (Os01t0377700-01);NPL4 domain containing protein. (Os01t0377700-02)
Sequence	AAGCCAAGTACCGAGATCCCCAACCCAACCCAAGCCGCGATGATCCTCCGCATCCGCAGC CGCGACGGCACGGACCGCATCACCGTGCCGGACCCGGCCGCCGCCACCGTCGGCGACCTG CAGCGTCTCATCGCGGCGCGCGTCACCGTCCCCGTCCCGCTCCAGCGCCTCTCCCTCGAC CCGGCGCTCCTCCTCCCCTCCTCCGCCTCCGCCGCCCTGCTCGCCGACCCGGCCGCCCCG CTCTCCTCCCTCCGCCTCTCCAATGGCTCCTTCGTCTACCTCTCCTACCCGCCCGACGCC CGCTCCTCCCAGCCGCCTCCCCCCAAAGCCCTCTCCGCCGCCGGCTCCTTCGGCAAGAAG ATGACCATGGACGACCTCATCGCGCGCCAGATCCGCGTCACCCGCCAGGAGGCCCCGCTC TGCGCCGCCGCCTCCTTCGACCGCGACTCCGCCAACGCCTTCCAGCTCCACGTCGCCGAG TCGCTCGCCTTCGCTACCAAGCGCGCCGGCTTCCTCTACGGCCGCGTCGACGCCGACACC AAGGAGGTCTTCGTCGATTTCATCTACGAGCCGCCGCAGGTCGGCACCGAGGACGTTGTC CAGCTCATGCGGGACGCGCAGGAGGAGGCCCGCGTCGACGCCATCGCCCACGGCCTCGGG ATGCGCCGCGTCGGCCTGGTGTTCACGCAGGCAGTCGGGAGGAAGACCAGCGACACTGGC GAGTACACCATGTCCAACCGCGAGGTGCTTCAGGCCACCGAGCTGCAGGCGGAGGGCGGG ATCCCGGAGTGGGTCACCGCCATAGTCAAGCTCGAGGTGGGGGATGATGGCTCCGGTGAT GTGCACTTCGAGGCGTTCCAGATGAGTGAGATTTGTGTGAAGCTGTTCAAGGATGGTGTG CTGGAGACGGAGATTGGGGACAAAGACGATCCCCGCCTGTCCAAGATGCGGAAAGAGGTG GTGGCTGGGGGAAAGGATACTATGGAGGTGGACAATGACTTCTTCCTGGTGCCTGTCAAG ATCTCTGATCATCAGGTATTCTTATTCTTTCCTACTCTGTTGCATAGTATAATGAACTTA CAGTTTACTAAATAAGTTTGCTTCCTACAACATAGCAATATTAACACTTGACTGGGTAGC AGCATGTTTGAAACCTTGAATCATCAGGTGATCTGAGTGGGTGCTCGTTTTAGTAATTTG ATGTAAAACTGACAATGAAACAACATAATGGTCAGCGAACAAGGTAGATATGCCGCATGA ATTAGAAATAAAAATTTCCCAATACAAGAGAAGAATTAGAGCCTTTGTGTTATCCACTAA ATAGTAGAGTGCCTATTTGCATGCAAGCAATTAATTCATGACATATTTATTTTCTGCAAA GTCATTATGTTTCTGTTAATTTTTTGATTCAAACTTCGTAGAGGGCCTCCTGCACTGTCT TGAAAAACTGAATCTCTGGGTGTAAGGGCATGATATATGAGTTCTGTTCAGTGTTAGACT GTTAGTAAACAGCCATCCACAAATATTCATAATTCTAGTAATAATAGATCCACTTTTGAG AAGTAATTAACCACTATATAAGAAAAGGAGTATGTGTAGAAAAATTCAGGCATTTTGGCA CATTTATTGAAGACCTACTGATTTAAGTAACTGTTTCAAGAACGTAAAGATATAGTTACT CTTATGTTCCATAGAACTACAAGTTTTTAACTACTTGTTCAAACCACTTGCAGACACACA AAGGCCCTGTTCTATGACATGCAGCACACATTTTTGTTATTTGGCATGGAACAGGACAAA GCCTTGTGTTTGTCAGGAAGTGTTGCCAAAATGTTGTAGCTGTTGCAAACTTAGCAATGA GATCTGTGGTTTTTTGATAGATATGCCAAAATATCTATAGTGTTTGTGAAATTTACTCTA GAAAAGAGCATCTTATTTCAGTGATGCATCCTAGTTCATAGAGCTGATCTAGATGAGAAT GAATCTGTGAATGACGATTCTTGATATCTATGCAACTGATATCATGAATTTGATGTGATT CCATTTAATTTATTTCAAGAGCAGAATCAATGGGTGATTTTTAGTTCTT