Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0375500-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:15503196:15511423:1 gene:Os01g0375500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Shikimate biosynthesis protein aroDE. (Os01t0375500-00)
Sequence	ATGGAGCTAGGAGTAAATTATGTCGATATTGAATTGAAGGTTGCTGACAAATTTATCAGC TTTATTTATGGGAGTAAGCCAGAGAAGTGCAAACTTATTGTCTCGGCACATAATTATGAA AGTACTCCATCCTGTGAGGAGCTTGCAGATCTTGTGGCTAGAATACAAGCAGTTGGAGCT GATATAGTGAAAATCGCAACAACAGCTAATGACATTGTTGATGTGTCACAGATGTTCCAA GTGATGGTGCACTGCCAATCAATAGGTGCCATAAGCACTATAATTAGGAGGCCAGATGGC AAACTACTGGGCTACAATAATGACTACATTGGAGCAATTTGTGCCATTGAGGATGGCATA GGAGGTCCAGGATCAAAGAATGCTGCCGTCACACCTTTGGCTGGCAGGCTTCTTGTTGTT GTAGGTGCTGGTGGAGCTGGCAAGGCAATTGCTTACGGGGCAAAGGAGAAGGGTGCAAGA ATTGTAGTAGCAAATCGTACCTACGAAAAAGCAGTAAGTCTTGCTGCCGCGGTTGGTGGT CATGCCCTGAGATTAGCCGAGCTTGAAACTTTCAGGCCTGAAGAAGGGATGATCCTTGCT AATGCAACATCGTTGGGAATGTACCCCAATGTGGATGGCACCCCTATTCCAAAGCAAGCA CTAAGCTTCTACGATGTTGTGTTCGATGCGGTATATGCTCCGAAAGTCACCCGGCTTCTA CGAGAAGCAGAAGAATGTGGGGTTAAAGTTGTCAGCGGTGTGGAGATGTTTCTCAGACAA GCCTTGGGTCAGTTCGAGCGTTTCACAAATGGTATTGAAGCTCCTGAAAGCCTGATGCGT GAGGTATTAGCAAAACACACATAA

Peptide Sequence

PEP ID	Os01t0375500-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:15503196:15511423:1 gene:Os01g0375500 transcript:Os01t0375500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Shikimate biosynthesis protein aroDE. (Os01t0375500-00)
Sequence	MELGVNYVDIELKVADKFISFIYGSKPEKCKLIVSAHNYESTPSCEELADLVARIQAVGA DIVKIATTANDIVDVSQMFQVMVHCQSIGAISTIIRRPDGKLLGYNNDYIGAICAIEDGI GGPGSKNAAVTPLAGRLLVVVGAGGAGKAIAYGAKEKGARIVVANRTYEKAVSLAAAVGG HALRLAELETFRPEEGMILANATSLGMYPNVDGTPIPKQALSFYDVVFDAVYAPKVTRLL REAEECGVKVVSGVEMFLRQALGQFERFTNGIEAPESLMREVLAKHT

Transcript Sequence

Transcript ID	Os01t0375500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:15503196:15511423:1 gene:Os01g0375500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Shikimate biosynthesis protein aroDE. (Os01t0375500-00)
Sequence	ATGGAGCTAGGAGTAAATTATGTCGATATTGAATTGAAGGTTGCTGACAAATTTATCAGC TTTATTTATGGGAGTAAGCCAGAGAAGTGCAAACTTATTGTCTCGGCACATAATTATGAA AGTACTCCATCCTGTGAGGAGCTTGCAGATCTTGTGGCTAGAATACAAGCAGTTGGAGCT GATATAGTGAAAATCGCAACAACAGCTAATGACATTGTTGATGTGTCACAGATGTTCCAA GTGATGGTGCACTGCCAATCAATAGGTGCCATAAGCACTATAATTAGGAGGCCAGATGGC AAACTACTGGGCTACAATAATGACTACATTGGAGCAATTTGTGCCATTGAGGATGGCATA GGAGGTCCAGGATCAAAGAATGCTGCCGTCACACCTTTGGCTGGCAGGCTTCTTGTTGTT GTAGGTGCTGGTGGAGCTGGCAAGGCAATTGCTTACGGGGCAAAGGAGAAGGGTGCAAGA ATTGTAGTAGCAAATCGTACCTACGAAAAAGCAGTAAGTCTTGCTGCCGCGGTTGGTGGT CATGCCCTGAGATTAGCCGAGCTTGAAACTTTCAGGCCTGAAGAAGGGATGATCCTTGCT AATGCAACATCGTTGGGAATGTACCCCAATGTGGATGGCACCCCTATTCCAAAGCAAGCA CTAAGCTTCTACGATGTTGTGTTCGATGCGGTATATGCTCCGAAAGTCACCCGGCTTCTA CGAGAAGCAGAAGAATGTGGGGTTAAAGTTGTCAGCGGTGTGGAGATGTTTCTCAGACAA GCCTTGGGTCAGTTCGAGCGTTTCACAAATGGTATTGAAGCTCCTGAAAGCCTGATGCGT GAGGTATTAGCAAAACACACATAA