Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0375100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:15474284:15478322:-1 gene:Os01g0375100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C6 description:Similar to DnAJ-like protein slr0093. (Os01t0375100-01)
Sequence	ATGATGGAGTGCAACAAAGAAGAGGCCCTCAAGGCCAGGGATATTGCTGCAAAGAAGATG GAAAGCAAAGACTTTGTTGGTGCCAAAAGGATCGCGCTTAAAGCTCAAAGGATTTTTCCA GAGCTTGAGAACATATCCCAGATGTTAACTGTCTGTGAAGTACATTGTGCGGCAGAAGCA AAGATGAATGGACTATTGGACTTCTATGGAGTTCTCCAAGTGGATGTAATGGCGGATGAA GCAACCATTAAAAAGCAATTCCGCAAGCTTGCTTTTTCGCTTCACCCTGATAAAAACGGT TTCGCTGGCGCTGAAGCTGCTTTCAAATTAGTTGCAGAAGCTCAGTCAACATTGTCTGAT CGAACAAAACGGCGTGCATATGACATCAAATGGAGAATTGCATCAAAGCAGGCTACGCAA CCAAAGCAGGGTGCCCAACCAGCGCAGGCTGCCCAACCAAAACAGTGTACACAACCACCG CTGGCTACAAAACGAAATCAGAGTGCACAACCAACGCATAATACACAGCAGAGTGCACAG CCAAAGCAGAGTACACAACCGATGCAGGCTACTCAACCGAAGCATGCTACTGAACCAATG GAGAAAACAGATGCAAATAGAGCTAGTAATGCTAAGGAAGGATATGGATCATCAGTTCGA CCACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAG TACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGA GCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGT GCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCA GCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAAC AGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAA GGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGTAAGGCA GGGGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCTGGTAAT AGGGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGATCGGCT AGGAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAGAGGCGA ACCATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGATGATAAT GTTGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACACAACCAC CAGAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCACATGAT ACAAATGCTCAGAAGAAATCTGGCATTCCTGGGAACTTTTCCTATCCTGACCCAGAATTT TTTGACTTCGATAGGTGCAGGGATGTTAGTATGTTTGCAGTTGATCAGATCTGGGCACTT TATGATGACCGTGATGGCATGCCACGATATTATGCTCGTATAAGACGCATTGATACAACC AACTTCAGAGTTCAGTTCACTTGGCTGGAGCATGATGCAAAGAATGAGGAAGAGGACAAA TGGACTGATGAAGAATTGCCTGTGGCTTGTGGGAACTTTTTCTTAGGAAAAACAGTGGTG TCACAAGATGCCCTCATGTTTTCTCATATTGTGTCATGGGTGAAAGGTAGAAAAAGGAGC TCATACGAAATATATCCTAGGAAGGGTGAGGTATGGGCTCTATATAAGGGTTGGAGTATG CAGTGGAGCTCAGATGCAGATAAGCATAGAGCCTATGAGTATGAAGCTGTGGAGATCTTG TCAAATTTCACAGTGGAAGCTGGTGCTGCTGTTGGCCCTTTGGTAAAGATTAAAGGTTTT GTGAGTCTCTTTGCAAAAGTAAAGGAGAAACCATCATTCGTTATACCACCAAGCGAAATG CTACGGTTCTCTCACAGTATCCCATTTTTTAGAACAAAGGGAGATGAGAAGGTAGGTGTT GCTGGTGGGTTTCTTGAACTAGATACTGCATCACTTCCTAGTAACTTGGACGTAGCCTTT CCATCGGTTACTCTTGATTCTTGCATGCCTGTCTGCAAGACAATGAACAGTGGATTTAAT GATTTCACTGGATATGAGCAAGGTGCGCTGAAAGAAAATTTGATGAACGAAGGTAAACGT AAAGATCATTCCCTTGAACGAACCCCAGTGCATCAACAGAGTGCTGCCTATTCCTCCCCC AGTACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAGAATATCGATCATATAGT AAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTAC TATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAA GTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGT GGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCAT TTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGG GAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACT TTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTT TTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTG GAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACA AAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTGAT ACTTTCCTGTTCCGGAGCGGCCGCTGA

Peptide Sequence

PEP ID	Os01t0375100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:15474284:15478322:-1 gene:Os01g0375100 transcript:Os01t0375100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C6 description:Similar to DnAJ-like protein slr0093. (Os01t0375100-01)
Sequence	MMECNKEEALKARDIAAKKMESKDFVGAKRIALKAQRIFPELENISQMLTVCEVHCAAEA KMNGLLDFYGVLQVDVMADEATIKKQFRKLAFSLHPDKNGFAGAEAAFKLVAEAQSTLSD RTKRRAYDIKWRIASKQATQPKQGAQPAQAAQPKQCTQPPLATKRNQSAQPTHNTQQSAQ PKQSTQPMQATQPKHATEPMEKTDANRASNAKEGYGSSVRPPSAGEAFWTMCVNCKTKYQ YYSNVLNHKLRCQNCKKDFRAVMLNEQDVPSVFSSSAAKSAGQHCDVPKQEDCSTKFSSA ANRDAKPMVNGGQHDEQMKNSASVRAGGEGTVNHTESIRKGGLEFSTLHVSSAANVGSKA GGKMTSCPTPDVAGRQNPGNRVNTSAETGVMNIPNPRRSARRKENADASIIQDTPSKKRR TILDWFSNPDSSRKKVADDNVVRADGQACEPHVSSEAHNHQKGTTSNEGNQEKRKDVAHD TNAQKKSGIPGNFSYPDPEFFDFDRCRDVSMFAVDQIWALYDDRDGMPRYYARIRRIDTT NFRVQFTWLEHDAKNEEEDKWTDEELPVACGNFFLGKTVVSQDALMFSHIVSWVKGRKRS SYEIYPRKGEVWALYKGWSMQWSSDADKHRAYEYEAVEILSNFTVEAGAAVGPLVKIKGF VSLFAKVKEKPSFVIPPSEMLRFSHSIPFFRTKGDEKVGVAGGFLELDTASLPSNLDVAF PSVTLDSCMPVCKTMNSGFNDFTGYEQGALKENLMNEGKRKDHSLERTPVHQQSAAYSSP STFDYPNSEFHNFEEYRSYSKFERGQIWALYSDLDQFPKYYGWVTKVDTDPFRVHLTWLE VCPQLEQENMWLEQNIPVSCGTFKIRNWRIKLDTNDAFSHLVETSQVGWKRYFEIHPQVG EIWAIYNNWAPGWVPSSKDTFEYTIGEITDCTEASTKVLLLTRVDGYRAVFKPDSVRGTL EIPTNENIRFSHLIPSFRLTKENGGKLCGFYELDPASVPDTFLFRSGR

Transcript Sequence

Transcript ID	Os01t0375100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:15474284:15478322:-1 gene:Os01g0375100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C6 description:Similar to DnAJ-like protein slr0093. (Os01t0375100-01)
Sequence	GGCCTCGGCCTCCCGTCTCCTCGGCTCCTCGCCCACTTCGTCCGCCGCCTGCGCTGCGCC GAGACGCCGCCGATCCCCATCCCGCGAGCGGCGGGGCCGGCCTCCATCCCGTGACCGCGA GCAGGAGCGCCGGCGCGGGGCACGTGCTGCTGCTTCCACCAATATCATCGCCGGTGAGGG CACCCGATCTGGAAGCCTTTTTCTCTTTGCCCTAACCAATAGAAGTTCGTTTCCAAATCA AGATTTTGGGGGTTCAAGTAAACCCCCATGCCCAACGTAAGAACTTGTTAAGCCATAGGC TCTGGTTCCATATGAGAGAAGATCCATATGCTCTTTTGAGATAGTTTGGAAAATGGCATC AAAGAAAGTATAAGTGGGTTATGTCAAGAAGGCCTGTGATTTTCTAGAATCAATTTGGTG AGCCGAATGATGGAGTGCAACAAAGAAGAGGCCCTCAAGGCCAGGGATATTGCTGCAAAG AAGATGGAAAGCAAAGACTTTGTTGGTGCCAAAAGGATCGCGCTTAAAGCTCAAAGGATT TTTCCAGAGCTTGAGAACATATCCCAGATGTTAACTGTCTGTGAAGTACATTGTGCGGCA GAAGCAAAGATGAATGGACTATTGGACTTCTATGGAGTTCTCCAAGTGGATGTAATGGCG GATGAAGCAACCATTAAAAAGCAATTCCGCAAGCTTGCTTTTTCGCTTCACCCTGATAAA AACGGTTTCGCTGGCGCTGAAGCTGCTTTCAAATTAGTTGCAGAAGCTCAGTCAACATTG TCTGATCGAACAAAACGGCGTGCATATGACATCAAATGGAGAATTGCATCAAAGCAGGCT ACGCAACCAAAGCAGGGTGCCCAACCAGCGCAGGCTGCCCAACCAAAACAGTGTACACAA CCACCGCTGGCTACAAAACGAAATCAGAGTGCACAACCAACGCATAATACACAGCAGAGT GCACAGCCAAAGCAGAGTACACAACCGATGCAGGCTACTCAACCGAAGCATGCTACTGAA CCAATGGAGAAAACAGATGCAAATAGAGCTAGTAATGCTAAGGAAGGATATGGATCATCA GTTCGACCACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAA TATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGAT TTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCC AAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCT TCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATG AAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATC AGAAAAGGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGT AAGGCAGGGGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCT GGTAATAGGGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGA TCGGCTAGGAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAG AGGCGAACCATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGAT GATAATGTTGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACAC AACCACCAGAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCA CATGATACAAATGCTCAGAAGAAATCTGGCATTCCTGGGAACTTTTCCTATCCTGACCCA GAATTTTTTGACTTCGATAGGTGCAGGGATGTTAGTATGTTTGCAGTTGATCAGATCTGG GCACTTTATGATGACCGTGATGGCATGCCACGATATTATGCTCGTATAAGACGCATTGAT ACAACCAACTTCAGAGTTCAGTTCACTTGGCTGGAGCATGATGCAAAGAATGAGGAAGAG GACAAATGGACTGATGAAGAATTGCCTGTGGCTTGTGGGAACTTTTTCTTAGGAAAAACA GTGGTGTCACAAGATGCCCTCATGTTTTCTCATATTGTGTCATGGGTGAAAGGTAGAAAA AGGAGCTCATACGAAATATATCCTAGGAAGGGTGAGGTATGGGCTCTATATAAGGGTTGG AGTATGCAGTGGAGCTCAGATGCAGATAAGCATAGAGCCTATGAGTATGAAGCTGTGGAG ATCTTGTCAAATTTCACAGTGGAAGCTGGTGCTGCTGTTGGCCCTTTGGTAAAGATTAAA GGTTTTGTGAGTCTCTTTGCAAAAGTAAAGGAGAAACCATCATTCGTTATACCACCAAGC GAAATGCTACGGTTCTCTCACAGTATCCCATTTTTTAGAACAAAGGGAGATGAGAAGGTA GGTGTTGCTGGTGGGTTTCTTGAACTAGATACTGCATCACTTCCTAGTAACTTGGACGTA GCCTTTCCATCGGTTACTCTTGATTCTTGCATGCCTGTCTGCAAGACAATGAACAGTGGA TTTAATGATTTCACTGGATATGAGCAAGGTGCGCTGAAAGAAAATTTGATGAACGAAGGT AAACGTAAAGATCATTCCCTTGAACGAACCCCAGTGCATCAACAGAGTGCTGCCTATTCC TCCCCCAGTACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAGAATATCGATCA TATAGTAAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCA AAGTACTATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGG CTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTG AGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTC TCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAA GTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAG GATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTC TTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGC ACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGG CTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTT CCTGATACTTTCCTGTTCCGGAGCGGCCGCTGATTGGCAAATGTTGATGCTGACTGTCCT GGAGATAGTAAGGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGC AGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAATGTTGAGGCCTCTGTGCTCATTC AGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCATTTGGCATGTGATGCAGTGATT ATCTGGTTGTCAATTTCTCTTGAGGCGTTGCCCTGAGAGCAAATGGGAAATGTCATGCAT ACTGCAATTTTTCTGGAGCCAAGCTTCTTTTCTGGCCAGTGGTGTCATGGGCCTGTGCTC AAAGAAGTATTGCAACCTGTAACATATAGGTTGCTTCTTGCTGTGCTTTAATATATTTGT GCCCTTTCATTTGGTAGG