Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0374200-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:15418911:15421118:-1 gene:Os01g0374200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0374200-00)
Sequence	ATGGCAGCCGCGGCGCCCTCGTCGGCGCGGCGAATGTCGCACACGCAGTTCATCGAGCTC CTCCGCCGGCGCGCCTCCTGCCCTCGCCACGGCGAGGCCCTCCACGCCTGGGCGCTCAAG TCCGGCGCCGCCTCCCACGCGCCCGTCGCCAACTCCCTCATCAACTTCTACTCCTCGCTC CCCCGGCCCCTCCTCGCCGCCGCCTTCGCGGTGTTCGACGATATCCCTCCCGCCGCCCGC GACGTCACCTCCTGGAACTCCCTCCTCAACCCGCTCTCCGGCCACCGCCCGCTCGACGCG CTCTCCCGCTTCCGCTCCATGCTCTCCTCCTCCACCGTCCTTCCGTCGCCCCATTCCTTC GCTGCCGCCTTCACCGCCGCCGCCCGTGCGGCCTCCGCGCCCGCCGGCACCGCGGCCCAC GCTCTCGCTTGCAAGATCCCCTCTGCCGTATCCAATGTGTACGTGTGCACCAGCCTGCTC AACATGTACTGTAAGCTGGGCATTGTTTCTGATGCTCGCAGAGTGTTCGACGGAATGCCT CAGCGCAACTCATTTTCCTGGTCCACCATGGTGGCAGGTTATGCTGCAGAGAAATGCTCC GAGGAGGCATTCGATCTCTTCCGACTAATGCTCGAAGAGTGCCCTTCTGAGAAAAGCGAG TTTGTTGCCACAGCAGTTCTCAGCGCAGTTAGTGTGCCATTGGGTTTGCTGATGGGGGAG CAGATGCATGGACTGATTGTGAAGGATGGGTTGCTGGATTTTGTATCTGTGGAAAACTCG CTTGTCACGATGTATGCGAAGGCTGGGTGTATGGGTGCTGCGTTTCATGTGTTTGAGTCA TCGAGGGAGAGGAATTCGATCACTTGGTCGGCGATGATTACTGGGTATGCACAAAATGGT GAGGCAGACAGTGCAGTTAGTATGTTCTCACAGATGCATGCTGCTGGGTTCACACCAACA GAGTTCACTTTTGTTGGGGTTCTCAATGCAAGTAGTGATTTGGGAGCATTGGCAGTAGGG AAGCAAGCCCACGGTTTGATGGTGAAGCTTGGGTTTGAGGTTCAGATATATGTGAAGAGT GCACTGGTGGACATGTATGCAAAATGTGGTTGTATTGCTGACGCAAAAGAAGGGTTTGAT CAGTTGTACGAGGTTGACATTGTCCTTTGGACAGCGATGGTTTCTGGGCATGTGCAGAAT GGGGAGCACGAGGAAGCCCTGACATTGTATGCCAGGATGGACAAGGAAGGTATCATCCCC AGTAAATCGACTATAGCTAGTGGTCTGAGAGCATGTGCTGGCATTGCAGCACTGGAACCA GGGAAACAATTGCACACGCAAATCGTGAAATATGGGTTAGGTTTGGGGGCCCCTGTTGGA AGTGCCTTGTCTACGATGTATTCAAAGTGTGGGAACCTTGAAGATGGCATGTCTGTCTTC AGAAGGATTCCTGATAGGGATGTTATTGCATGGAACTCAATCATTTCTGGTTTTTCACAA AATGGGTGTGGCAATGGTGCACTGGATCTTTTTGAAGAAATGAAGATGGAGGGCACTATA CCTGATAATATAACATTCATTAATATATTGTGTGCTTGCAGTCATATGGGTCTAGTTGAC AGAGGATGGGAATATTTTAGTTTAATGACAAAAGATTATGGTTTAACTCCTAGGCTGGAT CACTATGCTTGCATGGTTGATATTCTTAGCCGAGCAGGGATGCTTAAGGAAGCAAAGGAT TTCATAGAGTCCATTACTATTGACCACGGAACATGTTTGTGGCGTATAGTACTAGGAGCA TGTCGCTCTTTGCGAGATTTTGATGTCGGAGCATATGCTGGTGAACGGTTGATGGAGTTA GGTACCGGAGATTCCTCAGCATATATATTGCTGTCAAACATCTATGCTTCCCAGAGAAAA TGGAATGATGTTGAAAGGGTGAGGCATTTGATGAGACTTCGAGGAGTTAACAAAGATCCT GGATGTAGCTGGGTTGAGCTTAACAGCCGAGTTCATGTGTTTGTAGTTGGCGAACAGCAG CATCCTGAAGCAGAAAATATAAATGCACAGCTGAGAAGGCTAGCTAAACACATGAAGGAT GAAGGTTACCACTCATCATCTAAGTTATCGTTTGATGAAGAGCTGGGTCCATTGGCAGAA TCTCATGAAGAAGATCAACTGGAATGGATATCTGCAGCTTATAGCTGA

Peptide Sequence

PEP ID	Os01t0374200-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:15418911:15421118:-1 gene:Os01g0374200 transcript:Os01t0374200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0374200-00)
Sequence	MAAAAPSSARRMSHTQFIELLRRRASCPRHGEALHAWALKSGAASHAPVANSLINFYSSL PRPLLAAAFAVFDDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSF AAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMP QRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGE QMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNG EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKS ALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD RGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGA CRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDP GCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGYHSSSKLSFDEELGPLAE SHEEDQLEWISAAYS

Transcript Sequence

Transcript ID	Os01t0374200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:15418911:15421118:-1 gene:Os01g0374200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0374200-00)
Sequence	ATGGCAGCCGCGGCGCCCTCGTCGGCGCGGCGAATGTCGCACACGCAGTTCATCGAGCTC CTCCGCCGGCGCGCCTCCTGCCCTCGCCACGGCGAGGCCCTCCACGCCTGGGCGCTCAAG TCCGGCGCCGCCTCCCACGCGCCCGTCGCCAACTCCCTCATCAACTTCTACTCCTCGCTC CCCCGGCCCCTCCTCGCCGCCGCCTTCGCGGTGTTCGACGATATCCCTCCCGCCGCCCGC GACGTCACCTCCTGGAACTCCCTCCTCAACCCGCTCTCCGGCCACCGCCCGCTCGACGCG CTCTCCCGCTTCCGCTCCATGCTCTCCTCCTCCACCGTCCTTCCGTCGCCCCATTCCTTC GCTGCCGCCTTCACCGCCGCCGCCCGTGCGGCCTCCGCGCCCGCCGGCACCGCGGCCCAC GCTCTCGCTTGCAAGATCCCCTCTGCCGTATCCAATGTGTACGTGTGCACCAGCCTGCTC AACATGTACTGTAAGCTGGGCATTGTTTCTGATGCTCGCAGAGTGTTCGACGGAATGCCT CAGCGCAACTCATTTTCCTGGTCCACCATGGTGGCAGGTTATGCTGCAGAGAAATGCTCC GAGGAGGCATTCGATCTCTTCCGACTAATGCTCGAAGAGTGCCCTTCTGAGAAAAGCGAG TTTGTTGCCACAGCAGTTCTCAGCGCAGTTAGTGTGCCATTGGGTTTGCTGATGGGGGAG CAGATGCATGGACTGATTGTGAAGGATGGGTTGCTGGATTTTGTATCTGTGGAAAACTCG CTTGTCACGATGTATGCGAAGGCTGGGTGTATGGGTGCTGCGTTTCATGTGTTTGAGTCA TCGAGGGAGAGGAATTCGATCACTTGGTCGGCGATGATTACTGGGTATGCACAAAATGGT GAGGCAGACAGTGCAGTTAGTATGTTCTCACAGATGCATGCTGCTGGGTTCACACCAACA GAGTTCACTTTTGTTGGGGTTCTCAATGCAAGTAGTGATTTGGGAGCATTGGCAGTAGGG AAGCAAGCCCACGGTTTGATGGTGAAGCTTGGGTTTGAGGTTCAGATATATGTGAAGAGT GCACTGGTGGACATGTATGCAAAATGTGGTTGTATTGCTGACGCAAAAGAAGGGTTTGAT CAGTTGTACGAGGTTGACATTGTCCTTTGGACAGCGATGGTTTCTGGGCATGTGCAGAAT GGGGAGCACGAGGAAGCCCTGACATTGTATGCCAGGATGGACAAGGAAGGTATCATCCCC AGTAAATCGACTATAGCTAGTGGTCTGAGAGCATGTGCTGGCATTGCAGCACTGGAACCA GGGAAACAATTGCACACGCAAATCGTGAAATATGGGTTAGGTTTGGGGGCCCCTGTTGGA AGTGCCTTGTCTACGATGTATTCAAAGTGTGGGAACCTTGAAGATGGCATGTCTGTCTTC AGAAGGATTCCTGATAGGGATGTTATTGCATGGAACTCAATCATTTCTGGTTTTTCACAA AATGGGTGTGGCAATGGTGCACTGGATCTTTTTGAAGAAATGAAGATGGAGGGCACTATA CCTGATAATATAACATTCATTAATATATTGTGTGCTTGCAGTCATATGGGTCTAGTTGAC AGAGGATGGGAATATTTTAGTTTAATGACAAAAGATTATGGTTTAACTCCTAGGCTGGAT CACTATGCTTGCATGGTTGATATTCTTAGCCGAGCAGGGATGCTTAAGGAAGCAAAGGAT TTCATAGAGTCCATTACTATTGACCACGGAACATGTTTGTGGCGTATAGTACTAGGAGCA TGTCGCTCTTTGCGAGATTTTGATGTCGGAGCATATGCTGGTGAACGGTTGATGGAGTTA GGTACCGGAGATTCCTCAGCATATATATTGCTGTCAAACATCTATGCTTCCCAGAGAAAA TGGAATGATGTTGAAAGGGTGAGGCATTTGATGAGACTTCGAGGAGTTAACAAAGATCCT GGATGTAGCTGGGTTGAGCTTAACAGCCGAGTTCATGTGTTTGTAGTTGGCGAACAGCAG CATCCTGAAGCAGAAAATATAAATGCACAGCTGAGAAGGCTAGCTAAACACATGAAGGAT GAAGGTTACCACTCATCATCTAAGTTATCGTTTGATGAAGAGCTGGGTCCATTGGCAGAA TCTCATGAAGAAGATCAACTGGAATGGATATCTGCAGCTTATAGCTGA