Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0372700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:15356785:15360682:-1 gene:Os01g0372700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Asparaginyl-tRNA synthetase, cytoplasmic 1 (EC 6.1.1.22) (Asparagine-- tRNA ligase 1) (AsnRS 1). (Os01t0372700-01)
Sequence	ATGGCCGAAGACGCCGCGGCGGCCGCCATGGCCGCGGCCTCCCTCTCCGACGACCTGGAG CCCGCCACCGACCGCACCCGCATCCGATCCATCCTGGCCGACGGCGCCGCGCGCGCCGGC GAGCGCGTCGTCGTGGGCGGGTGGGTCAAGACCGGGCGGGAGCAGGGGAAAGGCACCTTC GCCTTCCTCGAGCTCAACGATGGCTCCTGCGCCTCCAACCTGCAGGTCCTCGTCGACGCC GCCGTCCACCCGCTCGCGCCGCTCACCGCCACGGGCACGTCCGTGCTCGTCGAGGGCGAG CTCAAGAAGCCGCCGGAGGGCGCCAAGCAGCGCGTCGAGCTCCGCGTCGACCGCGTCATC GAGGTCGGCGAGGTCGACCCCGCCGCCTACCCGCTGCCCAAGACCAAGCTCACGCTCGAG AATCTCAGGGACGTCGTCCATCTCCGCTCCCGCACCAACACGATTGGTGCTGTTGCGCGT ATTAGACACCAGCTAGCCTGTGCAACACACAGGTTTTTTGATGAGAATGGTTTTCTTTAT GTGCACACACCAATAATAACTACAAGTGATTGTGAGGGTGCTGGTGAGATGTTTCAAGTG ACGACTTTGTTCAGCCATGCTGAAAAGGTGGAGAAGGAATTGAAAGAGAACCCTGCACCA TCAGAGTCTGATATTGAGGCAGCTAGAGTTGTTGTCAAGGAAAAAGGTGATGCGGTTGCA CAGCTTAAAGCTGCAAAAGCTAGCAAACAAGAAATCACAGCTGCTGTTGCTGAGCTTAAC AAGGCAAAAGAAAATGTCTCAAGGCTGGAGGAAAGATCTAAGTTGAAGCCCGGAATTCCG TACAGAGATGATGGGACAGTAGCTTATGAGAATGACTTCTTCAAACGCCAGGCTTTTCTG ACTGTGTCTGGACAGCTTCAAGTTGAGACCTATGCATGTGCTCTTAGCAGTGTTTATACC TTTGGACCAACATTCCGTGCAGAAAACTCCCATACATCACGACATTTGGCAGAGTTTTGG ATGGTTGAACCAGAAATCGCATTTGCTAACTTGCAGGATGATATGAACTGTGCAGAAAGA TATGTACAGTACCTTTGCAAGTGGCTTCTTGAGCATTGCCGGGAAGACATGGAATTCATG GTGAAAAATTACGATAAGACTGCAATTGAGCGTCTGGAGCTTGTTTCCTCGACACCTTTT CAGCGCATTTCATATACAAAAGCTGTTGAGCTATTGAAAAATGTCACTGATAAGAAATTC GAAAACAAGGTTGAATGGGGAATTGATTTAGCTTCAGAGCATGAAAGGTATTTAACCGAG GTGATATTTAAGAAGCCGGTGATTGTTTATAACTATCCCAAAGAAATAAAGGCATTTTAT ATGAGACTCAATGATGATCAGAAGACTGTAGCTGCTATGGATGTTCTTGTGCCCAAGGTT GGTGAGTTGGTTGGTGGAAGCCAAAGGGAGGAACGTCTGGACCTTCTCAAAACAAGGATA CAAGACGCCGGGTTGCCTTTGGAGCCATATGAATGGTACTTGGACCTCCGCCGCTTTGGA TCTGTCAAGCACAGTGGTTTTGGTTTGGGTTTTGAAAGAATGATTCTTTTTGCCACTGGT TTGGAGAACATCAGAGATGTCATCCCCTTCCCTAGATACCCAGGGAGGGCTGATCTCTAA

Peptide Sequence

PEP ID	Os01t0372700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:15356785:15360682:-1 gene:Os01g0372700 transcript:Os01t0372700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Asparaginyl-tRNA synthetase, cytoplasmic 1 (EC 6.1.1.22) (Asparagine-- tRNA ligase 1) (AsnRS 1). (Os01t0372700-01)
Sequence	MAEDAAAAAMAAASLSDDLEPATDRTRIRSILADGAARAGERVVVGGWVKTGREQGKGTF AFLELNDGSCASNLQVLVDAAVHPLAPLTATGTSVLVEGELKKPPEGAKQRVELRVDRVI EVGEVDPAAYPLPKTKLTLENLRDVVHLRSRTNTIGAVARIRHQLACATHRFFDENGFLY VHTPIITTSDCEGAGEMFQVTTLFSHAEKVEKELKENPAPSESDIEAARVVVKEKGDAVA QLKAAKASKQEITAAVAELNKAKENVSRLEERSKLKPGIPYRDDGTVAYENDFFKRQAFL TVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFANLQDDMNCAER YVQYLCKWLLEHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTKAVELLKNVTDKKF ENKVEWGIDLASEHERYLTEVIFKKPVIVYNYPKEIKAFYMRLNDDQKTVAAMDVLVPKV GELVGGSQREERLDLLKTRIQDAGLPLEPYEWYLDLRRFGSVKHSGFGLGFERMILFATG LENIRDVIPFPRYPGRADL

Transcript Sequence

Transcript ID	Os01t0372700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:15356785:15360682:-1 gene:Os01g0372700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Asparaginyl-tRNA synthetase, cytoplasmic 1 (EC 6.1.1.22) (Asparagine-- tRNA ligase 1) (AsnRS 1). (Os01t0372700-01)
Sequence	CTACATTCTCCACCTCTCCACCATTCCAAACTGCCAAGTGGCAACAAACCTACTACTAAA CCCTAAAAATCCCAATTCCCACCCGACCCGACACCACTCCTCTCCTCCTCCGCCGCCGCC GCCGCCTCCTCCCAAACCCTCCCCTCCCCCATGGCCGAAGACGCCGCGGCGGCCGCCATG GCCGCGGCCTCCCTCTCCGACGACCTGGAGCCCGCCACCGACCGCACCCGCATCCGATCC ATCCTGGCCGACGGCGCCGCGCGCGCCGGCGAGCGCGTCGTCGTGGGCGGGTGGGTCAAG ACCGGGCGGGAGCAGGGGAAAGGCACCTTCGCCTTCCTCGAGCTCAACGATGGCTCCTGC GCCTCCAACCTGCAGGTCCTCGTCGACGCCGCCGTCCACCCGCTCGCGCCGCTCACCGCC ACGGGCACGTCCGTGCTCGTCGAGGGCGAGCTCAAGAAGCCGCCGGAGGGCGCCAAGCAG CGCGTCGAGCTCCGCGTCGACCGCGTCATCGAGGTCGGCGAGGTCGACCCCGCCGCCTAC CCGCTGCCCAAGACCAAGCTCACGCTCGAGAATCTCAGGGACGTCGTCCATCTCCGCTCC CGCACCAACACGATTGGTGCTGTTGCGCGTATTAGACACCAGCTAGCCTGTGCAACACAC AGGTTTTTTGATGAGAATGGTTTTCTTTATGTGCACACACCAATAATAACTACAAGTGAT TGTGAGGGTGCTGGTGAGATGTTTCAAGTGACGACTTTGTTCAGCCATGCTGAAAAGGTG GAGAAGGAATTGAAAGAGAACCCTGCACCATCAGAGTCTGATATTGAGGCAGCTAGAGTT GTTGTCAAGGAAAAAGGTGATGCGGTTGCACAGCTTAAAGCTGCAAAAGCTAGCAAACAA GAAATCACAGCTGCTGTTGCTGAGCTTAACAAGGCAAAAGAAAATGTCTCAAGGCTGGAG GAAAGATCTAAGTTGAAGCCCGGAATTCCGTACAGAGATGATGGGACAGTAGCTTATGAG AATGACTTCTTCAAACGCCAGGCTTTTCTGACTGTGTCTGGACAGCTTCAAGTTGAGACC TATGCATGTGCTCTTAGCAGTGTTTATACCTTTGGACCAACATTCCGTGCAGAAAACTCC CATACATCACGACATTTGGCAGAGTTTTGGATGGTTGAACCAGAAATCGCATTTGCTAAC TTGCAGGATGATATGAACTGTGCAGAAAGATATGTACAGTACCTTTGCAAGTGGCTTCTT GAGCATTGCCGGGAAGACATGGAATTCATGGTGAAAAATTACGATAAGACTGCAATTGAG CGTCTGGAGCTTGTTTCCTCGACACCTTTTCAGCGCATTTCATATACAAAAGCTGTTGAG CTATTGAAAAATGTCACTGATAAGAAATTCGAAAACAAGGTTGAATGGGGAATTGATTTA GCTTCAGAGCATGAAAGGTATTTAACCGAGGTGATATTTAAGAAGCCGGTGATTGTTTAT AACTATCCCAAAGAAATAAAGGCATTTTATATGAGACTCAATGATGATCAGAAGACTGTA GCTGCTATGGATGTTCTTGTGCCCAAGGTTGGTGAGTTGGTTGGTGGAAGCCAAAGGGAG GAACGTCTGGACCTTCTCAAAACAAGGATACAAGACGCCGGGTTGCCTTTGGAGCCATAT GAATGGTACTTGGACCTCCGCCGCTTTGGATCTGTCAAGCACAGTGGTTTTGGTTTGGGT TTTGAAAGAATGATTCTTTTTGCCACTGGTTTGGAGAACATCAGAGATGTCATCCCCTTC CCTAGATACCCAGGGAGGGCTGATCTCTAAAATAACCAGAGAAAGCTGGATTCTAAAGTT CTTCTCGCTGTCCTGTTAGCTCCTCAATTTCAGGTCTACAAATGTGCACTGATATATTTC GTGTCAGCTTGGTTGTAATAGATGCTCACCATGTATTTAGTTATTTGCCACTACAGCATA TGAACGACCAATTTACTCATTTTTGCGATAGTTGAACATTTTAGAAGTTTTGTTCAAAGC AAGATCTATTTGTACTCGTTAATTGTTACAAAACGTGGTTTTGCAGGTTTGAAGTCATAA CCGCTACATTTTC